BLASTX nr result

ID: Coptis25_contig00007014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007014
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634404.1| PREDICTED: uncharacterized protein LOC100854...   211   2e-52
ref|XP_002307449.1| predicted protein [Populus trichocarpa] gi|2...   190   6e-46
ref|XP_002520339.1| conserved hypothetical protein [Ricinus comm...   175   1e-41
ref|NP_001154356.1| uncharacterized protein [Arabidopsis thalian...   166   7e-39
ref|XP_003602036.1| hypothetical protein MTR_3g088090 [Medicago ...   164   3e-38

>ref|XP_003634404.1| PREDICTED: uncharacterized protein LOC100854126 [Vitis vinifera]
          Length = 234

 Score =  211 bits (538), Expect = 2e-52
 Identities = 112/233 (48%), Positives = 142/233 (60%), Gaps = 4/233 (1%)
 Frame = +3

Query: 24  MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 203
           MGNV  SFFSGF  V+G LFGSP+DFLSGKSC+SVCG TWD ICYIENFCVANLLK    
Sbjct: 1   MGNVIGSFFSGFARVIGDLFGSPLDFLSGKSCSSVCGITWDFICYIENFCVANLLKIAMV 60

Query: 204 XXXXXXXXXXXXXXHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 383
                          K GIC CIGR+LCK++WAC  SC  A EY C FLC  + +LKR  
Sbjct: 61  SFLLYIVLLFFYLLCKLGICNCIGRSLCKMVWACFISCFSAWEYCCTFLCVKLPRLKRTN 120

Query: 384 RNHRREFDQENYLSDKE-ESTSYSH-SRRSIEXXXXXXXXXXXXXXIHLQKSLRPRSHRI 557
           R H ++F   +   D E +S  +S+ + R IE               HL+KSLRPRSH+I
Sbjct: 121 RGHIKDFQVSDSSCDGEGDSEIFSYNAHRPIEVRRPPSRRWRDHRASHLRKSLRPRSHQI 180

Query: 558 RVDVSRNAL--SANGMVDHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYQRPR 710
           RV +SR+++  S    + H  + +TVH I+V +TSKF +KG +    V++  R
Sbjct: 181 RVGISRDSVHSSRRNSIKHDNYINTVHGIRVTRTSKFVQKGLSFKGTVHRSRR 233


>ref|XP_002307449.1| predicted protein [Populus trichocarpa] gi|222856898|gb|EEE94445.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  190 bits (482), Expect = 6e-46
 Identities = 98/233 (42%), Positives = 131/233 (56%), Gaps = 3/233 (1%)
 Frame = +3

Query: 24  MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 203
           MGN+  SF SGF  V+G LFGSP+DFL+GKSC+SVC + WD  CYIENFCVA+LLK    
Sbjct: 1   MGNIIISFLSGFTKVIGDLFGSPLDFLAGKSCSSVCASPWDFFCYIENFCVASLLKMVAV 60

Query: 204 XXXXXXXXXXXXXXHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 383
                         +KTGIC C+G +LCK  WACL +      Y C+F+   +  LKR R
Sbjct: 61  LALLYIVLLFFYLLYKTGICQCVGHSLCKTAWACLVAWFSMWGYCCIFMSDKLIMLKRVR 120

Query: 384 RNHRREFDQENYLSDKEESTSYSHSRRSIEXXXXXXXXXXXXXXIHLQKSLRPRSHRIRV 563
             HR   D   + + +E+   + H  R++E              +HL+KSLRPRSHRIRV
Sbjct: 121 HGHRS--DSSEFDTSEED---FDHIPRTMEISGSSSRRTRDYRRVHLRKSLRPRSHRIRV 175

Query: 564 DVSRNALSANGMV---DHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYQRPRR 713
            +  +    +G +    H KH ST+H+I+V  TS+F +K      + Y R RR
Sbjct: 176 GLGSDFDYGSGRIPNAKHGKHFSTIHSIRVTHTSQFVRKRAGFRGRAYPRQRR 228


>ref|XP_002520339.1| conserved hypothetical protein [Ricinus communis]
           gi|223540558|gb|EEF42125.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  175 bits (444), Expect = 1e-41
 Identities = 96/233 (41%), Positives = 128/233 (54%), Gaps = 4/233 (1%)
 Frame = +3

Query: 24  MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 203
           MGN+  SF SGF N +  LF SP+DFLSGKSC+SVCG+TWD +CYIENFCVANLLK    
Sbjct: 1   MGNIIKSFTSGFTNTISDLFTSPLDFLSGKSCSSVCGSTWDFVCYIENFCVANLLKLAMV 60

Query: 204 XXXXXXXXXXXXXXHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 383
                         +K  I  C+G +LCK+ WAC+       +  C FL  ++  LKR  
Sbjct: 61  LALLYIVLLLIYLLYKLRIFECVGHSLCKLAWACMVCWISLWKNCCFFLRDSLIMLKRVS 120

