BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007074
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]             89   4e-16
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              76   2e-12
emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]    73   3e-11
emb|CAN84035.1| hypothetical protein VITISV_016995 [Vitis vinifera]    72   4e-11
emb|CAN75232.1| hypothetical protein VITISV_016125 [Vitis vinifera]    72   4e-11

>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
          Length = 1902

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/107 (42%), Positives = 63/107 (58%)
 Frame = +1

Query: 1    LESNDQALAQAKALIDETRDVGLQQLIRYQADMKRKYDKKVRLKVFEKDDWVLCRKTRLI 180
            L S++ A+   K L++ETR   +  L +YQ + K+  DKKVR+K  +K D VL RK    
Sbjct: 1795 LASDEPAILTDKDLLEETRCSAVHNLRKYQEETKKWRDKKVRIKNLQKGDLVLIRKQNAS 1854

Query: 181  DSGKFGENWTGPYIIDRPATKGSYFLRDLDGNVLDKPWNAFHLRKFY 321
             +GKF   WTGP++I      GS+ L D +GN+L   WN   LRKFY
Sbjct: 1855 MAGKFQPKWTGPFLIAECNRPGSFHLSDSEGNILPHTWNIDDLRKFY 1901


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = +1

Query: 4    ESNDQALAQAKALIDETRDVGLQQLIRYQADMKRKYDKKVRLKVFEKDDWVLCR---KTR 174
            E N   L  +   I+E RD  L ++  YQ    R Y+ KV+ + F   D+VL R     +
Sbjct: 994  EENSAMLNDSLDTINERRDQALIRIQNYQQAAARYYNSKVKSRPFFVGDYVLRRVFDNKK 1053

Query: 175  LIDSGKFGENWTGPYIIDRPATKGSYFLRDLDGNVLDKPWNAFHLRKFY 321
               +GK G NW GPYII      G Y L+DL+ N + +PWN  +L+KFY
Sbjct: 1054 EEGAGKLGINWEGPYIITEVVRNGVYRLKDLEDNPVKRPWNVINLKKFY 1102


>emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]
          Length = 978

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
 Frame = +1

Query: 46   DETRDVGLQQLIRYQADMKRKYDKKVRLKVFEKDDWVLCR---KTRLIDSGKFGENWTGP 216
            DE R+  + ++  YQ      Y++KVR + F+    VL +    T  + +GKF  NW GP
Sbjct: 883  DEVRESAVIRMADYQQRASAHYNRKVRPRAFKNGTLVLRKVFENTTEVSAGKFQANWEGP 942

Query: 217  YIIDRPATKGSYFLRDLDGNVLDKPWNAFHLRKFYK 324
            YI+ + +  G+Y L+ LDG  L +PWN  +L+++Y+
Sbjct: 943  YIVSKASNNGAYHLQKLDGTPLLRPWNVSNLKQYYQ 978


>emb|CAN84035.1| hypothetical protein VITISV_016995 [Vitis vinifera]
          Length = 965

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
 Frame = +1

Query: 46   DETRDVGLQQLIRYQADMKRKYDKKVRLKVFEKDDWVLCR---KTRLIDSGKFGENWTGP 216
            DE R+    +++ YQ      Y++KVR + F+    VL +    T  I +GKF  NW GP
Sbjct: 870  DEVRESATIRMVDYQQRASTHYNRKVRPRNFKNGTLVLRKVFENTAEIGAGKFQANWEGP 929

Query: 217  YIIDRPATKGSYFLRDLDGNVLDKPWNAFHLRKFYK 324
            YI+ +    G+Y L+ LDG  L +PWNA +L+++Y+
Sbjct: 930  YIVSKANENGAYHLQKLDGTPLLRPWNASNLKQYYQ 965


>emb|CAN75232.1| hypothetical protein VITISV_016125 [Vitis vinifera]
          Length = 936

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = +1

Query: 46   DETRDVGLQQLIRYQADMKRKYDKKVRLKVFEKDDWVL---CRKTRLIDSGKFGENWTGP 216
            DE R+    Q+  YQ      Y+ KVR + F+    VL   C  T    +GKF  NW GP
Sbjct: 841  DEVRESAAIQMADYQQRASAHYNSKVRPRNFKNGMLVLRKVCENTTETGAGKFQANWKGP 900

Query: 217  YIIDRPATKGSYFLRDLDGNVLDKPWNAFHLRKFYK 324
            YI+ + +  G+Y L+ LDG  L +PWN  +L+++Y+
Sbjct: 901  YIVSKSSESGAYHLQKLDGTPLLRPWNVSNLKQYYQ 936