BLASTX nr result

ID: Coptis25_contig00006954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006954
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39438.3| unnamed protein product [Vitis vinifera]              254   7e-66
ref|XP_002266620.1| PREDICTED: uncharacterized WD repeat-contain...   254   7e-66
emb|CAN70843.1| hypothetical protein VITISV_007636 [Vitis vinifera]   254   9e-66
ref|XP_002518228.1| conserved hypothetical protein [Ricinus comm...   248   4e-64
gb|AFK37406.1| unknown [Lotus japonicus]                              245   4e-63

>emb|CBI39438.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  254 bits (649), Expect = 7e-66
 Identities = 129/187 (68%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
 Frame = +3

Query: 6   DDYESVTK-TDTSAAQARRGRDIQGIPWERLNITRENYRKTRLEHYKNYENVSSSGELID 182
           D+Y  +TK TDTS+AQAR G+DIQGIPW RLNITRENYR TRLE YKNYENV SSG+ +D
Sbjct: 125 DEYNMLTKVTDTSSAQARSGKDIQGIPWNRLNITRENYRVTRLEQYKNYENVPSSGDAVD 184

Query: 183 KEFKQMEKGSNYFEFRHNTRLVKPTVLHFQLRNXXXXXXXXXXXXXXXXXXXLHFQLRNL 362
           KE KQMEKG NYFEF HNTRLVKPT+LH                          FQLRNL
Sbjct: 185 KECKQMEKGGNYFEFFHNTRLVKPTILH--------------------------FQLRNL 218

Query: 363 VWASSKHDVYLMSHFSVVHWSSLSRNLSEVLNFQGHVAPTEKHSGSLLEGFSQTQISTLA 542
           VWA+SKHDVYLMS++SV+HWSS+S NLSE+LNF GHVAP+EKH GS+LEGF QTQISTLA
Sbjct: 219 VWATSKHDVYLMSNYSVMHWSSISSNLSELLNFSGHVAPSEKHPGSILEGFMQTQISTLA 278

Query: 543 VKDNLLV 563
           VKDN LV
Sbjct: 279 VKDNFLV 285


>ref|XP_002266620.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera]
          Length = 443

 Score =  254 bits (649), Expect = 7e-66
 Identities = 129/187 (68%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
 Frame = +3

Query: 6   DDYESVTK-TDTSAAQARRGRDIQGIPWERLNITRENYRKTRLEHYKNYENVSSSGELID 182
           D+Y  +TK TDTS+AQAR G+DIQGIPW RLNITRENYR TRLE YKNYENV SSG+ +D
Sbjct: 40  DEYNMLTKVTDTSSAQARSGKDIQGIPWNRLNITRENYRVTRLEQYKNYENVPSSGDAVD 99

Query: 183 KEFKQMEKGSNYFEFRHNTRLVKPTVLHFQLRNXXXXXXXXXXXXXXXXXXXLHFQLRNL 362
           KE KQMEKG NYFEF HNTRLVKPT+LH                          FQLRNL
Sbjct: 100 KECKQMEKGGNYFEFFHNTRLVKPTILH--------------------------FQLRNL 133

Query: 363 VWASSKHDVYLMSHFSVVHWSSLSRNLSEVLNFQGHVAPTEKHSGSLLEGFSQTQISTLA 542
           VWA+SKHDVYLMS++SV+HWSS+S NLSE+LNF GHVAP+EKH GS+LEGF QTQISTLA
Sbjct: 134 VWATSKHDVYLMSNYSVMHWSSISSNLSELLNFSGHVAPSEKHPGSILEGFMQTQISTLA 193

Query: 543 VKDNLLV 563
           VKDN LV
Sbjct: 194 VKDNFLV 200


>emb|CAN70843.1| hypothetical protein VITISV_007636 [Vitis vinifera]
          Length = 395

 Score =  254 bits (648), Expect = 9e-66
 Identities = 132/199 (66%), Positives = 148/199 (74%), Gaps = 13/199 (6%)
 Frame = +3

Query: 6   DDYESVTK-TDTSAAQARRGRDIQGIPWERLNITRENYRKTRLEHYKNYENVSSSGELID 182
           D+Y  +TK TDTS+AQAR G+DIQGIPW RLNITRENYR TRLE YKNYENV SSG+ +D
Sbjct: 29  DEYNMLTKVTDTSSAQARSGKDIQGIPWNRLNITRENYRVTRLEQYKNYENVPSSGDAVD 88

