BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006999
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis ...   325   9e-87
ref|XP_002311076.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crys...   317   3e-84
ref|XP_002316386.1| predicted protein [Populus trichocarpa] gi|1...   316   7e-84
gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]                 311   2e-82

>ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
           gi|147864853|emb|CAN79376.1| hypothetical protein
           VITISV_009584 [Vitis vinifera]
           gi|296085986|emb|CBI31427.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  325 bits (834), Expect = 9e-87
 Identities = 165/193 (85%), Positives = 175/193 (90%)
 Frame = +3

Query: 210 DRNSTARLTGFNSESNGATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 389
           DRNS  RL G N+E+ GA D+KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA
Sbjct: 9   DRNS-GRLGGLNAENGGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 67

Query: 390 SFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRXXXXXXXXYDITSPESFNKAQYW 569
           SFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYR        YDITSPESFNKAQYW
Sbjct: 68  SFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESFNKAQYW 127

Query: 570 VKELQKHGSPDIVMALVGNKADLQDSRQVPIQDAMDYAEKNGMFFIETSAKTADNINQLF 749
           VKELQKHGSPDIVMALVGNKADL ++R+VP+QD +DYAEKNGMFFIETSAKTADNINQLF
Sbjct: 128 VKELQKHGSPDIVMALVGNKADLHENREVPVQDGIDYAEKNGMFFIETSAKTADNINQLF 187

Query: 750 EEIAKRLPRTLSS 788
           EEIAKRLPR  SS
Sbjct: 188 EEIAKRLPRPSSS 200


>ref|XP_002311076.1| predicted protein [Populus trichocarpa] gi|222850896|gb|EEE88443.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  318 bits (816), Expect = 1e-84
 Identities = 162/195 (83%), Positives = 172/195 (88%), Gaps = 1/195 (0%)
 Frame = +3

Query: 207 LDRNSTARLTGFN-SESNGATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTV 383
           L   ST RL G N SES G  D+KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT+
Sbjct: 7   LPDRSTGRLGGLNNSESGGVVDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTI 66

Query: 384 GASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRXXXXXXXXYDITSPESFNKAQ 563
           GASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYR        YDITSPE+FNKAQ
Sbjct: 67  GASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPETFNKAQ 126

Query: 564 YWVKELQKHGSPDIVMALVGNKADLQDSRQVPIQDAMDYAEKNGMFFIETSAKTADNINQ 743
           YWVKELQKHGSPDIVMALVGNKADLQ+ R+VP QD +DYAEKNGMFF+ETSAKTADNINQ
Sbjct: 127 YWVKELQKHGSPDIVMALVGNKADLQEKREVPTQDGIDYAEKNGMFFMETSAKTADNINQ 186

Query: 744 LFEEIAKRLPRTLSS 788
           LFEEIAKRLPR  S+
Sbjct: 187 LFEEIAKRLPRPSST 201


>emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crystallinum]
          Length = 201

 Score =  317 bits (812), Expect = 3e-84
 Identities = 160/193 (82%), Positives = 170/193 (88%)
 Frame = +3

Query: 210 DRNSTARLTGFNSESNGATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 389
           DR  +   +  NS + GA+D+KNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA
Sbjct: 9   DRTVSRGSSSLNSANEGASDAKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 68

Query: 390 SFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRXXXXXXXXYDITSPESFNKAQYW 569
           SFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYR        YDITSPESF KAQYW
Sbjct: 69  SFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFTKAQYW 128

Query: 570 VKELQKHGSPDIVMALVGNKADLQDSRQVPIQDAMDYAEKNGMFFIETSAKTADNINQLF 749
           VKELQKHGSPDI+MALVGNKADLQ+ R+VP QD ++YAEKNGMFFIETSAKTADNINQLF
Sbjct: 129 VKELQKHGSPDIIMALVGNKADLQERREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 188

Query: 750 EEIAKRLPRTLSS 788
           EEIAKRLPR L S
Sbjct: 189 EEIAKRLPRLLPS 201


>ref|XP_002316386.1| predicted protein [Populus trichocarpa] gi|118488888|gb|ABK96253.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222865426|gb|EEF02557.1| predicted protein [Populus
           trichocarpa]
          Length = 201

 Score =  316 bits (809), Expect = 7e-84
 Identities = 160/195 (82%), Positives = 171/195 (87%), Gaps = 1/195 (0%)
 Frame = +3

Query: 207 LDRNSTARLTGFN-SESNGATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTV 383
           L   ST RL G N SES G  D+KNL+VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVT+
Sbjct: 7   LPDRSTGRLGGLNNSESGGVADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTI 66

Query: 384 GASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRXXXXXXXXYDITSPESFNKAQ 563
           GASFLSQTIALQDS+T+KFEIWDTAGQERYAALAPLYYR        YDITSPE+FNKAQ
Sbjct: 67  GASFLSQTIALQDSTTIKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPETFNKAQ 126

Query: 564 YWVKELQKHGSPDIVMALVGNKADLQDSRQVPIQDAMDYAEKNGMFFIETSAKTADNINQ 743
           YWVKELQKHGSPDIVMALVGNKADL + R+VP QD ++YAEKNGMFFIETSAKTADNINQ
Sbjct: 127 YWVKELQKHGSPDIVMALVGNKADLHEKREVPTQDGIEYAEKNGMFFIETSAKTADNINQ 186

Query: 744 LFEEIAKRLPRTLSS 788
           LFEEIAKRLPR  S+
Sbjct: 187 LFEEIAKRLPRPSST 201


>gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
          Length = 200

 Score =  311 bits (796), Expect = 2e-82
 Identities = 160/191 (83%), Positives = 166/191 (86%)
 Frame = +3

Query: 204 VLDRNSTARLTGFNSESNGATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTV 383
           V DRNS  R  G N ++ GA D KNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTV
Sbjct: 7   VADRNS-GRAAGLNPDNGGAVDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTV 65

Query: 384 GASFLSQTIALQDSSTVKFEIWDTAGQERYAALAPLYYRXXXXXXXXYDITSPESFNKAQ 563
           GASFLSQTIALQDS+TVKFEIWDTAGQERYAALAPLYYR        YDITSPESF KAQ
Sbjct: 66  GASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESFAKAQ 125

Query: 564 YWVKELQKHGSPDIVMALVGNKADLQDSRQVPIQDAMDYAEKNGMFFIETSAKTADNINQ 743
           YWVKELQKHGSPDIVMALVGNKADL + R+V  QD +D AEKNGMFFIETSAKTADNINQ
Sbjct: 126 YWVKELQKHGSPDIVMALVGNKADLHEKREVTTQDGIDCAEKNGMFFIETSAKTADNINQ 185

Query: 744 LFEEIAKRLPR 776
           LFEEIAKRLPR
Sbjct: 186 LFEEIAKRLPR 196