BLASTX nr result

ID: Coptis25_contig00007037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007037
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276957.1| PREDICTED: uncharacterized protein LOC100244...   110   4e-23
ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255...    98   5e-19
emb|CBI34299.3| unnamed protein product [Vitis vinifera]               98   5e-19
ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_004163100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    98   4e-18

>ref|XP_002276957.1| PREDICTED: uncharacterized protein LOC100244334 [Vitis vinifera]
          Length = 1044

 Score =  110 bits (276), Expect(2) = 4e-23
 Identities = 57/122 (46%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTFPDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFRL 978
            IWA+    D +PK Y QI  I + PDFKL +TWLE    P  + QW +K+M   CG F++
Sbjct: 840  IWALYSDEDGLPKYYCQIKKIDSDPDFKLHVTWLEACSPPNDMIQWLDKKMLTTCGRFKI 899

Query: 979  GKTVVLTQLSDSRMFSHKSEAKVCG-IHKYEIIPRKGELWALYKNFDSEMTCSELVKYEY 1155
             K    T  S +  FSH+  A++    ++Y I PRKGE+WALYKN+++EMTCS+L   EY
Sbjct: 900  KKGKPQTYTS-AASFSHQLRAELTDKKNEYAIFPRKGEVWALYKNWNAEMTCSDLENCEY 958

Query: 1156 DI 1161
            DI
Sbjct: 959  DI 960



 Score = 24.6 bits (52), Expect(2) = 4e-23
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 746 DFEADRKPWKFQHHQIW 796
           +F+A++ P KFQ  QIW
Sbjct: 825 NFDAEKSPEKFQVGQIW 841



 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
 Frame = +1

Query: 802  WAVNCRFDAMPKNYAQINWIKTFPDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFRLG 981
            WAV    DAMP+ YAQI  + +   FKL ITWLEPD + +   +W  +++P +CG F+ G
Sbjct: 535  WAVYDTVDAMPRFYAQIRKVFS-TGFKLRITWLEPDPSDEAEIEWVSEDLPYSCGNFKRG 593

Query: 982  KTVVLTQLSDSRMFSH-KSEAKVCGIHKYEIIPRKGELWALYKNFDSEMTCSELVKYEYD 1158
            K+       D  MFSH  S  K      Y+I PRKGE WAL+KN+D + +       +Y+
Sbjct: 594  KS---ENTGDRLMFSHLVSWEKDRSRDAYKIHPRKGETWALFKNWDIKWSSDPESHRKYE 650

Query: 1159 IEF 1167
             E+
Sbjct: 651  FEY 653


>ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255461 [Vitis vinifera]
          Length = 1169

 Score = 98.2 bits (243), Expect(2) = 5e-19
 Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTFPDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFRL 978
            +WA+    D MPKNYAQ+  I+  P F+L + +LE    PK + Q      PV CG F+L
Sbjct: 972  LWALYSEVDRMPKNYAQVKKIEPTPSFRLHVVFLEACSPPKDMVQ------PVCCGTFKL 1025

Query: 979  --GKTVVLTQLSDSRMFSHKSEAKVCGIHKYEIIPRKGELWALYKNFDSEMTCSELVKYE 1152
              GKT V  +      FSH+  A+  G +K+ I+P KG++WALYKN+++ + CS++V  +
Sbjct: 1026 KNGKTKVFPRAD----FSHQIRAESIGKNKFAILPIKGQVWALYKNWENNLMCSDIVNCK 1081

Query: 1153 YDI 1161
            YDI
Sbjct: 1082 YDI 1084



 Score = 23.5 bits (49), Expect(2) = 5e-19
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 743  YDFEADRKPWKFQHHQIW 796
            YDF  ++   KFQ  Q+W
Sbjct: 956  YDFSGEKSEEKFQTGQLW 973



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTF-PDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFR 975
            IWA+    D MP+ YA+I   K F P+FKL  TWLEP         W + E+P ACG F 
Sbjct: 539  IWAIYDPIDGMPRFYARIR--KVFAPEFKLRFTWLEPSPDDASEIAWVKNELPYACGKFT 596

Query: 976  LGKTVVLTQLSDSRMFSHKSEAKVCGI-HKYEIIPRKGELWALYKNFDSEMTCSELVKYE 1152
             G+T    + +D  MFSH+   +  GI + Y + PRKGE WA+YKN++++ + +  +  +
Sbjct: 597  YGQT---EETADLPMFSHQVHGEKGGIRNSYFVYPRKGETWAIYKNWNTDWSSNPEIHRK 653

Query: 1153 YDIEF 1167
            Y+ E+
Sbjct: 654  YEFEY 658


>emb|CBI34299.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score = 98.2 bits (243), Expect(2) = 5e-19
 Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTFPDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFRL 978
            +WA+    D MPKNYAQ+  I+  P F+L + +LE    PK + Q      PV CG F+L
Sbjct: 654  LWALYSEVDRMPKNYAQVKKIEPTPSFRLHVVFLEACSPPKDMVQ------PVCCGTFKL 707

Query: 979  --GKTVVLTQLSDSRMFSHKSEAKVCGIHKYEIIPRKGELWALYKNFDSEMTCSELVKYE 1152
              GKT V  +      FSH+  A+  G +K+ I+P KG++WALYKN+++ + CS++V  +
Sbjct: 708  KNGKTKVFPRAD----FSHQIRAESIGKNKFAILPIKGQVWALYKNWENNLMCSDIVNCK 763

