BLASTX nr result

ID: Coptis25_contig00006977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006977
         (2629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   838   0.0  
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   837   0.0  
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   822   0.0  
ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   815   0.0  
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   815   0.0  

>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 622

 Score =  838 bits (2165), Expect = 0.0
 Identities = 431/557 (77%), Positives = 460/557 (82%), Gaps = 2/557 (0%)
 Frame = +2

Query: 299  MRTAWAD-ITNSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNR-PPSSDXXXXXX 472
            MRT+WAD + NS ++N  +G+  ++  G G  SR  RSSYVPPHLRNR P S        
Sbjct: 1    MRTSWADSVANSTSDNLVSGSSDNSGFGAGAPSRSGRSSYVPPHLRNRPPSSDPPAPSYT 60

Query: 473  XXXXXXNDRSXXXXXXXXXXXXXAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 652
                                     R  V                              V
Sbjct: 61   SQASAGYGGPPGGTRWGGGSRADFGRSGVTTGVTSGGRVGGSSGWNTRSGGWDRGRDREV 120

Query: 653  NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 832
            NPFGDDD         EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 121  NPFGDDDNAEPAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRR 180

Query: 833  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRPRGARTV 1012
            CKYVKPTPVQRHAIPISL+G+DLMACAQTGSGKTAAFCFPIISGIMTGQ AQRPRGARTV
Sbjct: 181  CKYVKPTPVQRHAIPISLSGKDLMACAQTGSGKTAAFCFPIISGIMTGQFAQRPRGARTV 240

Query: 1013 FPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPG 1192
            +PLALILSPTRELSCQIH+EA+KFSYQTGV+VVVAYGGAPINQQLR+LERGVDILVATPG
Sbjct: 241  YPLALILSPTRELSCQIHDEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 300

Query: 1193 RLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATF 1372
            RLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP GVRQTMLFSATF
Sbjct: 301  RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATF 360

Query: 1373 PKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTHG 1552
            PKEIQRLASDFL+SYIFLAVGRVGSSTDLIVQRVEFV+ESDKRSHLMDLLHAQR NG HG
Sbjct: 361  PKEIQRLASDFLSSYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHG 420

Query: 1553 KQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVATD 1732
            KQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQERE+ALRSFKSG TPILVATD
Sbjct: 421  KQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATD 480

Query: 1733 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAEL 1912
            VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFNENNS++AR LA+L
Sbjct: 481  VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADL 540

Query: 1913 MQESNQEVPEWLSRYAA 1963
            MQE+NQEVP WL+RYA+
Sbjct: 541  MQEANQEVPAWLTRYAS 557


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
            gi|147854540|emb|CAN78578.1| hypothetical protein
            VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  837 bits (2161), Expect = 0.0
 Identities = 435/558 (77%), Positives = 471/558 (84%), Gaps = 3/558 (0%)
 Frame = +2

Query: 299  MRTAWAD-ITNSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXXX 475
            MR++WAD + NSAAEN AAG  SSA+ GV   ++P R +Y+PPHLRN  PSS+       
Sbjct: 1    MRSSWADSVVNSAAENVAAG--SSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYS 58

Query: 476  XXXXXNDRSXXXXXXXXXXXXXAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVN 655
                 NDRS              PR D                               VN
Sbjct: 59   GPSSANDRSGYSGNRWG-----GPRND--SNQTGYSSGGRTGGWNNKSGGWDRGREREVN 111

Query: 656  PFGDD-DGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 832
            PFGDD D E V  +  EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNI+R
Sbjct: 112  PFGDDVDTEKVFSE-QENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKR 170

Query: 833  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1009
            CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ +QRP RGART
Sbjct: 171  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQASQRPPRGART 230

Query: 1010 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1189
            V+PLALILSPTRELSCQIH+EAKKFSYQTGV+VVVAYGGAPI+QQLRDLERGVDILVATP
Sbjct: 231  VYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPISQQLRDLERGVDILVATP 290

Query: 1190 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1369
            GRLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP+GVRQTMLFSAT
Sbjct: 291  GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPQGVRQTMLFSAT 350

Query: 1370 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1549
            FPKEIQ+LASDFL++Y+FLAVGRVGSSTDLIVQRVEFV+++DKRSHLMDLLHAQR NG H
Sbjct: 351  FPKEIQKLASDFLSNYVFLAVGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVH 410

Query: 1550 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 1729
            GKQ LTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQERE ALRSFKSG TPILVAT
Sbjct: 411  GKQYLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVAT 470

Query: 1730 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 1909
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFN+NNS++A++L+E
Sbjct: 471  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSE 530

Query: 1910 LMQESNQEVPEWLSRYAA 1963
            LMQE+NQEVP WLSRYAA
Sbjct: 531  LMQEANQEVPAWLSRYAA 548


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 619

 Score =  822 bits (2124), Expect = 0.0
 Identities = 430/558 (77%), Positives = 458/558 (82%), Gaps = 3/558 (0%)
 Frame = +2

Query: 299  MRTAWADIT-NSAAENTAAGAGSSA-NEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXX 472
            MRT+WAD+  NSAAEN  AG GSSA N G G+T  P R  YVPPHLRNR P+++      
Sbjct: 1    MRTSWADLAANSAAEN--AGPGSSADNVGTGSTLAPTRPVYVPPHLRNRQPAAESPAPAP 58

Query: 473  XXXXXXNDRSXXXXXXXXXXXXXAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 652
                  +                APR D                               V
Sbjct: 59   AYSGPSSGAGSSSGAGNSGSRYAAPRNDYRPGYGGGGGRTGGWGNKSGGWDRGRERE--V 116

