BLASTX nr result

ID: Coptis25_contig00007083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007083
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276342.1| PREDICTED: autophagy-related protein 3 [Viti...   183   6e-88
ref|XP_002326609.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-86
ref|XP_002510982.1| conserved hypothetical protein [Ricinus comm...   177   4e-85
ref|XP_002303487.1| predicted protein [Populus trichocarpa] gi|2...   168   7e-83
ref|XP_002866439.1| autophagy 3 [Arabidopsis lyrata subsp. lyrat...   164   6e-81

>ref|XP_002276342.1| PREDICTED: autophagy-related protein 3 [Vitis vinifera]
           gi|297734579|emb|CBI16630.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  183 bits (465), Expect(2) = 6e-88
 Identities = 86/105 (81%), Positives = 94/105 (89%)
 Frame = -1

Query: 316 VLIDNEENDGWLATHGKPKETKCDEEENLPSMETLEISKSKTIQSMPSYFGGEEEEDIPD 137
           VL+DNE+NDGWLATHGKPKETK D EENLPSMETL+ISK KTI+S+P+YFGGEEEEDIPD
Sbjct: 98  VLLDNEDNDGWLATHGKPKETKGDAEENLPSMETLDISKDKTIKSIPTYFGGEEEEDIPD 157

Query: 136 MLGYEEPDNLIETDEATFQSTYLVAHEPDDDNILRTRTYDVSITY 2
           M  YEE DN++E D AT Q  YLVAHEPDDDNILRTRTYDVSITY
Sbjct: 158 MADYEETDNVVEADAATLQMPYLVAHEPDDDNILRTRTYDVSITY 202



 Score =  167 bits (424), Expect(2) = 6e-88
 Identities = 79/86 (91%), Positives = 83/86 (96%)
 Frame = -2

Query: 678 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 499
           MVL+QK+HEAFKGTVERITGPRTVSAFKEKGVLS+ EF+IAGDNLVSKCPTWSWESGEP 
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVTEFVIAGDNLVSKCPTWSWESGEPG 60

Query: 498 KRKSYLPAEKQYLITRNVPCLRRAAS 421
           KRKSYLP EKQYLITRNVPCLRRAAS
Sbjct: 61  KRKSYLPPEKQYLITRNVPCLRRAAS 86


>ref|XP_002326609.1| predicted protein [Populus trichocarpa] gi|222833931|gb|EEE72408.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  176 bits (447), Expect(2) = 1e-86
 Identities = 85/106 (80%), Positives = 95/106 (89%), Gaps = 1/106 (0%)
 Frame = -1

Query: 316 VLIDNEENDGWLATHGKPKETKCDEEENLPSMETLEISKSKT-IQSMPSYFGGEEEEDIP 140
           VL+DNE+NDGWLATHGKPKETK DE+EN+PSME LEIS  K+ IQ+  SYFGGEEEEDIP
Sbjct: 98  VLLDNEDNDGWLATHGKPKETKGDEDENVPSMEALEISAKKSLIQTNHSYFGGEEEEDIP 157

Query: 139 DMLGYEEPDNLIETDEATFQSTYLVAHEPDDDNILRTRTYDVSITY 2
           DM  +E+PDNLIE+D AT Q+TYLVAHEPDDDNILRTRTYDVSITY
Sbjct: 158 DMADFEDPDNLIESDPATLQTTYLVAHEPDDDNILRTRTYDVSITY 203



 Score =  170 bits (431), Expect(2) = 1e-86
 Identities = 81/86 (94%), Positives = 86/86 (100%)
 Frame = -2

Query: 678 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 499
           MVL+QKIHEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLVSKCPTWSWESGEPS
Sbjct: 1   MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS 60

Query: 498 KRKSYLPAEKQYLITRNVPCLRRAAS 421
           KRKSYLPAEKQ+LITRNVPCLRRAAS
Sbjct: 61  KRKSYLPAEKQFLITRNVPCLRRAAS 86


>ref|XP_002510982.1| conserved hypothetical protein [Ricinus communis]
           gi|223550097|gb|EEF51584.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score =  177 bits (449), Expect(2) = 4e-85
 Identities = 82/105 (78%), Positives = 94/105 (89%)
 Frame = -1

Query: 316 VLIDNEENDGWLATHGKPKETKCDEEENLPSMETLEISKSKTIQSMPSYFGGEEEEDIPD 137
           VL+DNE+NDGWLATHGKPKE+  DE+EN+PS+E LEISK   I S+PSYFGG+EEEDIPD
Sbjct: 98  VLLDNEDNDGWLATHGKPKESTGDEDENVPSLEALEISKKSPIHSIPSYFGGKEEEDIPD 157