Query: 384 RNHRREFDQENYLSDKEESTSYSHSRRSIE-XXXXXXXXXXXXXXIHLQKSLRPRSHRIR 560
            +HRR+  +     D  E   Y +  R+++                HL++SLRP+SHRIR
Sbjct: 121 HHHRRDSSE----FDTSEDDCYDYEHRTMDVSSRPLSRQMMDYRTAHLRRSLRPKSHRIR 176

Query: 561 VDVSRNALSANGMVDHYK---HHSTVHNIKVAKTSKFAKKGGNVNNKVYQRPR 710
           V +S  +    G   H K   H STV+NI+V ++SKF +KG N   K + R R
Sbjct: 177 VGLSTGSEHGYGRYHHIKHANHGSTVNNIRVIQSSKFVRKGINHRRKGHSRER 229


>ref|NP_001154356.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5263325|gb|AAD41427.1|AC007727_16 F8K7.16
           [Arabidopsis thaliana] gi|332192026|gb|AEE30147.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 233

 Score =  166 bits (421), Expect = 7e-39
 Identities = 88/237 (37%), Positives = 125/237 (52%), Gaps = 8/237 (3%)
 Frame = +3

Query: 24  MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCNSVCGATWDLICYIENFCVANLLKXXXX 203
           MGNV  SFF+GF + +G  FGSP+DFLSGKSC+SVC + WD ICY+ENFCVANL K    
Sbjct: 1   MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICYVENFCVANLAKTALI 60

Query: 204 XXXXXXXXXXXXXXHKTGICYCIGRTLCKILWACLASCCYACEYGCMFLCHNMKKLKRQR 383
                         +K G  +CI     K+LW  ++   Y   Y C F C+++   KR+R
Sbjct: 61  LILSYFFLFFIYMLYKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKRRR 120

Query: 384 RNHRREFDQENYLS--------DKEESTSYSHSRRSIEXXXXXXXXXXXXXXIHLQKSLR 539
           R     + +E+Y          D + S +Y  S+R                   L+KSLR
Sbjct: 121 RRRHNRYIEEDYDDNSDDDDDVDDDGSFTYHRSKRECRKEE------------RLRKSLR 168

Query: 540 PRSHRIRVDVSRNALSANGMVDHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYQRPR 710
           PR+HR+RV V ++  S +G+  H    S +H ++V++ SKFA+K     N+V+   R
Sbjct: 169 PRNHRVRVGVRKDHRSDSGLSQHADGGSPIHGVRVSRESKFARKVSKRRNRVHHGDR 225


>ref|XP_003602036.1| hypothetical protein MTR_3g088090 [Medicago truncatula]
           gi|355491084|gb|AES72287.1| hypothetical protein
           MTR_3g088090 [Medicago truncatula]
          Length = 248

 Score =  164 bits (416), Expect = 3e-38
 Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 24/254 (9%)
 Frame = +3

Query: 24  MGNVFTSFFSGFGNVLGKLFGSPIDFLSGKSCN--SVCGATWDLICYIENFCVANLLKXX 197
           MGNV  S  SGFG  +G +F SP++FLSGKSC+   VCG TWDL CYIE FCVANLL+  
Sbjct: 1   MGNVIESLASGFGEAVGNIFSSPLEFLSGKSCSVLEVCGPTWDLSCYIEIFCVANLLRLA 60

Query: 198 XXXXXXXXXXXXXXXX------HKTGICYCIGRTLCKILWACLASCCYACEYGCMFLC-- 353
                                 +K GI  C+  + CK++WAC +SC +   Y C FLC  
Sbjct: 61  VVFVLLYIGEFNCFVFLFFYVLYKLGIIRCLCHSACKLIWACFSSCFHIWVYSCTFLCVK 120

Query: 354 -HNMKKLKRQRRNHRREFDQENYLSDKEESTSYSHSRRSIEXXXXXXXXXXXXXXIHLQK 530
            HN+K  +R+RR  R E ++E Y+   +ES SY H   S E               HL+K
Sbjct: 121 LHNVK--RRRRRKFRMEMNEEEYI---DESLSY-HLPVSAELSRSFSRRRRDYKGHHLRK 174

Query: 531 SLRPRSHRIRVDVSRN-------------ALSANGMVDHYKHHSTVHNIKVAKTSKFAKK 671
           SL+P+  R +V++SRN                ++ ++ H  +   VH+IKV +TSKFA+K
Sbjct: 175 SLKPKRGRAQVEISRNFSYKNKSNHIIRDPCCSSNVIKHGNYKVMVHDIKVTQTSKFARK 234

Query: 672 GGNVNNKVYQRPRR 713
             N   +V +R RR
Sbjct: 235 CMNNRKRVIRRQRR 248


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