BLASTX nr result

ID: Coptis25_contig00007048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007048
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          137   2e-30
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]   136   5e-30
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   135   1e-29
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   134   1e-29
emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]   134   2e-29

>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  137 bits (346), Expect = 2e-30
 Identities = 64/127 (50%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
 Frame = +3

Query: 315 VSEMHVG-MITELNMAAATKSFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNS 491
           VS++++  ++ E+NM  +    +WW+D+GAT HVC+DK  + ++EAA++ +++ MGN  +
Sbjct: 303 VSDINLSAVVLEVNMVGSNPR-EWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSAT 361

Query: 492 AKVLGKGSVELQFTSGKKLTLMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNG 671
           +++ G+G V L+ TSGK+LTL NVL+VPE+RKNLVS +LL K+GF++V ESD ++LSKNG
Sbjct: 362 SEIEGQGKVALKMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNG 421

Query: 672 VFVGKGY 692
           ++VGKGY
Sbjct: 422 MYVGKGY 428


>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score =  136 bits (342), Expect = 5e-30
 Identities = 92/241 (38%), Positives = 124/241 (51%), Gaps = 10/241 (4%)
 Frame = +3

Query: 3   LEEIQKYLRIEEETHLRDNKFLPND--SSKVNNVERXXXXXXXXXXXXXXXXXXXXXXXX 176
           LEEIQK+LRIEEE+  RD     ++  ++K N + +                        
Sbjct: 189 LEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPKKN 248

Query: 177 XXXXXXXXXXXX--------ARDCRYXXXXXXXXXXXXXXXXMVEEKATELVAMVSEMHV 332
                               AR+CR+                +V     E++A +S++ V
Sbjct: 249 QEQFKGKKGXCFVCGKPGHYARECRFRKDQKGA---------VVNAIDEEIIATLSDVCV 299

Query: 333 GMITELNMAAATKSFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKG 512
                       K   WW D+ AT+HV  DK+ +KT+E A   QEV MGN   +KVLGKG
Sbjct: 300 ---------VQGKVQGWWYDTCATVHVTYDKSLFKTFEDAKGBQEVQMGNEGKSKVLGKG 350

Query: 513 SVELQFTSGKKLTLMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGY 692
           ++E+ FTSGKK+TL NVL+VP++ KNLVS +LL K G K V ES K+ILSK+G FVGKGY
Sbjct: 351 TIEVVFTSGKKVTLTNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILSKSGNFVGKGY 410

Query: 693 S 695
           S
Sbjct: 411 S 411


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  135 bits (339), Expect = 1e-29
 Identities = 90/241 (37%), Positives = 123/241 (51%), Gaps = 10/241 (4%)
 Frame = +3

Query: 3   LEEIQKYLRIEEETHLRDNKFLPND--SSKVNNVERXXXXXXXXXXXXXXXXXXXXXXXX 176
           LEEIQK+LRIEEE+  RD     ++  ++K N + +                        
Sbjct: 189 LEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANHPRGKNNNNKKNSGNYMSPKKN 248

Query: 177 XXXXXXXXXXXX--------ARDCRYXXXXXXXXXXXXXXXXMVEEKATELVAMVSEMHV 332
                               AR+CR+                +V     E++A +S++ V
Sbjct: 249 QEQFKGKKGPCFVCGKPGHYARECRFRKDQKGA---------VVNAIDEEIIATLSDVCV 299

Query: 333 GMITELNMAAATKSFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKG 512
                       K   WW D+ AT+HV  DK+ +KT+E A   QEV MGN   +KVLGKG
Sbjct: 300 ---------VQGKVQGWWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKG 350

Query: 513 SVELQFTSGKKLTLMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGY 692
           ++E+ FTSGKK+TL NVL+VP++ KNLVS +LL K G K V ES K+IL+K+G FVGKGY
Sbjct: 351 TIEVVFTSGKKVTLKNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKGY 410

Query: 693 S 695
           S
Sbjct: 411 S 411


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  134 bits (338), Expect = 1e-29
 Identities = 60/119 (50%), Positives = 93/119 (78%)
 Frame = +3

Query: 336 MITELNMAAATKSFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKGS 515
           +++E+N+  +    +WW+D+GAT HVC+DK  + T+E   +G++V MGN  ++++ G+G 
Sbjct: 322 VVSEVNLVGSNPK-EWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGK 380

Query: 516 VELQFTSGKKLTLMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGY 692
           V L+ TSGK+LTL NVL+VPE+RKNLVS +LL  +GF++V ES+K +LSK+G++VGKGY
Sbjct: 381 VILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKGY 439


>emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]
          Length = 474

 Score =  134 bits (337), Expect = 2e-29
 Identities = 66/137 (48%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = +3

Query: 285 EEKATELVAMVSEMHVG-MITELNMAAATKSFDWWLDSGATIHVCNDKA*YKTYEAATDG 461
           E+K    +   + M++  +++E N+   TK  +WW+D+GAT H+C++K  + TY+     
Sbjct: 206 EKKGNNSMEAKANMNLSAVVSECNIVGNTK--EWWVDTGATRHICSNKWMFSTYKPVEQN 263

Query: 462 QEVLMGNHNSAKVLGKGSVELQFTSGKKLTLMNVLHVPEVRKNLVSANLLCKNGFKVVLE 641
           +E+ MG  +S+KV G+G V L+ TSGK+LTL +VLHVP++RKNLVS +LL KNGFK+V  
Sbjct: 264 EELFMGYSSSSKVEGRGKVILKMTSGKELTLNDVLHVPDIRKNLVSRSLLSKNGFKLVFV 323

Query: 642 SDKIILSKNGVFVGKGY 692
           SDK +L+KN +FVGKGY
Sbjct: 324 SDKFVLTKNEMFVGKGY 340


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