BLASTX nr result
ID: Coptis25_contig00007028
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007028 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28 emb|CBI39683.3| unnamed protein product [Vitis vinifera] 130 1e-28 emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera] 130 1e-28 ref|XP_002323212.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-25 ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containi... 119 2e-25 >ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Vitis vinifera] Length = 603 Score = 130 bits (326), Expect = 1e-28 Identities = 62/90 (68%), Positives = 70/90 (77%) Frame = -2 Query: 271 GNGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVS 92 GNGLI A +VFEEMP RDLV+WNSMISCY Q GLHEEALK+Y +M+ VG D FTLVS Sbjct: 173 GNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVS 232 Query: 91 LLSSCAHVGALSFGVQMHKFVDENGFMGNV 2 LLSSCAHVGAL GVQMH+F E + N+ Sbjct: 233 LLSSCAHVGALHMGVQMHRFAGERRLVENI 262 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/74 (37%), Positives = 40/74 (54%) Frame = -2 Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86 G + +A +F MP RD+ WNSMI Y G +EA+ + M GV ++ T + LL Sbjct: 276 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 335 Query: 85 SSCAHVGALSFGVQ 44 C+H G + GVQ Sbjct: 336 CGCSHQGLVKEGVQ 349 >emb|CBI39683.3| unnamed protein product [Vitis vinifera] Length = 585 Score = 130 bits (326), Expect = 1e-28 Identities = 62/90 (68%), Positives = 70/90 (77%) Frame = -2 Query: 271 GNGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVS 92 GNGLI A +VFEEMP RDLV+WNSMISCY Q GLHEEALK+Y +M+ VG D FTLVS Sbjct: 155 GNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVS 214 Query: 91 LLSSCAHVGALSFGVQMHKFVDENGFMGNV 2 LLSSCAHVGAL GVQMH+F E + N+ Sbjct: 215 LLSSCAHVGALHMGVQMHRFAGERRLVENI 244 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/74 (37%), Positives = 40/74 (54%) Frame = -2 Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86 G + +A +F MP RD+ WNSMI Y G +EA+ + M GV ++ T + LL Sbjct: 258 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 317 Query: 85 SSCAHVGALSFGVQ 44 C+H G + GVQ Sbjct: 318 CGCSHQGLVKEGVQ 331 >emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera] Length = 978 Score = 130 bits (326), Expect = 1e-28 Identities = 62/90 (68%), Positives = 70/90 (77%) Frame = -2 Query: 271 GNGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVS 92 GNGLI A +VFEEMP RDLV+WNSMISCY Q GLHEEALK+Y +M+ VG D FTLVS Sbjct: 548 GNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVS 607 Query: 91 LLSSCAHVGALSFGVQMHKFVDENGFMGNV 2 LLSSCAHVGAL GVQMH+F E + N+ Sbjct: 608 LLSSCAHVGALHMGVQMHRFAGERRLVENI 637 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/74 (37%), Positives = 40/74 (54%) Frame = -2 Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86 G + +A +F MP RD+ WNSMI Y G +EA+ + M GV ++ T + LL Sbjct: 651 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 710 Query: 85 SSCAHVGALSFGVQ 44 C+H G + GVQ Sbjct: 711 CGCSHQGLVKEGVQ 724 >ref|XP_002323212.1| predicted protein [Populus trichocarpa] gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa] Length = 584 Score = 120 bits (301), Expect = 1e-25 Identities = 57/93 (61%), Positives = 70/93 (75%), Gaps = 1/93 (1%) Frame = -2 Query: 277 CQG-NGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFT 101 C G NG + A VF+ MP RDLVAWN+MISCYSQAG H+EAL+VY M++ VGVD FT Sbjct: 154 CYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQEALRVYDYMRNENVGVDGFT 213 Query: 100 LVSLLSSCAHVGALSFGVQMHKFVDENGFMGNV 2 LV LLSSC+HVGAL+ GV++H+ E G + NV Sbjct: 214 LVGLLSSCSHVGALNMGVKLHRIASEKGLLRNV 246 >ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56550-like [Cucumis sativus] Length = 579 Score = 119 bits (299), Expect = 2e-25 Identities = 54/83 (65%), Positives = 69/83 (83%) Frame = -2 Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86 GL+ A +VF++MP RDLVAWN+MISC+SQ GLH+EAL+ Y++M+S V VD FTLV L+ Sbjct: 154 GLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLI 213 Query: 85 SSCAHVGALSFGVQMHKFVDENG 17 SSCAH+GAL+ GVQMH+F ENG Sbjct: 214 SSCAHLGALNIGVQMHRFARENG 236