BLASTX nr result

ID: Coptis25_contig00006968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006968
         (1325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subuni...   295   2e-77
gb|AFK44376.1| unknown [Medicago truncatula]                          290   4e-76
ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinu...   288   2e-75
ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-74
ref|XP_004141108.1| PREDICTED: anaphase-promoting complex subuni...   284   4e-74

>ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subunit 10 [Vitis vinifera]
            gi|297735140|emb|CBI17502.3| unnamed protein product
            [Vitis vinifera]
          Length = 192

 Score =  295 bits (755), Expect = 2e-77
 Identities = 151/215 (70%), Positives = 165/215 (76%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1230 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 1054
            MATES +GEEEGK+IG GNQ L V E+LREMAK AAWSVSSCK GNGV  LRDDNLDT+W
Sbjct: 1    MATESSEGEEEGKMIG-GNQHLVVDEDLREMAKKAAWSVSSCKAGNGVLLLRDDNLDTYW 59

Query: 1053 QXXXXXXXXXXXXXXXXXXXXXXSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPS 874
            Q                      SDGAQPHLVNI            +YVDFKLDESYTPS
Sbjct: 60   Q----------------------SDGAQPHLVNIQFLKKVKLQLVVIYVDFKLDESYTPS 97

Query: 873  KISVRAGDGFHNLKEIKCVELVKPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRD 694
            KIS+RAGDGFHNLKEIK VELVKP GW+YISLSG DPRE FVNTFMLQIA++SNHLNGRD
Sbjct: 98   KISIRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRETFVNTFMLQIAILSNHLNGRD 157

Query: 693  THLRQIKIYGPRPNPVPCQPFQFTSKEFITYSILR 589
            TH+RQIK+YGP PNP+P QPFQFTS+EFITYS +R
Sbjct: 158  THVRQIKVYGPPPNPIPRQPFQFTSREFITYSSVR 192


>gb|AFK44376.1| unknown [Medicago truncatula]
          Length = 196

 Score =  290 bits (743), Expect = 4e-76
 Identities = 150/216 (69%), Positives = 163/216 (75%), Gaps = 1/216 (0%)
 Frame = -3

Query: 1233 EMATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTF 1057
            EMA ES +GEEEGKL G GNQ L V E+LRE+ K AAWSVSSCKTGNGV  LRDDNL+T+
Sbjct: 4    EMAAESSEGEEEGKLSG-GNQVLIVDEDLRELGKKAAWSVSSCKTGNGVSSLRDDNLETY 62

Query: 1056 WQXXXXXXXXXXXXXXXXXXXXXXSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTP 877
            WQ                      SDGAQPH VNI            LYVDFKLDESYTP
Sbjct: 63   WQ----------------------SDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTP 100

Query: 876  SKISVRAGDGFHNLKEIKCVELVKPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGR 697
            SKIS+RAGDGFHNLKEIK VELVKP GW+Y+SLSG DPRE FVNTFMLQIAV+SNHLNGR
Sbjct: 101  SKISIRAGDGFHNLKEIKAVELVKPTGWLYLSLSGLDPRETFVNTFMLQIAVLSNHLNGR 160

Query: 696  DTHLRQIKIYGPRPNPVPCQPFQFTSKEFITYSILR 589
            DTH+RQIK+YGPRPNP+P QPFQFTS EFITYS +R
Sbjct: 161  DTHVRQIKVYGPRPNPIPQQPFQFTSTEFITYSTIR 196


>ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinus communis]
            gi|223539247|gb|EEF40840.1| anaphase-promoting complex,
            putative [Ricinus communis]
          Length = 192

 Score =  288 bits (737), Expect = 2e-75
 Identities = 149/215 (69%), Positives = 163/215 (75%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1230 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 1054
            MATES +GEEEGK+ G GNQ L V ++LREM K AAWSVSSCK GNGV  LRDDNLD+FW
Sbjct: 1    MATESSEGEEEGKITG-GNQHLVVDDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDSFW 59

Query: 1053 QXXXXXXXXXXXXXXXXXXXXXXSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPS 874
            Q                      SDGAQPHLVNI            LYVDFKLDESYTPS
Sbjct: 60   Q----------------------SDGAQPHLVNIQFQKKVKLQLVLLYVDFKLDESYTPS 97