Query: 1153 YDI 1161
            YDI
Sbjct: 764  YDI 766



 Score = 23.5 bits (49), Expect(2) = 5e-19
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 743 YDFEADRKPWKFQHHQIW 796
           YDF  ++   KFQ  Q+W
Sbjct: 638 YDFSGEKSEEKFQTGQLW 655



 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTF-PDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFR 975
            IWA+    D MP+ YA+I   K F P+FKL  TWLEP         W + E+P ACG  R
Sbjct: 373  IWAIYDPIDGMPRFYARIR--KVFAPEFKLRFTWLEPSPDDASEIAWVKNELPYACGGIR 430

Query: 976  LGKTVVLTQLSDSRMFSHKSEAKVCGIHKYEIIPRKGELWALYKNFDSEMTCSELVKYEY 1155
                                       + Y + PRKGE WA+YKN++++ + +  +  +Y
Sbjct: 431  ---------------------------NSYFVYPRKGETWAIYKNWNTDWSSNPEIHRKY 463

Query: 1156 DIEF 1167
            + E+
Sbjct: 464  EFEY 467


>ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|222863516|gb|EEF00647.1|
            predicted protein [Populus trichocarpa]
          Length = 866

 Score = 96.7 bits (239), Expect(2) = 2e-18
 Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTFPDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFRL 978
            IW++    D +PK Y QI  I++   FKL + WL P   PK V QW +K+MP  CG F+ 
Sbjct: 662  IWSLYSDEDGLPKYYGQIMKIQSDQGFKLWLRWLTPCSLPKTVIQWQDKKMPTCCGRFK- 720

Query: 979  GKTVVLTQLSDSRMFSHKSEAKVCG-IHKYEIIPRKGELWALYKNFDSEMTCSELVKYEY 1155
             K   L   S +  FSH+   +  G  ++Y I+PRKGE+WALYKN+  E+  S+L   EY
Sbjct: 721  AKNGKLNYYSSTTSFSHRLAVEFDGKRNEYTILPRKGEVWALYKNWFPEIKHSDLENCEY 780

Query: 1156 DI 1161
            D+
Sbjct: 781  DV 782



 Score = 23.1 bits (48), Expect(2) = 2e-18
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 713 DSTQLGYKVHYDFEADRKPWKFQHHQIW 796
           D+ ++     ++F+A++   KFQ  QIW
Sbjct: 636 DAIEIPESEFFNFDAEKSIEKFQVGQIW 663



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTFPDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFRL 978
            +WAV    DAMP+ YAQI  + + P F L ITWLE     +   +W E+ +PVACG F+ 
Sbjct: 407  VWAVYDTLDAMPRFYAQIKKVVS-PGFNLRITWLEACPDDQNEAEWVEEGLPVACGKFKN 465

Query: 979  GKTVVLTQLSDSR-MFSHKSEAKVCG-IHKYEIIPRKGELWALYKNFDSEMTCSELVKYE 1152
            GK    +Q +D R MFSH  + +  G  + Y+I PRKGE WAL+KN+D +   +     +
Sbjct: 466  GK----SQYTDKRLMFSHLIDLEESGQRNTYKIFPRKGETWALFKNWDLKWISNADAHQD 521

Query: 1153 YDIEF 1167
            Y+ EF
Sbjct: 522  YEYEF 526


>ref|XP_004163100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229241
            [Cucumis sativus]
          Length = 938

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 56/123 (45%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTFPD-FKLSITWLEPDGAPKGVQQWFEKEMPVACGMFR 975
            IWA+    D MP+ YA I   K FP  FK+ ITWLEP+ +  G ++  +KEMPV+CG F 
Sbjct: 452  IWAMYDDIDTMPRFYAWIK--KVFPSGFKVQITWLEPEASVDGRRKCVDKEMPVSCGEFV 509

Query: 976  LGKTVVLTQLSDSRMFSHKSEAKVCGIHK--YEIIPRKGELWALYKNFDSEMTCSELVKY 1149
             G T  +T      M SH + A   G HK  + I PRKGE+WAL+KN+D +  C   V+Y
Sbjct: 510  FGATETMTDCDS--MLSH-AVAWDKGYHKDSFRIYPRKGEIWALFKNWDKKSECDSNVQY 566

Query: 1150 EYD 1158
            EY+
Sbjct: 567  EYE 569



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 41/121 (33%), Positives = 66/121 (54%)
 Frame = +1

Query: 799  IWAVNCRFDAMPKNYAQINWIKTFPDFKLSITWLEPDGAPKGVQQWFEKEMPVACGMFRL 978
            +W++    DA+P+ Y  I  +   P F++ +TWL     P    +W +K+MP++CG F +
Sbjct: 736  VWSLYSDEDALPRYYGLIKKVTREP-FEVKLTWLVSSTLPSDTVKWHDKQMPISCGRFTI 794

Query: 979  GKTVVLTQLSDSRMFSHKSEAKVCGIHKYEIIPRKGELWALYKNFDSEMTCSELVKYEYD 1158
             +   + + +    FSH         + + I PR GE+WALYKN+  E+ CS+L   EYD
Sbjct: 795  QRRTPMHRCTTIDSFSHLLRTDPAPNNAFSISPRIGEVWALYKNWTPELRCSDLDNCEYD 854

Query: 1159 I 1161
            I
Sbjct: 855  I 855


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