BLASTX nr result

ID: Coptis25_contig00007058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007058
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264425.1| PREDICTED: uncharacterized protein LOC100252...   121   4e-32
emb|CBI39348.3| unnamed protein product [Vitis vinifera]              121   4e-32
ref|XP_002521780.1| conserved hypothetical protein [Ricinus comm...   108   3e-28
ref|XP_002331460.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-27
ref|XP_002304060.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-27

>ref|XP_002264425.1| PREDICTED: uncharacterized protein LOC100252816 [Vitis vinifera]
          Length = 1172

 Score =  121 bits (303), Expect(2) = 4e-32
 Identities = 65/112 (58%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328  LSTSILVLRQILVSEKLATSAADVENAVLNYVGRLTELLDQVEDVGIAEIVETIS---ES 158
            ++TS+LVLRQ L+SE + T+AAD+EN V + + +L++LLD VEDVGI+EIV TIS   E 
Sbjct: 1009 IATSVLVLRQTLLSENMVTTAADMENIVSSCIKQLSKLLDTVEDVGISEIVGTISSFPEG 1068

Query: 157  SCDFVDAEKLQSRKEVMANMLGKSLRDGDPVFSSVSRAVYLAAMAVVFGGSG 2
            +   ++ EKLQ+RKEVMANMLGKSL+ GD +F+ VS  VYLAA  +V GG+G
Sbjct: 1069 NNHTLNPEKLQARKEVMANMLGKSLQAGDAIFTRVSHTVYLAARGIVLGGNG 1120



 Score = 44.7 bits (104), Expect(2) = 4e-32
 Identities = 25/42 (59%), Positives = 29/42 (69%)
 Frame = -2

Query: 449  RFGFGSTPNWIH*ITQETVPKTLKLNLSRLRDVQAQLQKIIV 324
            R G     N I  +  ET+P+TLKLNLSRLR VQ+Q QKIIV
Sbjct: 967  RVGLLKLVNEIGGLMLETLPETLKLNLSRLRGVQSQFQKIIV 1008


>emb|CBI39348.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  121 bits (303), Expect(2) = 4e-32
 Identities = 65/112 (58%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328  LSTSILVLRQILVSEKLATSAADVENAVLNYVGRLTELLDQVEDVGIAEIVETIS---ES 158
            ++TS+LVLRQ L+SE + T+AAD+EN V + + +L++LLD VEDVGI+EIV TIS   E 
Sbjct: 951  IATSVLVLRQTLLSENMVTTAADMENIVSSCIKQLSKLLDTVEDVGISEIVGTISSFPEG 1010

Query: 157  SCDFVDAEKLQSRKEVMANMLGKSLRDGDPVFSSVSRAVYLAAMAVVFGGSG 2
            +   ++ EKLQ+RKEVMANMLGKSL+ GD +F+ VS  VYLAA  +V GG+G
Sbjct: 1011 NNHTLNPEKLQARKEVMANMLGKSLQAGDAIFTRVSHTVYLAARGIVLGGNG 1062



 Score = 44.7 bits (104), Expect(2) = 4e-32
 Identities = 25/42 (59%), Positives = 29/42 (69%)
 Frame = -2

Query: 449  RFGFGSTPNWIH*ITQETVPKTLKLNLSRLRDVQAQLQKIIV 324
            R G     N I  +  ET+P+TLKLNLSRLR VQ+Q QKIIV
Sbjct: 909  RVGLLKLVNEIGGLMLETLPETLKLNLSRLRGVQSQFQKIIV 950


>ref|XP_002521780.1| conserved hypothetical protein [Ricinus communis]
            gi|223538993|gb|EEF40590.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 980

 Score =  108 bits (269), Expect(2) = 3e-28
 Identities = 58/112 (51%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328  LSTSILVLRQILVSEKLATSAADVENAVLNYVGRLTELLDQVEDVGIAEIVETISES--- 158
            +STS+L+LRQ++V+EKL +++ D+EN V   + +L+ELLD+VE+VG++EI  TIS +   
Sbjct: 817  VSTSMLILRQMIVTEKLLSNSLDMENIVSESIEQLSELLDRVENVGLSEIAATISGTLNI 876