Query: 873  KISVRAGDGFHNLKEIKCVELVKPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRD 694
            KIS+RAGDGFHNLKEIK VELVKP GW+Y+SLSG DPRE FVNTFMLQIAV+SNHLNGRD
Sbjct: 98   KISIRAGDGFHNLKEIKTVELVKPTGWVYLSLSGNDPRETFVNTFMLQIAVLSNHLNGRD 157

Query: 693  THLRQIKIYGPRPNPVPCQPFQFTSKEFITYSILR 589
            TH+RQIK+YGPR NP+P QPFQFTS+EFITYS +R
Sbjct: 158  THVRQIKVYGPRLNPIPHQPFQFTSREFITYSSVR 192


>ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|222836880|gb|EEE75273.1|
            predicted protein [Populus trichocarpa]
          Length = 192

 Score =  286 bits (731), Expect = 1e-74
 Identities = 146/215 (67%), Positives = 162/215 (75%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1230 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 1054
            MATES +GEEEGK+ G GN+ L + ++LREM K AAWSVSSCK GNGV  LRDDNLDT+W
Sbjct: 1    MATESSEGEEEGKITG-GNKHLVIEDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDTYW 59

Query: 1053 QXXXXXXXXXXXXXXXXXXXXXXSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPS 874
            Q                      SDGAQPHLVNI            LYVDFKLDESYTPS
Sbjct: 60   Q----------------------SDGAQPHLVNIQFQKKVKLQLVVLYVDFKLDESYTPS 97

Query: 873  KISVRAGDGFHNLKEIKCVELVKPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRD 694
            KIS+RAGDGFHNLKEIK +ELVKP GW+Y+SLSG DPRE FVNTFMLQIAV+SNHLNGRD
Sbjct: 98   KISIRAGDGFHNLKEIKTMELVKPTGWVYLSLSGNDPRETFVNTFMLQIAVLSNHLNGRD 157

Query: 693  THLRQIKIYGPRPNPVPCQPFQFTSKEFITYSILR 589
            TH+RQIK+YGPRPNP P QPFQFTS+EFI YS +R
Sbjct: 158  THVRQIKVYGPRPNPFPHQPFQFTSREFIMYSSVR 192


>ref|XP_004141108.1| PREDICTED: anaphase-promoting complex subunit 10-like [Cucumis
            sativus] gi|449489479|ref|XP_004158324.1| PREDICTED:
            anaphase-promoting complex subunit 10-like [Cucumis
            sativus]
          Length = 192

 Score =  284 bits (726), Expect = 4e-74
 Identities = 146/215 (67%), Positives = 162/215 (75%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1230 MATES-DGEEEGKLIGNGNQSLTVAEELREMAKNAAWSVSSCKTGNGVQFLRDDNLDTFW 1054
            MATES +GEE+ KL G GNQ L V ++LREM K AAWSVSSCK GNGV  LRDDNL+T+W
Sbjct: 1    MATESSEGEEDVKLTG-GNQVLVVEDDLREMGKKAAWSVSSCKPGNGVSALRDDNLETYW 59

Query: 1053 QXXXXXXXXXXXXXXXXXXXXXXSDGAQPHLVNIXXXXXXXXXXXXLYVDFKLDESYTPS 874
            Q                      SDG QPHLVNI            LYVDFKLDESYTPS
Sbjct: 60   Q----------------------SDGVQPHLVNIQFQKKVKLQLVVLYVDFKLDESYTPS 97

Query: 873  KISVRAGDGFHNLKEIKCVELVKPVGWIYISLSGTDPREVFVNTFMLQIAVISNHLNGRD 694
            KIS+RAGDGFHNLKEIK VELVKP GW+Y+ LSG DP++ FVNTFMLQIAV+SNHLNGRD
Sbjct: 98   KISIRAGDGFHNLKEIKTVELVKPTGWVYLLLSGNDPKDTFVNTFMLQIAVLSNHLNGRD 157

Query: 693  THLRQIKIYGPRPNPVPCQPFQFTSKEFITYSILR 589
            TH+RQIKIYGPRPNP+P QPFQFTS+EFITYSI+R
Sbjct: 158  THVRQIKIYGPRPNPIPHQPFQFTSREFITYSIIR 192


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