Query: 653  NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 832
            NPF ++D         EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 117  NPFEEEDNAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRR 176

Query: 833  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1009
            CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ  QRP RG RT
Sbjct: 177  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRT 236

Query: 1010 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1189
            V+PLAL+LSPTRELS QIHEEA+KFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP
Sbjct: 237  VYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 296

Query: 1190 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1369
            GRLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP G RQTMLFSAT
Sbjct: 297  GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSAT 356

Query: 1370 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1549
            FPKEIQRLASDFL++YIFLAVGRVGSSTDLIVQRVE+V ESDKRSHLMDLLHAQR NG  
Sbjct: 357  FPKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQ 416

Query: 1550 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 1729
            GKQ+LTLVFVETKKGADSLEHWLC+NGFPATTIHGDR+QQERE ALRSFKSG TPILVAT
Sbjct: 417  GKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVAT 476

Query: 1730 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 1909
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK GLATAFFN+NNS++AR+L+E
Sbjct: 477  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSE 536

Query: 1910 LMQESNQEVPEWLSRYAA 1963
            LMQE+NQEVP WLSRYAA
Sbjct: 537  LMQEANQEVPAWLSRYAA 554


>ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Cucumis
            sativus]
          Length = 625

 Score =  815 bits (2104), Expect = 0.0
 Identities = 427/558 (76%), Positives = 457/558 (81%), Gaps = 3/558 (0%)
 Frame = +2

Query: 299  MRTAWADIT-NSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXXX 475
            MRT+WAD+  +SAAEN AAG  S+ N   G T+ P RS+YVPPHLRNR   +D       
Sbjct: 1    MRTSWADLAASSAAENVAAG--SANNCSAGTTTAPGRSAYVPPHLRNRTAPADLPAAANS 58

Query: 476  XXXXXNDRSXXXXXXXXXXXXXAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-V 652
                 NDRS              PR D                                V
Sbjct: 59   GPAVGNDRSGHAGSRWGG----GPRNDYNNRSGYSGGSRGGGWGGSRGGGWDRGRGDREV 114

Query: 653  NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 832
            NPFGD++         EN+GINFDAYEDIPVETSG+NVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 115  NPFGDEEDTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRR 174

Query: 833  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1009
            CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ   RP RGART
Sbjct: 175  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSMPRPARGART 234

Query: 1010 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1189
            V+PLALILSPTRELS QIHEEA+KFSYQTGVRVVVAYGGAPIN QLRDLERGVDILVATP
Sbjct: 235  VYPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINLQLRDLERGVDILVATP 294

Query: 1190 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1369
            GRLVDLLERA+VSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP GVRQTMLFSAT
Sbjct: 295  GRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSAT 354

Query: 1370 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1549
            FP+EIQRLASDFL  YIFLAVGRVGSSTDLI QRVEFV+E+DKRSHL+DLLHAQR NG  
Sbjct: 355  FPREIQRLASDFLDKYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQ 414

Query: 1550 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 1729
            GKQSLTLVFVETKKGAD+LEHWLC+NGFPATTIHGDRTQQERE ALRSF+SG TPILVAT
Sbjct: 415  GKQSLTLVFVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVAT 474

Query: 1730 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 1909
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFNENN+++ARSLA+
Sbjct: 475  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNASLARSLAD 534

Query: 1910 LMQESNQEVPEWLSRYAA 1963
            LM ESNQEVPEWL R+AA
Sbjct: 535  LMSESNQEVPEWLIRFAA 552


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 614

 Score =  815 bits (2104), Expect = 0.0
 Identities = 427/558 (76%), Positives = 457/558 (81%), Gaps = 3/558 (0%)
 Frame = +2

Query: 299  MRTAWADIT-NSAAENTAAGAGSSANE-GVGNTSRPARSSYVPPHLRNRPPSSDXXXXXX 472
            MRT+WAD+  NSAAEN  AG GSSAN  G G+   P R  YVPPHLRNR P+++      
Sbjct: 1    MRTSWADLAANSAAEN--AGPGSSANNVGTGSNLAPTRPVYVPPHLRNRQPAAESPAPAP 58

Query: 473  XXXXXXNDRSXXXXXXXXXXXXXAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 652
                  +                APR D                               V
Sbjct: 59   AYSGPSSGAGNSGSRYA------APRNDYRPGYGGGGGGRTGGWGNKSGGWDRGRERE-V 111

Query: 653  NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 832
            NPF ++D         EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 112  NPFEEEDNAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRR 171

Query: 833  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1009
            CKYV+PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ  QRP RG RT
Sbjct: 172  CKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRPPRGVRT 231

Query: 1010 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1189
            V+PLAL+LSPTRELS QIHEEA+KFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP
Sbjct: 232  VYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 291

Query: 1190 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1369
            GRLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP G RQTMLFSAT
Sbjct: 292  GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSAT 351

Query: 1370 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1549
            FPKEIQRLASDFL++YIFLAVGRVGSSTDLIVQRVE+V ESDKRSHLMDLLHAQR NG  
Sbjct: 352  FPKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQ 411

Query: 1550 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 1729
            GKQ+LTLVFVETKKGADSLEHWLC+NGFPATTIHGDR+QQERE ALRSFKSG TPILVAT
Sbjct: 412  GKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVAT 471

Query: 1730 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 1909
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK GLATAFFN+NNS++AR+L+E
Sbjct: 472  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSE 531

Query: 1910 LMQESNQEVPEWLSRYAA 1963
            LMQE+NQEVP WLSR+AA
Sbjct: 532  LMQEANQEVPAWLSRFAA 549


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