Query: 136 MLGYEEPDNLIETDEATFQSTYLVAHEPDDDNILRTRTYDVSITY 2
           M  YE+P+NLIE+D AT QSTYL+AHEPDDDNILRTRTYDVSITY
Sbjct: 158 MDDYEDPNNLIESDPATLQSTYLIAHEPDDDNILRTRTYDVSITY 202



 Score =  164 bits (415), Expect(2) = 4e-85
 Identities = 77/86 (89%), Positives = 84/86 (97%)
 Frame = -2

Query: 678 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 499
           MVL+QK+HEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLV+KCPTWSWESGEPS
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWSWESGEPS 60

Query: 498 KRKSYLPAEKQYLITRNVPCLRRAAS 421
           KR SYLP EKQ+LITRNVPCLRRAAS
Sbjct: 61  KRMSYLPPEKQFLITRNVPCLRRAAS 86


>ref|XP_002303487.1| predicted protein [Populus trichocarpa] gi|222840919|gb|EEE78466.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  168 bits (426), Expect(2) = 7e-83
 Identities = 80/86 (93%), Positives = 85/86 (98%)
 Frame = -2

Query: 678 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 499
           MVL+QKIHEAFKGTVERITGPRTVSAFKEKGVLS++EFI+AGDNLVSKCPTWSWESGEPS
Sbjct: 1   MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS 60

Query: 498 KRKSYLPAEKQYLITRNVPCLRRAAS 421
           KRK YLPAEKQ+LITRNVPCLRRAAS
Sbjct: 61  KRKPYLPAEKQFLITRNVPCLRRAAS 86



 Score =  166 bits (419), Expect(2) = 7e-83
 Identities = 84/107 (78%), Positives = 94/107 (87%), Gaps = 2/107 (1%)
 Frame = -1

Query: 316 VLIDNEENDGWLATHGKPKETKCDEEENLPSMETLEIS-KSKTIQSMPSYFGGEEEEDIP 140
           VL+DNE+NDGWLATHGKPKETK DE+EN+PSME L+IS K   IQ+ PSYFGG EEEDIP
Sbjct: 98  VLLDNEDNDGWLATHGKPKETKGDEDENVPSMEALDISVKRIPIQTNPSYFGG-EEEDIP 156

Query: 139 DMLGYEEPDNLIETDEATFQSTYLVAHEP-DDDNILRTRTYDVSITY 2
           DM  +E+PDNLIE+D AT Q+TYLVAHEP DDDNILRTRTYDVSITY
Sbjct: 157 DMADFEDPDNLIESDPATLQTTYLVAHEPDDDDNILRTRTYDVSITY 203


>ref|XP_002866439.1| autophagy 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297312274|gb|EFH42698.1| autophagy 3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 313

 Score =  164 bits (415), Expect(2) = 6e-81
 Identities = 75/105 (71%), Positives = 94/105 (89%)
 Frame = -1

Query: 316 VLIDNEENDGWLATHGKPKETKCDEEENLPSMETLEISKSKTIQSMPSYFGGEEEEDIPD 137
           VL+D+E+NDGWLATHGKPK+ K +E+ENLPSM+ L+I++  TIQS+P+YFGGEE++DIPD
Sbjct: 98  VLVDDEDNDGWLATHGKPKD-KGNEDENLPSMDALDINEKNTIQSIPTYFGGEEDDDIPD 156

Query: 136 MLGYEEPDNLIETDEATFQSTYLVAHEPDDDNILRTRTYDVSITY 2
           M  ++E DN++E D AT QSTYLVAHEPDDDNILRTRTYD+SITY
Sbjct: 157 MEEFDEADNVVENDPATLQSTYLVAHEPDDDNILRTRTYDLSITY 201



 Score =  163 bits (413), Expect(2) = 6e-81
 Identities = 74/86 (86%), Positives = 85/86 (98%)
 Frame = -2

Query: 678 MVLTQKIHEAFKGTVERITGPRTVSAFKEKGVLSIAEFIIAGDNLVSKCPTWSWESGEPS 499
           MVL+QK+HEAFKGTVERITGPRT+SAFKEKGVLS++EF++AGDNLVSKCPTWSWESG+PS
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDPS 60

Query: 498 KRKSYLPAEKQYLITRNVPCLRRAAS 421
           KRK YLP++KQ+LITRNVPCLRRAAS
Sbjct: 61  KRKPYLPSDKQFLITRNVPCLRRAAS 86


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