BLASTX nr result

ID: Coptis25_contig00007044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007044
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542944.1| PREDICTED: ABC transporter C family member 2...   184   5e-45
ref|XP_003593890.1| ABC transporter C family member [Medicago tr...   181   5e-44
ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2...   179   2e-43
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   176   2e-42
ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2...   171   6e-41

>ref|XP_003542944.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]
          Length = 1620

 Score =  184 bits (468), Expect = 5e-45
 Identities = 81/114 (71%), Positives = 98/114 (85%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTQVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F+PL+WYC+PV NG WT+ V+NAFGAYTPC VD+LVI +S+L+LLGLC YRIW IKKDF 
Sbjct: 3   FEPLDWYCRPVANGVWTRSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIWLIKKDFT 62

Query: 258 VKRFHLKSNIYNYVLGLLAFYSTVEPLFRLVMKYSILNLDGQTTLAPFEIVSLL 419
           VKRFHL+SN+YNY+LGLLA Y   EPL+RL++  S+LNLDGQT  APFEIVSL+
Sbjct: 63  VKRFHLRSNLYNYILGLLALYCVAEPLYRLILGISVLNLDGQTQFAPFEIVSLI 116


>ref|XP_003593890.1| ABC transporter C family member [Medicago truncatula]
           gi|355482938|gb|AES64141.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1712

 Score =  181 bits (459), Expect = 5e-44
 Identities = 82/114 (71%), Positives = 96/114 (84%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTQVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F PL WYC+PVENG WT+ V+NAFGAYTPC VD+LVI ISHLV+LGLC YRIW I+KDF 
Sbjct: 3   FDPLVWYCQPVENGVWTRTVQNAFGAYTPCAVDSLVIGISHLVILGLCIYRIWLIQKDFS 62

Query: 258 VKRFHLKSNIYNYVLGLLAFYSTVEPLFRLVMKYSILNLDGQTTLAPFEIVSLL 419
           VKRF L+SN+YNYVLG+LA Y   EPL+RL+M  S+LNLDGQ+ LAPFEI SL+
Sbjct: 63  VKRFRLRSNVYNYVLGVLAAYCVAEPLYRLIMGVSVLNLDGQSQLAPFEITSLI 116


>ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]
          Length = 1620

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/114 (70%), Positives = 96/114 (84%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTQVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F+PL WYC+PV NG WT+ V+NAFGAYTPC VD+LVI +S+L+LLGLC YRIW I KDF 
Sbjct: 3   FEPLNWYCRPVANGVWTKSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIWLIMKDFT 62

Query: 258 VKRFHLKSNIYNYVLGLLAFYSTVEPLFRLVMKYSILNLDGQTTLAPFEIVSLL 419
           VKRF L+SN+YNY+LGLLA Y   EPL+RL+M  S+LNLDGQT LAPFEI+SL+
Sbjct: 63  VKRFCLRSNLYNYILGLLALYCVAEPLYRLIMGISVLNLDGQTQLAPFEIISLI 116


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
           vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
           product [Vitis vinifera]
          Length = 1623

 Score =  176 bits (445), Expect = 2e-42
 Identities = 80/114 (70%), Positives = 91/114 (79%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTQVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F PL WYC+PV NG W ++V NAFG YTPC  DTLVI ISH +LL LCFYRIWRIKKDFK
Sbjct: 3   FGPLVWYCRPVTNGVWAKLVDNAFGVYTPCATDTLVISISHFILLSLCFYRIWRIKKDFK 62

Query: 258 VKRFHLKSNIYNYVLGLLAFYSTVEPLFRLVMKYSILNLDGQTTLAPFEIVSLL 419
           V+RF L+SN YNY+L LLA Y T EPLFRL+M  S+ NLDGQ  LAPFE+VSL+
Sbjct: 63  VQRFCLRSNYYNYMLALLAGYCTAEPLFRLIMGISVFNLDGQAGLAPFEVVSLI 116


>ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2-like [Vitis vinifera]
          Length = 1624

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/114 (69%), Positives = 93/114 (81%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTQVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F+PL WYC+PV NG W +  ++AFG YTPC VD++V+CISHLVLLGLC YRIW IK DFK
Sbjct: 3   FEPLVWYCQPVANGVWAKAAESAFGPYTPCAVDSIVVCISHLVLLGLCCYRIWLIKMDFK 62

Query: 258 VKRFHLKSNIYNYVLGLLAFYSTVEPLFRLVMKYSILNLDGQTTLAPFEIVSLL 419
           V+RF L+SN YNY+LGLLA Y T EPLFRLVM  SI +LD QT LAP+EIVSL+
Sbjct: 63  VQRFCLQSNYYNYMLGLLACYCTAEPLFRLVMGVSIFDLDEQTGLAPYEIVSLI 116


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