Query: 183 KEFKQMEKGSNYFEFRHNTRLVKPTVLHFQLRNXXXXXXXXXXXXXXXXXXXLHFQ---- 350
           KE KQMEKG NYFEF HNTRLVKPT+LHFQ  N                   +H Q    
Sbjct: 89  KECKQMEKGGNYFEFFHNTRLVKPTILHFQYYN-SVNDIAEVTLDGHITVHKIHQQVLLV 147

Query: 351 --------LRNLVWASSKHDVYLMSHFSVVHWSSLSRNLSEVLNFQGHVAPTEKHSGSLL 506
                   LRNLVWA+SKHDVYLMS++SV+HWSS+S NLSE+LNF GHVAP+EKH GS+L
Sbjct: 148 DMDSRSGLLRNLVWATSKHDVYLMSNYSVMHWSSISSNLSELLNFSGHVAPSEKHPGSIL 207

Query: 507 EGFSQTQISTLAVKDNLLV 563
           EGF QTQISTLAVKDN LV
Sbjct: 208 EGFMQTQISTLAVKDNFLV 226


>ref|XP_002518228.1| conserved hypothetical protein [Ricinus communis]
           gi|223542633|gb|EEF44171.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score =  248 bits (634), Expect = 4e-64
 Identities = 125/187 (66%), Positives = 146/187 (78%), Gaps = 1/187 (0%)
 Frame = +3

Query: 6   DDYESVTK-TDTSAAQARRGRDIQGIPWERLNITRENYRKTRLEHYKNYENVSSSGELID 182
           D+YE +TK TDTS+AQAR+G+DIQGIPWERLNI+R+ YR TRLE YKNYEN+  SG+ +D
Sbjct: 52  DEYEMLTKVTDTSSAQARKGKDIQGIPWERLNISRDKYRLTRLEQYKNYENIPLSGQAVD 111

Query: 183 KEFKQMEKGSNYFEFRHNTRLVKPTVLHFQLRNXXXXXXXXXXXXXXXXXXXLHFQLRNL 362
           KE KQMEKG NY+EF  NTRLVKPT+LH                          FQLRNL
Sbjct: 112 KECKQMEKGGNYYEFFLNTRLVKPTILH--------------------------FQLRNL 145

Query: 363 VWASSKHDVYLMSHFSVVHWSSLSRNLSEVLNFQGHVAPTEKHSGSLLEGFSQTQISTLA 542
           VWA+SKHDVYLMS++SV+HWSSLS NLSEV+NF GH+APTEKH+GSLLEGF+QTQISTLA
Sbjct: 146 VWATSKHDVYLMSNYSVMHWSSLSCNLSEVINFAGHIAPTEKHAGSLLEGFTQTQISTLA 205

Query: 543 VKDNLLV 563
           V+DN LV
Sbjct: 206 VRDNFLV 212


>gb|AFK37406.1| unknown [Lotus japonicus]
          Length = 277

 Score =  245 bits (625), Expect = 4e-63
 Identities = 122/187 (65%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
 Frame = +3

Query: 6   DDYESVTK-TDTSAAQARRGRDIQGIPWERLNITRENYRKTRLEHYKNYENVSSSGELID 182
           D+YE +TK TDTSAAQAR+G+DIQGIPWE LNITR +YR TRLE Y+N+EN+ +SGE +D
Sbjct: 36  DEYEMLTKVTDTSAAQARKGKDIQGIPWESLNITRGSYRLTRLEQYRNFENILTSGEAVD 95

Query: 183 KEFKQMEKGSNYFEFRHNTRLVKPTVLHFQLRNXXXXXXXXXXXXXXXXXXXLHFQLRNL 362
           KE KQMEKG  YF+F +NTR+VKPT+LH                          FQLRNL
Sbjct: 96  KELKQMEKGGKYFDFSYNTRMVKPTILH--------------------------FQLRNL 129

Query: 363 VWASSKHDVYLMSHFSVVHWSSLSRNLSEVLNFQGHVAPTEKHSGSLLEGFSQTQISTLA 542
           VWA+SKHDVYL+S++SV+HWSSLS NLSE++NF GHVAPTE+H+GS LEGFSQTQISTLA
Sbjct: 130 VWATSKHDVYLISNYSVMHWSSLSGNLSEIINFAGHVAPTERHAGSQLEGFSQTQISTLA 189

Query: 543 VKDNLLV 563
           VKDN LV
Sbjct: 190 VKDNFLV 196


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