BLASTX nr result

ID: Coptis25_contig00007097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007097
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW77598.1| putative translation elongation factor Tu family ...    88   2e-22
ref|XP_004143833.1| PREDICTED: uncharacterized protein LOC101220...    88   5e-22
ref|XP_004157309.1| PREDICTED: elongation factor 1-alpha-like [C...    88   5e-22
gb|ABK94386.1| unknown [Populus trichocarpa]                           88   5e-22
ref|XP_003536361.1| PREDICTED: elongation factor 1-alpha-like is...    88   5e-22

>gb|AFW77598.1| putative translation elongation factor Tu family protein [Zea mays]
          Length = 167

 Score = 88.2 bits (217), Expect(2) = 2e-22
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150
           TVIDAPGH DFI++MITGTSQA+  VLIIDSTTGGFEAG SKDGQTREHA
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137



 Score = 43.1 bits (100), Expect(2) = 2e-22
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +3

Query: 201 GQTREHALLAFTLRVRQMIS*CNMIVF 281
           GQTREHALLAFTL V+QMI  CN + F
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNKVCF 157


>ref|XP_004143833.1| PREDICTED: uncharacterized protein LOC101220517 [Cucumis sativus]
          Length = 933

 Score = 88.2 bits (217), Expect(2) = 5e-22
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150
           TVIDAPGH DFI++MITGTSQA+  VLIIDSTTGGFEAG SKDGQTREHA
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137



 Score = 41.6 bits (96), Expect(2) = 5e-22
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +3

Query: 201 GQTREHALLAFTLRVRQMIS*CN 269
           GQTREHALLAFTL VRQMI  CN
Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153



 Score = 88.2 bits (217), Expect(2) = 1e-21
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150
           TVIDAPGH DFI++MITGTSQA+  VLIIDSTTGGFEAG SKDGQTREHA
Sbjct: 572 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 621



 Score = 40.4 bits (93), Expect(2) = 1e-21
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +3

Query: 201 GQTREHALLAFTLRVRQMIS*CN 269
           GQTREHALLAFTL V+QMI  CN
Sbjct: 615 GQTREHALLAFTLGVKQMICCCN 637


>ref|XP_004157309.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus]
          Length = 449

 Score = 88.2 bits (217), Expect(2) = 5e-22
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150
           TVIDAPGH DFI++MITGTSQA+  VLIIDSTTGGFEAG SKDGQTREHA
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137



 Score = 41.6 bits (96), Expect(2) = 5e-22
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +3

Query: 201 GQTREHALLAFTLRVRQMIS*CN 269
           GQTREHALLAFTL VRQMI  CN
Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153


>gb|ABK94386.1| unknown [Populus trichocarpa]
          Length = 449

 Score = 88.2 bits (217), Expect(2) = 5e-22
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150
           TVIDAPGH DFI++MITGTSQA+  VLIIDSTTGGFEAG SKDGQTREHA
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137



 Score = 41.6 bits (96), Expect(2) = 5e-22
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +3

Query: 201 GQTREHALLAFTLRVRQMIS*CN 269
           GQTREHALLAFTL VRQMI  CN
Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153


>ref|XP_003536361.1| PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max]
           gi|356535660|ref|XP_003536362.1| PREDICTED: elongation
           factor 1-alpha-like isoform 2 [Glycine max]
           gi|356535662|ref|XP_003536363.1| PREDICTED: elongation
           factor 1-alpha-like isoform 3 [Glycine max]
           gi|356535664|ref|XP_003536364.1| PREDICTED: elongation
           factor 1-alpha-like isoform 4 [Glycine max]
           gi|356535666|ref|XP_003536365.1| PREDICTED: elongation
           factor 1-alpha-like isoform 5 [Glycine max]
           gi|356535668|ref|XP_003536366.1| PREDICTED: elongation
           factor 1-alpha-like isoform 6 [Glycine max]
          Length = 448

 Score = 88.2 bits (217), Expect(2) = 5e-22
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   TVIDAPGHCDFIQSMITGTSQANRTVLIIDSTTGGFEAGFSKDGQTREHA 150
           TVIDAPGH DFI++MITGTSQA+  VLIIDSTTGGFEAG SKDGQTREHA
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHA 137



 Score = 41.6 bits (96), Expect(2) = 5e-22
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = +3

Query: 201 GQTREHALLAFTLRVRQMIS*CN 269
           GQTREHALLAFTL VRQMI  CN
Sbjct: 131 GQTREHALLAFTLGVRQMICCCN 153


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