BLASTX nr result
ID: Coptis25_contig00006975
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006975 (1097 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus... 132 2e-28 ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|1... 131 3e-28 ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|2... 130 4e-28 gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK... 130 6e-28 emb|CBI20899.3| unnamed protein product [Vitis vinifera] 128 3e-27 >ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus communis] gi|223544399|gb|EEF45920.1| 60S ribosomal protein L37, putative [Ricinus communis] Length = 96 Score = 132 bits (331), Expect = 2e-28 Identities = 60/66 (90%), Positives = 65/66 (98%) Frame = +2 Query: 899 FHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTGTGRMQYLRHLPRRFKSNFREGTQAAP 1078 FHLQKSRCSACAYPASR+RKYNWSVKAIRRKTTGTGRM+YLRH+PRRFK+NFREGTQA P Sbjct: 27 FHLQKSRCSACAYPASRLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKTNFREGTQAPP 86 Query: 1079 RSKGAA 1096 R+KGAA Sbjct: 87 RNKGAA 92 >ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|118482197|gb|ABK93027.1| unknown [Populus trichocarpa] gi|222855546|gb|EEE93093.1| predicted protein [Populus trichocarpa] Length = 94 Score = 131 bits (329), Expect = 3e-28 Identities = 59/66 (89%), Positives = 65/66 (98%) Frame = +2 Query: 899 FHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTGTGRMQYLRHLPRRFKSNFREGTQAAP 1078 FHLQKSRCSACA+PA+R+RKYNWSVKAIRRKTTGTGRM+YLRHLPRRFK+NFREGTQA P Sbjct: 27 FHLQKSRCSACAFPAARVRKYNWSVKAIRRKTTGTGRMKYLRHLPRRFKTNFREGTQATP 86 Query: 1079 RSKGAA 1096 R+KGAA Sbjct: 87 RNKGAA 92 >ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|222866254|gb|EEF03385.1| predicted protein [Populus trichocarpa] Length = 112 Score = 130 bits (328), Expect = 4e-28 Identities = 68/108 (62%), Positives = 77/108 (71%), Gaps = 8/108 (7%) Frame = +2 Query: 797 SFLPKIRSCTPSVQ---GIGEDWFGEXXXXXXXXCY-----CFHLQKSRCSACAYPASRI 952 +FLP R + G G FG+ C FHLQKSRCSACA+PA+R+ Sbjct: 1 TFLPSDRVFAAEEEEEMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARV 60 Query: 953 RKYNWSVKAIRRKTTGTGRMQYLRHLPRRFKSNFREGTQAAPRSKGAA 1096 RKYNWS KAIRRKTTGTGRM+YLRHLPRRFK+NFREGTQAAPR+KGAA Sbjct: 61 RKYNWSEKAIRRKTTGTGRMKYLRHLPRRFKTNFREGTQAAPRNKGAA 108 >gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK94875.1| unknown [Populus trichocarpa] Length = 96 Score = 130 bits (327), Expect = 6e-28 Identities = 59/66 (89%), Positives = 65/66 (98%) Frame = +2 Query: 899 FHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTGTGRMQYLRHLPRRFKSNFREGTQAAP 1078 FHLQKSRCSACA+PA+R+RKYNWS KAIRRKTTGTGRM+YLRHLPRRFK+NFREGTQAAP Sbjct: 27 FHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTGTGRMKYLRHLPRRFKTNFREGTQAAP 86 Query: 1079 RSKGAA 1096 R+KGAA Sbjct: 87 RNKGAA 92 >emb|CBI20899.3| unnamed protein product [Vitis vinifera] Length = 156 Score = 128 bits (321), Expect = 3e-27 Identities = 69/109 (63%), Positives = 79/109 (72%), Gaps = 5/109 (4%) Frame = +2 Query: 785 LL*FSFLPKIRSCTPSVQGIGEDWFGEXXXXXXXXCY-----CFHLQKSRCSACAYPASR 949 LL FS ++ S TP + G G FG+ C FHLQKSRC+AC +P+SR Sbjct: 48 LLKFSSEARV-SATPQM-GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACGFPSSR 105 Query: 950 IRKYNWSVKAIRRKTTGTGRMQYLRHLPRRFKSNFREGTQAAPRSKGAA 1096 IRKYNWSVKAIRRKTTGTGRM+YLRH+P RFKSNFREGT+AAPR KGAA Sbjct: 106 IRKYNWSVKAIRRKTTGTGRMRYLRHVPCRFKSNFREGTEAAPRKKGAA 154