BLASTX nr result
ID: Coptis25_contig00007097
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007097 (578 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW77598.1| putative translation elongation factor Tu family ... 88 2e-22 ref|XP_004143833.1| PREDICTED: uncharacterized protein LOC101220... 88 5e-22 ref|XP_004157309.1| PREDICTED: elongation factor 1-alpha-like [C... 88 5e-22 gb|ABK94386.1| unknown [Populus trichocarpa] 88 5e-22 ref|XP_003536361.1| PREDICTED: elongation factor 1-alpha-like is... 88 5e-22 >gb|AFW77598.1| putative translation elongation factor Tu family protein [Zea mays] Length = 167 Score = 88.2 bits (217), Expect(2) = 2e-22 Identities = 43/50 (86%), Positives = 46/50 (92%) Frame = +1 Query: 1 TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150 TVIDAPGH DFI++MITGTSQA+ VLIIDSTTGGFEAG SKDGQTREHA Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137 Score = 43.1 bits (100), Expect(2) = 2e-22 Identities = 20/27 (74%), Positives = 22/27 (81%) Frame = +3 Query: 201 GQTREHALLAFTLRVRQMIS*CNMIVF 281 GQTREHALLAFTL V+QMI CN + F Sbjct: 131 GQTREHALLAFTLGVKQMICCCNKVCF 157 >ref|XP_004143833.1| PREDICTED: uncharacterized protein LOC101220517 [Cucumis sativus] Length = 933 Score = 88.2 bits (217), Expect(2) = 5e-22 Identities = 43/50 (86%), Positives = 46/50 (92%) Frame = +1 Query: 1 TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150 TVIDAPGH DFI++MITGTSQA+ VLIIDSTTGGFEAG SKDGQTREHA Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137 Score = 41.6 bits (96), Expect(2) = 5e-22 Identities = 20/23 (86%), Positives = 20/23 (86%) Frame = +3 Query: 201 GQTREHALLAFTLRVRQMIS*CN 269 GQTREHALLAFTL VRQMI CN Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153 Score = 88.2 bits (217), Expect(2) = 1e-21 Identities = 43/50 (86%), Positives = 46/50 (92%) Frame = +1 Query: 1 TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150 TVIDAPGH DFI++MITGTSQA+ VLIIDSTTGGFEAG SKDGQTREHA Sbjct: 572 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 621 Score = 40.4 bits (93), Expect(2) = 1e-21 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = +3 Query: 201 GQTREHALLAFTLRVRQMIS*CN 269 GQTREHALLAFTL V+QMI CN Sbjct: 615 GQTREHALLAFTLGVKQMICCCN 637 >ref|XP_004157309.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus] Length = 449 Score = 88.2 bits (217), Expect(2) = 5e-22 Identities = 43/50 (86%), Positives = 46/50 (92%) Frame = +1 Query: 1 TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150 TVIDAPGH DFI++MITGTSQA+ VLIIDSTTGGFEAG SKDGQTREHA Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137 Score = 41.6 bits (96), Expect(2) = 5e-22 Identities = 20/23 (86%), Positives = 20/23 (86%) Frame = +3 Query: 201 GQTREHALLAFTLRVRQMIS*CN 269 GQTREHALLAFTL VRQMI CN Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153 >gb|ABK94386.1| unknown [Populus trichocarpa] Length = 449 Score = 88.2 bits (217), Expect(2) = 5e-22 Identities = 43/50 (86%), Positives = 46/50 (92%) Frame = +1 Query: 1 TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150 TVIDAPGH DFI++MITGTSQA+ VLIIDSTTGGFEAG SKDGQTREHA Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137 Score = 41.6 bits (96), Expect(2) = 5e-22 Identities = 20/23 (86%), Positives = 20/23 (86%) Frame = +3 Query: 201 GQTREHALLAFTLRVRQMIS*CN 269 GQTREHALLAFTL VRQMI CN Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153 >ref|XP_003536361.1| PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max] gi|356535660|ref|XP_003536362.1| PREDICTED: elongation factor 1-alpha-like isoform 2 [Glycine max] gi|356535662|ref|XP_003536363.1| PREDICTED: elongation factor 1-alpha-like isoform 3 [Glycine max] gi|356535664|ref|XP_003536364.1| PREDICTED: elongation factor 1-alpha-like isoform 4 [Glycine max] gi|356535666|ref|XP_003536365.1| PREDICTED: elongation factor 1-alpha-like isoform 5 [Glycine max] gi|356535668|ref|XP_003536366.1| PREDICTED: elongation factor 1-alpha-like isoform 6 [Glycine max] Length = 448 Score = 88.2 bits (217), Expect(2) = 5e-22 Identities = 43/50 (86%), Positives = 46/50 (92%) Frame = +1 Query: 1 TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150 TVIDAPGH DFI++MITGTSQA+ VLIIDSTTGGFEAG SKDGQTREHA Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137 Score = 41.6 bits (96), Expect(2) = 5e-22 Identities = 20/23 (86%), Positives = 20/23 (86%) Frame = +3 Query: 201 GQTREHALLAFTLRVRQMIS*CN 269 GQTREHALLAFTL VRQMI CN Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153