BLASTX nr result

ID: Coptis25_contig00006988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006988
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274500.1| PREDICTED: ABC transporter I family member 1...   350   6e-94
ref|XP_004138625.1| PREDICTED: ABC transporter I family member 1...   338   1e-90
ref|XP_003622165.1| ABC transporter I family member [Medicago tr...   338   1e-90
ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|2...   334   4e-89
ref|XP_003553946.1| PREDICTED: ABC transporter I family member 1...   332   2e-88

>ref|XP_002274500.1| PREDICTED: ABC transporter I family member 11, chloroplastic [Vitis
            vinifera] gi|296082322|emb|CBI21327.3| unnamed protein
            product [Vitis vinifera]
          Length = 284

 Score =  350 bits (897), Expect = 6e-94
 Identities = 179/251 (71%), Positives = 205/251 (81%)
 Frame = -1

Query: 1236 SIFPRIKRFNFANPRPLNITSDYSCFEVKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFG 1057
            +I  R  R  F   R L I+ +YSC EV+GVSYRP GT+ +LL+DV+FSL EKS GLIFG
Sbjct: 32   AILTRPCRSKFWRIRNLRISCEYSCIEVRGVSYRPQGTEFDLLNDVNFSLPEKSFGLIFG 91

Query: 1056 RSGSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLA 877
            RSGSGKTTLLQLLAG++KPTSG+I +Q+YG+DGK  Q    LP ERVGI+FQFPERYF+A
Sbjct: 92   RSGSGKTTLLQLLAGINKPTSGSIFVQKYGDDGKLTQTSEPLPSERVGILFQFPERYFVA 151

Query: 876  DTVLEEVTFGWPRQRENIHLKEQLASGLQRAINSVGLNGISLDEDPHALSGGYKRRLALA 697
            D VLEEVTFGWPRQR +  LKE LA GL+RAIN VGLNGISLD+DPH+LSGGYKRRLALA
Sbjct: 152  DNVLEEVTFGWPRQRGSFQLKEHLALGLERAINWVGLNGISLDKDPHSLSGGYKRRLALA 211

Query: 696  IQLVKFPDLLILDEPLAGLDWKARADVVXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRM 517
            IQLV+ PDLLILDEPLAGLDWKARADVV            LVVSHDLKEL+ LVD+SWRM
Sbjct: 212  IQLVQIPDLLILDEPLAGLDWKARADVVELLKHLKKELTILVVSHDLKELAALVDRSWRM 271

Query: 516  EMGGLLKKEPM 484
            EMGG+LK+EP+
Sbjct: 272  EMGGVLKEEPI 282


>ref|XP_004138625.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
            [Cucumis sativus]
          Length = 274

 Score =  338 bits (868), Expect = 1e-90
 Identities = 171/244 (70%), Positives = 198/244 (81%)
 Frame = -1

Query: 1209 NFANPRPLNITSDYSCFEVKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFGRSGSGKTTL 1030
            N      L + S+YSCFEV+ +SYRPPGT+ +LL+ V+FSL EKS GLIFG+SGSGKTTL
Sbjct: 31   NSRRTNALTLKSNYSCFEVRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTL 90

Query: 1029 LQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTF 850
            LQLLAGLSKPTSG+I +Q+Y +DGKP Q+   L PERVGIVFQFPERYF+ D+VL EVTF
Sbjct: 91   LQLLAGLSKPTSGSICVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTF 150

Query: 849  GWPRQRENIHLKEQLASGLQRAINSVGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDL 670
            GWPRQR +  LKE LA  LQRAIN VGLNGI+LD+DPH+LSGGYKRRLALAIQLV+ PDL
Sbjct: 151  GWPRQRSDSDLKENLALRLQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDL 210

Query: 669  LILDEPLAGLDWKARADVVXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKE 490
            LILDEPLAGLDWKAR DVV            L+VSHDLKE + LVD SWRMEMGG+L++E
Sbjct: 211  LILDEPLAGLDWKARTDVVKLLKNLKKELTVLIVSHDLKEFAGLVDNSWRMEMGGVLREE 270

Query: 489  PMPI 478
            P+PI
Sbjct: 271  PLPI 274


>ref|XP_003622165.1| ABC transporter I family member [Medicago truncatula]
            gi|355497180|gb|AES78383.1| ABC transporter I family
            member [Medicago truncatula]
          Length = 280

 Score =  338 bits (868), Expect = 1e-90
 Identities = 180/267 (67%), Positives = 212/267 (79%), Gaps = 2/267 (0%)
 Frame = -1

