BLASTX nr result

ID: Coptis25_contig00007054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007054
         (1445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [V...   183   1e-43
ref|XP_002282409.1| PREDICTED: transcription factor TCP9-like [V...   179   2e-42
emb|CBI38834.3| unnamed protein product [Vitis vinifera]              176   2e-41
gb|ADL36831.1| TCP domain class transcription factor [Malus x do...   169   2e-39
ref|XP_003525544.1| PREDICTED: transcription factor TCP9-like [G...   169   2e-39

>ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
          Length = 360

 Score =  183 bits (464), Expect = 1e-43
 Identities = 130/322 (40%), Positives = 170/322 (52%), Gaps = 6/322 (1%)
 Frame = +3

Query: 249  IGAVPISAMQMPMPMSKQVQVRKTAVSPTTAAAKRASRDRHAKVEGRGXXXXXXXXXXXX 428
            +G VP++   MPMP    VQVR+    P     + +++DRH KVEGRG            
Sbjct: 81   MGVVPVA---MPMP----VQVRR----PAPPVKRASTKDRHTKVEGRGRRIRMPATCAAR 129

Query: 429  XFQLTRELGHKSDGETVRWLLENAETSIIAATGTGTVPASSLSVQGSLNXXXXXXXXXXH 608
             FQLTRELGHKSDGET+RWLLE+AE +IIAATGTGTVPA ++SV G+L            
Sbjct: 130  IFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLK----------- 178

Query: 609  IPENETASXXXXXXXXXXXXRKQSDEVSNENNQKKVVVDYSHSMSGGLAPIATGGISPQG 788
            IP   TA+            R  + E  + N+        + S+S GLAPIAT  ++PQG
Sbjct: 179  IPTTSTATTQEPDPNKKKRKRPANSEFVDVND--------AVSVSSGLAPIAT-PLAPQG 229

Query: 789  FVPMWGVTSDGRLIPSVPTGAFWMIPQTSTTSIAAAAGPSSNQPQLWAFPPTMSMTPVMS 968
             VPMW        IPS   GAFWM+P T+     A AGP SNQPQ+W FPPT   TP+++
Sbjct: 230  LVPMWA-------IPSNAVGAFWMVPPTT-----AIAGP-SNQPQIWTFPPT--ATPLIN 274

Query: 969  FSAIQPAGVTIATSIDVQPPTQIHSVANSVTNSVGV------AXXXXXXXXXXXXXXXXX 1130
             SA +P    +++   + P   + S   S  ++VGV      +                 
Sbjct: 275  ISA-RPISSFVSS---MHPTINVASATASAASTVGVKASKASSTMAPSSTSTATTTTTTT 330

Query: 1131 XXXXXQLLRDFSLQICDKQELR 1196
                 Q+LRDFSL+I DKQEL+
Sbjct: 331  STTTTQMLRDFSLEIYDKQELQ 352


>ref|XP_002282409.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
          Length = 387

 Score =  179 bits (453), Expect = 2e-42
 Identities = 125/332 (37%), Positives = 167/332 (50%), Gaps = 16/332 (4%)
 Frame = +3

Query: 249  IGAVPISAMQMPMPMSKQVQVRKTAVSPTTAAAKRASRDRHAKVEGRGXXXXXXXXXXXX 428
            IG VP+  MQMPMP+   +        P ++  + +++DRH KVEGRG            
Sbjct: 75   IGVVPVIQMQMPMPIPMPM--------PVSSGRRSSTKDRHTKVEGRGRRIRIPATCAAR 126

Query: 429  XFQLTRELGHKSDGETVRWLLENAETSIIAATGTGTVPASSLSVQGSLNXXXXXXXXXXH 608
             FQLTRELGHKSDGETVRWLLE+AE +II ATGTGTVPA ++SV G+L            
Sbjct: 127  IFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLK----------- 175

Query: 609  IPENETASXXXXXXXXXXXXRKQSDEVSNENNQKKVVVDYSHSMSGGLAPI---ATGGIS 779
            IP + +++             +   +     N +   V+   S+S GLAP+   A    +
Sbjct: 176  IPTSSSSNPEG----------EAPKKRKRPANSEFYDVNDGVSVSSGLAPVGATAVAAAA 225

