BLASTX nr result

ID: Coptis25_contig00007007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007007
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520687.1| conserved hypothetical protein [Ricinus comm...   116   2e-24
ref|XP_002320367.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|AFK39717.1| unknown [Lotus japonicus]                               97   1e-18
ref|XP_002320652.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_003625860.1| hypothetical protein MTR_7g108070, partial [...    95   5e-18

>ref|XP_002520687.1| conserved hypothetical protein [Ricinus communis]
           gi|223540072|gb|EEF41649.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 64/81 (79%)
 Frame = -3

Query: 243 EDADSFAKRAEMYYKKRPELINMVEDFYRTHRCLAERFDMLKSEPRTRLLTPLSSPFSTK 64
           EDADSFA+RAEMYYKKRPELI+MVEDFYRTHR LAER+D LKS+   RLLT L SPFS K
Sbjct: 49  EDADSFAQRAEMYYKKRPELISMVEDFYRTHRSLAERYDQLKSDSGNRLLTTLGSPFSAK 108

Query: 63  YPSNKSMSPKGKYYDSYSETY 1
           Y S K M    +  DS+SETY
Sbjct: 109 YQSQKFMGGMDRADDSHSETY 129


>ref|XP_002320367.1| predicted protein [Populus trichocarpa] gi|222861140|gb|EEE98682.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/80 (67%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -3

Query: 240 DADSFAKRAEMYYKKRPELINMVEDFYRTHRCLAERFDMLKSEPRTRLLTPLSSPFSTKY 61
           DADSFA+RA MYYKKRPELI+MVEDFYR HR LAER+D LKS+   RLL    SPFSTK+
Sbjct: 44  DADSFAQRAGMYYKKRPELISMVEDFYRAHRLLAERYDQLKSDSGNRLLATFGSPFSTKH 103

Query: 60  PSNKSMSPK-GKYYDSYSET 4
              K MS K  + YDS+SET
Sbjct: 104 RPEKLMSVKTDQTYDSHSET 123


>gb|AFK39717.1| unknown [Lotus japonicus]
          Length = 193

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = -3

Query: 243 EDADSFAKRAEMYYKKRPELINMVEDFYRTHRCLAERFDMLKSEPRTRLLTPLSSPF-ST 67
           EDADSFA+RAEMYYKKRPEL++MVEDFYRTHR LAER+D +K +     LT   SPF S 
Sbjct: 47  EDADSFAQRAEMYYKKRPELVSMVEDFYRTHRSLAERYDQVKPDTGISHLTTGGSPFASA 106

Query: 66  KYPSNKSMSPKGKYYDSYSE 7
           KY   K MS     YD+YSE
Sbjct: 107 KYQIEKLMSFADNGYDTYSE 126


>ref|XP_002320652.1| predicted protein [Populus trichocarpa] gi|222861425|gb|EEE98967.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/75 (64%), Positives = 55/75 (73%)
 Frame = -3

Query: 240 DADSFAKRAEMYYKKRPELINMVEDFYRTHRCLAERFDMLKSEPRTRLLTPLSSPFSTKY 61
           DADSFA+RAEMYYKKRPELI+MVEDFYR HR LAER+D LKS+   RLL     PFSTK+
Sbjct: 46  DADSFAQRAEMYYKKRPELISMVEDFYRAHRSLAERYDQLKSDSGNRLLATFGLPFSTKH 105

Query: 60  PSNKSMSPKGKYYDS 16
              K +S +    DS
Sbjct: 106 RPEKLLSKQTHIEDS 120


>ref|XP_003625860.1| hypothetical protein MTR_7g108070, partial [Medicago truncatula]
           gi|355500875|gb|AES82078.1| hypothetical protein
           MTR_7g108070, partial [Medicago truncatula]
          Length = 253

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/82 (60%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = -3

Query: 243 EDADSFAKRAEMYYKKRPELINMVEDFYRTHRCLAERFDMLKSEPRTRLLTPLSSPF-ST 67
           EDADSFAKRAEMYYKKRPEL++MVEDFYR+HR LAER+D +K +     L    SPF S 
Sbjct: 48  EDADSFAKRAEMYYKKRPELVSMVEDFYRSHRSLAERYDQVKPDTGNGHLVLGGSPFASA 107

Query: 66  KYPSNKSMSPKGKYYDSYSETY 1
           KY   K MS     YD+YSE +
Sbjct: 108 KYQLEKLMSFADTGYDTYSENF 129


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