BLASTX nr result

ID: Coptis25_contig00007043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007043
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593890.1| ABC transporter C family member [Medicago tr...   139   2e-31
ref|XP_003542944.1| PREDICTED: ABC transporter C family member 2...   137   7e-31
ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2...   134   6e-30
emb|CAN69720.1| hypothetical protein VITISV_018041 [Vitis vinifera]   133   2e-29
ref|XP_003580573.1| PREDICTED: ABC transporter C family member 2...   132   2e-29

>ref|XP_003593890.1| ABC transporter C family member [Medicago truncatula]
           gi|355482938|gb|AES64141.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1712

 Score =  139 bits (351), Expect = 2e-31
 Identities = 61/81 (75%), Positives = 70/81 (86%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTKVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F PL WYC+PVENG WT+ V+NAFGAYTPC VD+LVI ISHLV+LGLC YRIW I+KDF 
Sbjct: 3   FDPLVWYCQPVENGVWTRTVQNAFGAYTPCAVDSLVIGISHLVILGLCIYRIWLIQKDFS 62

Query: 258 VKRFRLKSNIYNYVLGLFAFY 320
           VKRFRL+SN+YNYVLG+ A Y
Sbjct: 63  VKRFRLRSNVYNYVLGVLAAY 83


>ref|XP_003542944.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]
          Length = 1620

 Score =  137 bits (346), Expect = 7e-31
 Identities = 58/81 (71%), Positives = 70/81 (86%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTKVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F+PL+WYC+PV NG WT+ V+NAFGAYTPC VD+LVI +S+L+LLGLC YRIW IKKDF 
Sbjct: 3   FEPLDWYCRPVANGVWTRSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIWLIKKDFT 62

Query: 258 VKRFRLKSNIYNYVLGLFAFY 320
           VKRF L+SN+YNY+LGL A Y
Sbjct: 63  VKRFHLRSNLYNYILGLLALY 83


>ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]
          Length = 1620

 Score =  134 bits (338), Expect = 6e-30
 Identities = 58/81 (71%), Positives = 68/81 (83%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTKVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F+PL WYC+PV NG WTK V+NAFGAYTPC VD+LVI +S+L+LLGLC YRIW I KDF 
Sbjct: 3   FEPLNWYCRPVANGVWTKSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIWLIMKDFT 62

Query: 258 VKRFRLKSNIYNYVLGLFAFY 320
           VKRF L+SN+YNY+LGL A Y
Sbjct: 63  VKRFCLRSNLYNYILGLLALY 83


>emb|CAN69720.1| hypothetical protein VITISV_018041 [Vitis vinifera]
          Length = 355

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/81 (72%), Positives = 65/81 (80%)
 Frame = +3

Query: 78  FKPLEWYCKPVENGAWTKVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDFK 257
           F PL WYC+PV NG W K+V NAFG YTPC  DTLVI ISHL+LL LCFYRIWRIKKDFK
Sbjct: 3   FGPLVWYCRPVTNGVWAKLVDNAFGVYTPCATDTLVISISHLILLSLCFYRIWRIKKDFK 62

Query: 258 VKRFRLKSNIYNYVLGLFAFY 320
           V+RF L+SN YNY+L L A Y
Sbjct: 63  VQRFCLRSNYYNYMLALLAGY 83


>ref|XP_003580573.1| PREDICTED: ABC transporter C family member 2-like [Brachypodium
           distachyon]
          Length = 1629

 Score =  132 bits (333), Expect = 2e-29
 Identities = 53/82 (64%), Positives = 69/82 (84%)
 Frame = +3

Query: 75  GFKPLEWYCKPVENGAWTKVVKNAFGAYTPCGVDTLVICISHLVLLGLCFYRIWRIKKDF 254
           GFKPLEWYC+PV +GAW++ V++AFGAYTPCG+DTLV+CIS+L L G+CFYRIWR  KD+
Sbjct: 2   GFKPLEWYCQPVSHGAWSRAVESAFGAYTPCGIDTLVVCISYLALFGVCFYRIWRTTKDY 61

Query: 255 KVKRFRLKSNIYNYVLGLFAFY 320
            V+R++L+S  YNY+LG    Y
Sbjct: 62  TVQRYKLRSPYYNYLLGFLVVY 83


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