Query: 780  PQGFVPMWGVTSDGRLIP--SVPTGAFWMIPQTSTTSIAAAAGPSSNQPQLWAFPPT--- 944
            PQG VP+W V + G +IP  +V  G FWMIP T+T      AGP  NQPQLW   P+   
Sbjct: 226  PQGLVPIWAVGNAGMMIPPNAVAAGTFWMIPPTAT----PVAGP-PNQPQLWTISPSVSP 280

Query: 945  ---MSMTPVMSFSAIQPAGVTIATSIDVQ-PPTQIHSVANSVTNSVGVA----XXXXXXX 1100
               MS  P+ SF +    G+    ++DV+ PP   +S   S T S   A           
Sbjct: 281  VFNMSARPISSFVSATQPGMNHPPALDVRAPPVLCNSATISATTSTAGARAAKKSTMAPC 340

Query: 1101 XXXXXXXXXXXXXXXQLLRDFSLQICDKQELR 1196
                           Q+LRDFSL+I DK+EL+
Sbjct: 341  VSSTTTTTNTSATKPQMLRDFSLEIYDKKELQ 372


>emb|CBI38834.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  176 bits (445), Expect = 2e-41
 Identities = 126/316 (39%), Positives = 165/316 (52%)
 Frame = +3

Query: 249  IGAVPISAMQMPMPMSKQVQVRKTAVSPTTAAAKRASRDRHAKVEGRGXXXXXXXXXXXX 428
            +G VP++   MPMP    VQVR+    P     + +++DRH KVEGRG            
Sbjct: 94   MGVVPVA---MPMP----VQVRR----PAPPVKRASTKDRHTKVEGRGRRIRMPATCAAR 142

Query: 429  XFQLTRELGHKSDGETVRWLLENAETSIIAATGTGTVPASSLSVQGSLNXXXXXXXXXXH 608
             FQLTRELGHKSDGET+RWLLE+AE +IIAATGTGTVPA ++SV G+L            
Sbjct: 143  IFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLK----------- 191

Query: 609  IPENETASXXXXXXXXXXXXRKQSDEVSNENNQKKVVVDYSHSMSGGLAPIATGGISPQG 788
            IP   TA+            R  + E  + N+        + S+S GLAPIAT  ++PQG
Sbjct: 192  IPTTSTATTQEPDPNKKKRKRPANSEFVDVND--------AVSVSSGLAPIAT-PLAPQG 242

Query: 789  FVPMWGVTSDGRLIPSVPTGAFWMIPQTSTTSIAAAAGPSSNQPQLWAFPPTMSMTPVMS 968
             VPMW        IPS   GAFWM+P T+     A AGP SNQPQ+W FPPT   TP+++
Sbjct: 243  LVPMWA-------IPSNAVGAFWMVPPTT-----AIAGP-SNQPQIWTFPPT--ATPLIN 287

Query: 969  FSAIQPAGVTIATSIDVQPPTQIHSVANSVTNSVGVAXXXXXXXXXXXXXXXXXXXXXXQ 1148
             SA +P    +++   + P   + S   S  ++                           
Sbjct: 288  ISA-RPISSFVSS---MHPTINVASATASAAST--------------------------- 316

Query: 1149 LLRDFSLQICDKQELR 1196
            +LRDFSL+I DKQEL+
Sbjct: 317  MLRDFSLEIYDKQELQ 332


>gb|ADL36831.1| TCP domain class transcription factor [Malus x domestica]
          Length = 343

 Score =  169 bits (428), Expect = 2e-39
 Identities = 126/335 (37%), Positives = 164/335 (48%), Gaps = 19/335 (5%)
 Frame = +3

Query: 249  IGAVPISAMQMPMPMSKQVQVRKTAVSPTTAAAKRAS-RDRHAKVEGRGXXXXXXXXXXX 425
            IG +P   MQMP+PMS Q+        P +A  +R+S +DRH KVEGRG           
Sbjct: 32   IGMLP-DTMQMPVPMSVQL--------PVSAPTRRSSTKDRHTKVEGRGRRIRIPATCAA 82