Query: 157  SCDFVDAEKLQSRKEVMANMLGKSLRDGDPVFSSVSRAVYLAAMAVVFGGSG 2
            S   +DAEKLQ+R+++M +MLGKSL+  D VF +VSR VY A    V GGSG
Sbjct: 877  SGHVIDAEKLQARQKIMQSMLGKSLQTEDAVFVNVSRCVYRALRGAVLGGSG 928



 Score = 44.7 bits (104), Expect(2) = 3e-28
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -2

Query: 410 ITQETVPKTLKLNLSRLRDVQAQLQKIIV 324
           +T ET+P+TLKLNLSRLR VQ+Q QKIIV
Sbjct: 788 LTLETLPETLKLNLSRLRVVQSQFQKIIV 816


>ref|XP_002331460.1| predicted protein [Populus trichocarpa] gi|222873538|gb|EEF10669.1|
            predicted protein [Populus trichocarpa]
          Length = 1178

 Score =  107 bits (268), Expect(2) = 1e-27
 Identities = 61/109 (55%), Positives = 78/109 (71%)
 Frame = -3

Query: 328  LSTSILVLRQILVSEKLATSAADVENAVLNYVGRLTELLDQVEDVGIAEIVETISESSCD 149
            +STSILV +Q L++E+   S AD+E+ +L    +L+E+LD+V+DVGI EIVE +S  S D
Sbjct: 1020 ISTSILVYQQTLLTERAVNSNADMESILLERGNKLSEVLDRVDDVGIEEIVEVVSGFSQD 1079

Query: 148  FVDAEKLQSRKEVMANMLGKSLRDGDPVFSSVSRAVYLAAMAVVFGGSG 2
              D EK + RK VMA ML KSL+ GDPVF  VSRAVYLA   +V GGSG
Sbjct: 1080 --DEEKHKPRKLVMARMLAKSLQAGDPVFEIVSRAVYLALRGIVLGGSG 1126



 Score = 43.1 bits (100), Expect(2) = 1e-27
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = -2

Query: 449  RFGFGSTPNWIH*ITQETVPKTLKLNLSRLRDVQAQLQKIIV 324
            R G     + +  +T+ET+P+T  LNLSRLR VQA++QK+IV
Sbjct: 978  RLGLLKIVSGVSGLTKETLPETFMLNLSRLRSVQAEIQKMIV 1019


>ref|XP_002304060.1| predicted protein [Populus trichocarpa] gi|222841492|gb|EEE79039.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  110 bits (274), Expect(2) = 1e-27
 Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328 LSTSILVLRQILVSEKLATSAADVENAVLNYVGRLTELLDQVEDVGIAEIVETIS---ES 158
           +STSILV RQ L+ E+  TS+AD+EN +L    +L+E+LD+V+D GI EIVE +S   + 
Sbjct: 295 ISTSILVCRQTLLMEQAVTSSADMENILLECSNKLSEVLDRVDDAGIEEIVEVVSGLLQG 354

Query: 157 SCDFVDAEKLQSRKEVMANMLGKSLRDGDPVFSSVSRAVYLAAMAVVFGGSG 2
               VD EKL+ RK VMA ML KSL+ GD +F  VSRAVYLA   +V GGSG
Sbjct: 355 DDKVVDEEKLKPRKIVMARMLAKSLQAGDLIFEKVSRAVYLALRGIVLGGSG 406



 Score = 40.4 bits (93), Expect(2) = 1e-27
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = -2

Query: 449 RFGFGSTPNWIH*ITQETVPKTLKLNLSRLRDVQAQLQKIIV 324
           R G     + +  +T+E +P+T  LNL RLR VQAQ+QKIIV
Sbjct: 253 RLGLLKLVSGVSGLTKEALPETFMLNLLRLRAVQAQIQKIIV 294


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