Query: 1272 LAPPLNSLTTSLSIFPR--IKRFNFANPRPLNITSDYSCFEVKGVSYRPPGTQLNLLSDV 1099
            L PPL+S   SLS  P+     FN +  R       YS  EV+ VSY+PPGT+  LL+ V
Sbjct: 20   LKPPLSSFP-SLSRSPQSHCSFFNSSTTR-----CSYSSLEVRDVSYQPPGTEFKLLNSV 73

Query: 1098 HFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPER 919
            +FSL EKSLGLIFG+SGSGKTTLLQLLAG++KPTSG+I+IQ+YG+DG P+Q+P  L PER
Sbjct: 74   NFSLPEKSLGLIFGQSGSGKTTLLQLLAGINKPTSGSIHIQKYGDDGSPSQSPEPLVPER 133

Query: 918  VGIVFQFPERYFLADTVLEEVTFGWPRQRENIHLKEQLASGLQRAINSVGLNGISLDEDP 739
            VGIVFQFPERYF+ADTVL+EVTFGWPRQ+ N  L+E LA GLQRAIN VGL+GISLD++P
Sbjct: 134  VGIVFQFPERYFVADTVLDEVTFGWPRQKGNDQLRENLALGLQRAINWVGLSGISLDKNP 193

Query: 738  HALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXXXXXXXXLVVSHD 559
            H+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV            LVVSHD
Sbjct: 194  HSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHD 253

Query: 558  LKELSCLVDQSWRMEMGGLLKKEPMPI 478
            L+E + LVDQSWRMEMGG L++E +P+
Sbjct: 254  LREFASLVDQSWRMEMGGNLRQEFLPL 280


>ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|222839311|gb|EEE77648.1|
            predicted protein [Populus trichocarpa]
          Length = 234

 Score =  334 bits (856), Expect = 4e-89
 Identities = 165/226 (73%), Positives = 191/226 (84%)
 Frame = -1

Query: 1155 VKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQ 976
            VK VSYRPPGT+LNLL+ V FSL E+S GLIFG+SGSGKTTLLQLL+G+SKPTSG+I +Q
Sbjct: 9    VKDVSYRPPGTELNLLNKVTFSLPERSFGLIFGQSGSGKTTLLQLLSGISKPTSGSICVQ 68

Query: 975  RYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRENIHLKEQLASG 796
            RYG DG PNQ P QL PE+VGIVFQFPERYF+ADT+ +EVTFGWPR++ ++ L+E LA  
Sbjct: 69   RYGNDGNPNQLPEQLSPEKVGIVFQFPERYFVADTIADEVTFGWPRRKSSVQLREHLALN 128

Query: 795  LQRAINSVGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADV 616
            LQRA+N VGLNGISLD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADV
Sbjct: 129  LQRAVNWVGLNGISLDKDPHSLSGGYKRRLALAIQLVEVPDLLILDEPLAGLDWKARADV 188

Query: 615  VXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMPI 478
            V            LVVSHDLKEL+ LVD SWRMEMGG L++E +P+
Sbjct: 189  VKLLKHLKKELTILVVSHDLKELAALVDHSWRMEMGGFLREELLPV 234


>ref|XP_003553946.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
            [Glycine max]
          Length = 272

 Score =  332 bits (850), Expect = 2e-88
 Identities = 169/235 (71%), Positives = 195/235 (82%)
 Frame = -1

Query: 1182 ITSDYSCFEVKGVSYRPPGTQLNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSK 1003
            I S+YS FEV+ V+Y+PPGTQL LL+ V FSL EKS GLIFG+SGSGKTTLLQLLAG+SK
Sbjct: 38   INSNYSSFEVRDVTYQPPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISK 97

Query: 1002 PTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRENI 823
            PTSG+I IQ Y  DG P+Q P  L PERVGIVFQFPERYF+AD VL+EVTFGWPRQ+ N 
Sbjct: 98   PTSGSIYIQEYESDGNPSQPPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNH 157

Query: 822  HLKEQLASGLQRAINSVGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAG 643
            HL+E LA GLQRAIN VGL+GISL+++PH+LSGGYKRRLALAIQLV+ PDLLILDEPLAG
Sbjct: 158  HLRENLALGLQRAINWVGLSGISLNKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAG 217

Query: 642  LDWKARADVVXXXXXXXXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMPI 478
            LDWKARADVV            LVVSHDL+E + LVD+SWRMEMGG L++E +P+
Sbjct: 218  LDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLREEFLPL 272


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