Query: 426  XXFQLTRELGHKSDGETVRWLLENAETSIIAATGTGTVPASSLSVQGSLNXXXXXXXXXX 605
              FQLTRELGHKSDGETVRWLLE+AE +II ATGTGTVPA ++SV G+L           
Sbjct: 83   RIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLK---------- 132

Query: 606  HIPENETASXXXXXXXXXXXXRKQSDEVSNENNQKKVVVDYSHSMSGGLAPIATGGISPQ 785
             IP   + S            +++    S   + +K  V    S S GLAP+  G  +PQ
Sbjct: 133  -IPTTSSTSVEDNSSPTSATKKRKRPSNSEFVDVRKDAV----SQSSGLAPV--GPAAPQ 185

Query: 786  GFVPMWGVTSDGRLIPSVPTGAFWMIPQTSTTSIAAAAGPSSNQPQLWAFPPTMSMT--- 956
            G VP+W V   G +   VP  AFWM P      + + AG    QPQ+WA  PTM+     
Sbjct: 186  GLVPVWAVGGAGLI---VPANAFWMGP------VGSGAGSPGPQPQIWALSPTMTPVFNM 236

Query: 957  -----PVMSFSAIQPAGVTIATSIDVQPPTQIHSVANSVTNSVG----------VAXXXX 1091
                 P+ SF      G   A  +DV+ P+   S + + T++VG          +A    
Sbjct: 237  AGAAGPISSFVVNSGGG---AGGVDVRAPSPALSNSAASTSTVGARAAKRSSTTMAPPSV 293

Query: 1092 XXXXXXXXXXXXXXXXXXQLLRDFSLQICDKQELR 1196
                              Q+LRDFSL+I DKQEL+
Sbjct: 294  SFSSNNSNSSGSGATTKTQMLRDFSLEIYDKQELK 328


>ref|XP_003525544.1| PREDICTED: transcription factor TCP9-like [Glycine max]
          Length = 346

 Score =  169 bits (427), Expect = 2e-39
 Identities = 114/299 (38%), Positives = 153/299 (51%), Gaps = 6/299 (2%)
 Frame = +3

Query: 318  TAVSPTTAAAKRASRDRHAKVEGRGXXXXXXXXXXXXXFQLTRELGHKSDGETVRWLLEN 497
            T + P     + +++DRH KVEGRG             FQLTRELGHKSDGETVRWLLE+
Sbjct: 62   TEIVPVKLPKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEH 121

Query: 498  AETSIIAATGTGTVPASSLSVQGSLNXXXXXXXXXXHIPENETASXXXXXXXXXXXXRKQ 677
            AE +II ATGTGTVPA ++SV G+L            IP   + S            +K+
Sbjct: 122  AEPAIIEATGTGTVPAIAVSVGGALK-----------IPTTSSNSNEEAAAAAASSNKKR 170

Query: 678  SDEVSNENNQKKVVVDYSHSMSGGLAPIATGGISPQGFVPMWGVTSDGRLIPSVPTGAFW 857
                ++E     + ++ + S S GLAP+      PQG VP+W V++   +IP+     FW
Sbjct: 171  KRPSNSEFVDINININDAVSKSSGLAPVHV----PQGLVPVWAVSNPSMVIPA---NTFW 223

Query: 858  MIPQTSTT--SIAAAAGPSSNQPQLWAFPPTMSMTPVMSFSAIQPAGVTIATSIDVQPP- 1028
            MIPQ +TT       AGP+S QPQLWA  P++         A +P    + T+I    P 
Sbjct: 224  MIPQAATTPNPSGGVAGPASQQPQLWALSPSVFNV------AARPISPLVTTNIPEARPV 277

Query: 1029 -TQIHSVANSV--TNSVGVAXXXXXXXXXXXXXXXXXXXXXXQLLRDFSLQICDKQELR 1196
             T   + +NS   T++VG A                      Q+LRDFSL+ICDKQEL+
Sbjct: 278  MTACSNGSNSAVSTSTVG-AKLATKSSMAPSVSSSGTKSGKTQMLRDFSLEICDKQELQ 335


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