BLASTX nr result

ID: Coptis25_contig00007001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007001
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002326895.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002510343.1| conserved hypothetical protein [Ricinus comm...   109   3e-22
ref|XP_002283430.2| PREDICTED: uncharacterized protein LOC100247...   105   3e-21
ref|XP_004152712.1| PREDICTED: uncharacterized protein LOC101220...   103   1e-20

>ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|222844199|gb|EEE81746.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 DDDDLECESMQWSVLDTASDDTQKSQRPRNRPRKAVGSSHKKINRSLSCHSQSKSSILT- 77
           +DDDLE E++QW+ LD ASDDTQKS R RNR  K+ GSSHK ++RSLSC SQSK SI T 
Sbjct: 94  EDDDLEFENVQWNGLDMASDDTQKSHRSRNRTHKSTGSSHKTMSRSLSCDSQSKGSISTP 153

Query: 76  RNATKVDLGKLETTALRRYWRHFKL 2
           R   KVDL KLE  AL RYWRHF L
Sbjct: 154 RGTAKVDLSKLEVAALWRYWRHFNL 178


>ref|XP_002326895.1| predicted protein [Populus trichocarpa] gi|222835210|gb|EEE73645.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 DDDDLECESMQWSVLDTASDDTQKSQRPRNRPRKAVGSSHKKINRSLSCHSQSKSSILT- 77
           DDDDLE +++QW+ LD AS DTQKS R RNR  K+ GSSHK ++RSLSC SQSK S+ T 
Sbjct: 98  DDDDLEFDNVQWNGLDMASYDTQKSHRSRNRTHKSTGSSHKTMSRSLSCDSQSKGSVSTP 157

Query: 76  RNATKVDLGKLETTALRRYWRHFKL 2
           R  TKVDL KLE  AL RYWRHF L
Sbjct: 158 RGTTKVDLSKLEMAALWRYWRHFNL 182


>ref|XP_002510343.1| conserved hypothetical protein [Ricinus communis]
           gi|223551044|gb|EEF52530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 DDDDLECESMQWSVLDTASDDTQKSQRPRNRPRKAVGSSHKKINRSLSCHSQSKSSILT- 77
           DDDDLE +++QW+  D ASDDTQKS R R+R  K+ GSSHK ++RSLSC SQSKSS+ T 
Sbjct: 94  DDDDLEFDNVQWNGSDLASDDTQKSHRSRHRTHKSTGSSHKTMSRSLSCDSQSKSSVSTP 153

Query: 76  RNATKVDLGKLETTALRRYWRHFKL 2
           R ATKVDL KLE  AL RYW++F L
Sbjct: 154 RGATKVDLSKLEMAALWRYWKYFNL 178


>ref|XP_002283430.2| PREDICTED: uncharacterized protein LOC100247103 isoform 1 [Vitis
           vinifera] gi|302142443|emb|CBI19646.3| unnamed protein
           product [Vitis vinifera]
          Length = 223

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 DDDDLECESMQWSVLDTASDDTQKSQRPRNRPRKAVGSSHKKINRSLSCHSQSKSSILT- 77
           +DDDLE E+MQW+  D ASDDTQKS R R+R  K+ GSSHK ++RSLSC SQSK SI T 
Sbjct: 93  EDDDLEFENMQWNGSDMASDDTQKSHRSRHRTHKSSGSSHKTMSRSLSCDSQSKGSISTP 152

Query: 76  RNATKVDLGKLETTALRRYWRHFKL 2
           R +TKVDL KLE  AL RY RHF L
Sbjct: 153 RGSTKVDLSKLEMAALWRYLRHFNL 177


>ref|XP_004152712.1| PREDICTED: uncharacterized protein LOC101220556 [Cucumis sativus]
           gi|449496053|ref|XP_004160024.1| PREDICTED:
           uncharacterized LOC101220556 [Cucumis sativus]
          Length = 223

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = -3

Query: 253 DDDDLECESMQWSVLDTASDDTQKSQRPRNRPRKAVGSSHKKINRSLSCHSQSKSSI-LT 77
           +DDDLE E++QW+ +D ASDD QKS + R++  K+ GSSHK ++RSLSC SQSKSS+   
Sbjct: 93  EDDDLEFENLQWNRIDMASDDAQKSHKSRHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAP 152

Query: 76  RNATKVDLGKLETTALRRYWRHFKL 2
           + +TKVDL KLE  AL RYWRHF L
Sbjct: 153 QGSTKVDLSKLEMAALWRYWRHFNL 177


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