BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007028
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CBI39683.3| unnamed protein product [Vitis vinifera]              130   1e-28
emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]   130   1e-28
ref|XP_002323212.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25

>ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
           [Vitis vinifera]
          Length = 603

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/90 (68%), Positives = 70/90 (77%)
 Frame = -2

Query: 271 GNGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVS 92
           GNGLI  A +VFEEMP RDLV+WNSMISCY Q GLHEEALK+Y +M+   VG D FTLVS
Sbjct: 173 GNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVS 232

Query: 91  LLSSCAHVGALSFGVQMHKFVDENGFMGNV 2
           LLSSCAHVGAL  GVQMH+F  E   + N+
Sbjct: 233 LLSSCAHVGALHMGVQMHRFAGERRLVENI 262



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%)
 Frame = -2

Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86
           G + +A  +F  MP RD+  WNSMI  Y   G  +EA+  +  M   GV  ++ T + LL
Sbjct: 276 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 335

Query: 85  SSCAHVGALSFGVQ 44
             C+H G +  GVQ
Sbjct: 336 CGCSHQGLVKEGVQ 349


>emb|CBI39683.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/90 (68%), Positives = 70/90 (77%)
 Frame = -2

Query: 271 GNGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVS 92
           GNGLI  A +VFEEMP RDLV+WNSMISCY Q GLHEEALK+Y +M+   VG D FTLVS
Sbjct: 155 GNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVS 214

Query: 91  LLSSCAHVGALSFGVQMHKFVDENGFMGNV 2
           LLSSCAHVGAL  GVQMH+F  E   + N+
Sbjct: 215 LLSSCAHVGALHMGVQMHRFAGERRLVENI 244



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%)
 Frame = -2

Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86
           G + +A  +F  MP RD+  WNSMI  Y   G  +EA+  +  M   GV  ++ T + LL
Sbjct: 258 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 317

Query: 85  SSCAHVGALSFGVQ 44
             C+H G +  GVQ
Sbjct: 318 CGCSHQGLVKEGVQ 331


>emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
          Length = 978

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/90 (68%), Positives = 70/90 (77%)
 Frame = -2

Query: 271 GNGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVS 92
           GNGLI  A +VFEEMP RDLV+WNSMISCY Q GLHEEALK+Y +M+   VG D FTLVS
Sbjct: 548 GNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVS 607

Query: 91  LLSSCAHVGALSFGVQMHKFVDENGFMGNV 2
           LLSSCAHVGAL  GVQMH+F  E   + N+
Sbjct: 608 LLSSCAHVGALHMGVQMHRFAGERRLVENI 637



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%)
 Frame = -2

Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86
           G + +A  +F  MP RD+  WNSMI  Y   G  +EA+  +  M   GV  ++ T + LL
Sbjct: 651 GSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLL 710

Query: 85  SSCAHVGALSFGVQ 44
             C+H G +  GVQ
Sbjct: 711 CGCSHQGLVKEGVQ 724


>ref|XP_002323212.1| predicted protein [Populus trichocarpa] gi|222867842|gb|EEF04973.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/93 (61%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = -2

Query: 277 CQG-NGLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFT 101
           C G NG +  A  VF+ MP RDLVAWN+MISCYSQAG H+EAL+VY  M++  VGVD FT
Sbjct: 154 CYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQEALRVYDYMRNENVGVDGFT 213

Query: 100 LVSLLSSCAHVGALSFGVQMHKFVDENGFMGNV 2
           LV LLSSC+HVGAL+ GV++H+   E G + NV
Sbjct: 214 LVGLLSSCSHVGALNMGVKLHRIASEKGLLRNV 246


>ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g56550-like [Cucumis sativus]
          Length = 579

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/83 (65%), Positives = 69/83 (83%)
 Frame = -2

Query: 265 GLITAAERVFEEMPVRDLVAWNSMISCYSQAGLHEEALKVYSRMKSYGVGVDTFTLVSLL 86
           GL+  A +VF++MP RDLVAWN+MISC+SQ GLH+EAL+ Y++M+S  V VD FTLV L+
Sbjct: 154 GLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLI 213

Query: 85  SSCAHVGALSFGVQMHKFVDENG 17
           SSCAH+GAL+ GVQMH+F  ENG
Sbjct: 214 SSCAHLGALNIGVQMHRFARENG 236