BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007089
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   163   2e-38
ref|XP_002514567.1| pentatricopeptide repeat-containing protein,...   160   8e-38
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   160   1e-37
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   155   4e-36

>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/91 (85%), Positives = 88/91 (96%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           +LVGYGQNG SEEA+R+FC+MQRNG+EPD+FTLGSVISSCANLASLEEGAQFH QALV G
Sbjct: 342 MLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSG 401

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
           LISFITVSNAL+TLYGKCGSIEDS++LF+EM
Sbjct: 402 LISFITVSNALITLYGKCGSIEDSNQLFDEM 432



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/91 (36%), Positives = 56/91 (61%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           ++ G  QNGL  EAM +F +M++ G+  D++T GSV+++C  L +L+EG + H+  +  G
Sbjct: 241 MITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG 300

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
               + V +ALV +Y KC S+  +  +F  M
Sbjct: 301 YNHNVFVGSALVDMYCKCRSVRYAEAVFKRM 331



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQ-FHSQALVL 105
           L+ GY Q G + E + +F  M   G++PD  T  +V+S+C+    +E G Q F S     
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDH 502

Query: 104 GLISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
           G+I F      ++ L+G+ G +E++    N+M
Sbjct: 503 GIIPFSDHYTCMIDLFGRAGRLEEAKNFINKM 534


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/91 (85%), Positives = 87/91 (95%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           +LVGYGQNG SEEA++IFC+MQ NG+EPD+FTLGSVISSCANLASLEEGAQFH +ALV G
Sbjct: 346 MLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSG 405

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
           LISFITVSNALVTLYGKCGSIEDSH+LF+EM
Sbjct: 406 LISFITVSNALVTLYGKCGSIEDSHRLFSEM 436



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/92 (36%), Positives = 58/92 (63%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           ++ G+ QNGL  EA+ +F EM+   +E D++T GSV+++C  + +L+EG Q H+  +   
Sbjct: 245 MIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 304

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEMH 6
               I V +ALV +Y KC SI+ +  +F +M+
Sbjct: 305 YQDNIFVGSALVDMYCKCKSIKSAETVFRKMN 336


>ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546171|gb|EEF47673.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/92 (83%), Positives = 87/92 (94%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           +LVGYGQNG SEEA+++FC+MQRNG+EPD+FTLGSVISSCANLASLEEGAQFH +ALV G
Sbjct: 345 ILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSG 404

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEMH 6
           LIS ITVSNALVTLYGKCGSIEDS +LFNEM+
Sbjct: 405 LISSITVSNALVTLYGKCGSIEDSDRLFNEMN 436



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/91 (35%), Positives = 53/91 (58%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           ++ G  QNGL EEA+  F +M+ +G+  D++T GSV+++C  L +L EG Q H+  +   
Sbjct: 244 MITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSD 303

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
               + V +ALV +Y KC  +  +  +F  M
Sbjct: 304 CTDNVFVGSALVDMYCKCKILRYAEAVFKRM 334


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/93 (83%), Positives = 87/93 (93%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           +LVGYGQNG SEEA++IF EMQRNGVEPD+FTLGSVISSCANLASLEEGAQFH +ALV G
Sbjct: 342 MLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSG 401

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEMHI 3
           LISFITVSNAL+TLYGKCGS E+SH+LF EM+I
Sbjct: 402 LISFITVSNALITLYGKCGSTENSHRLFTEMNI 434



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/91 (38%), Positives = 54/91 (59%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           ++ G  QNGL  EA+ +F EM+  G   D+FT GSV+++C +L +L EG Q H+  +   
Sbjct: 241 MITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD 300

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
               + V +ALV +Y KC SI+ +  +F  M
Sbjct: 301 HKDNVFVGSALVDMYSKCRSIKSAETVFKRM 331



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQ-FHSQALVL 105
           LL GY Q G + E + +F  M  +G++PD  T   V+S+C+    +E+G Q F S     
Sbjct: 443 LLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEH 502

Query: 104 GLISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
           G++  +     ++ L G+ G +E++    N M
Sbjct: 503 GIMPIVDHCTCIIDLLGRAGRLEEARNFINNM 534


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/93 (78%), Positives = 84/93 (90%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           +LVGYGQNG SEEA+RIFC+MQRN + PD+FTLGSVISSCANLASLEEGAQFH QAL  G
Sbjct: 342 MLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASG 401

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEMHI 3
           LI F+TVSNAL+TLYGKCGS+E +H+LF+EM I
Sbjct: 402 LICFVTVSNALITLYGKCGSLEHAHQLFHEMKI 434



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/91 (35%), Positives = 53/91 (58%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQALVLG 102
           ++ G  QNGL +EA+  F EM   G   D+FT GSV+++C    +L+EG Q H+  +   
Sbjct: 241 IITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTD 300

Query: 101 LISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
               I V +AL+ +Y KC +++ +  +F +M
Sbjct: 301 YQDNIFVGSALLDMYCKCRNVKYAEAVFRKM 331



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -3

Query: 281 LLVGYGQNGLSEEAMRIFCEMQRNG-VEPDEFTLGSVISSCANLASLEEGAQFHSQALVL 105
           LL GY  NGL  E++R++  M ++G V  +  T  +++   +N   ++ G Q H Q    
Sbjct: 108 LLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKF 167

Query: 104 GLISFITVSNALVTLYGKCGSIEDSHKLFNEM 9
           G  S++ V + LV +Y K G I D++++F E+
Sbjct: 168 GYQSYLFVGSPLVDMYAKTGFINDANRIFEEI 199