BLASTX nr result

ID: Coptis25_contig00006948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006948
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282730.1| PREDICTED: uncharacterized protein LOC100246...   325   e-100
gb|ABK95089.1| unknown [Populus trichocarpa]                          318   2e-98
ref|XP_003537975.1| PREDICTED: uncharacterized protein LOC100801...   321   3e-98
ref|XP_003539562.1| PREDICTED: uncharacterized protein LOC100790...   317   5e-97
ref|XP_002520516.1| conserved hypothetical protein [Ricinus comm...   313   9e-97

>ref|XP_002282730.1| PREDICTED: uncharacterized protein LOC100246732 [Vitis vinifera]
          Length = 516

 Score =  325 bits (833), Expect(2) = e-100
 Identities = 189/299 (63%), Positives = 224/299 (74%), Gaps = 11/299 (3%)
 Frame = -3

Query: 998 MAHSLTSNSFLFITTPHSKPSHKNQKLRVSAQGSRPSPSASFGLGKK------QGLENVN 837
           MA +LTSNSFL  T PH + + KN  LRV A+  R  P ++F LGK+      +  EN +
Sbjct: 1   MAPTLTSNSFLLTTPPHPRLTLKNPSLRVYAK--RAGPLSAFRLGKQSDGPSEESQENGS 58

Query: 836 G---VFQDLGGKISDVKSLIPV--SKSSPLGNFRRKDGGTVFVAGATGQAGIRIAQTLLR 672
                F    GK+SDV SLIPV    SS L   RRKD GTVFVAGATGQAGIRIAQ LLR
Sbjct: 59  ANSAPFSFNFGKVSDVSSLIPVMTKPSSGLSFGRRKDPGTVFVAGATGQAGIRIAQALLR 118

Query: 671 QGFTVRAGVPDXXXXXXXXXXXSKYKIISPDESKRLFAVESTYEKAEAIAKAISNASKVV 492
           +GF+VRAGV D           +KYKIIS +ESKRL AVES+++ AE+IAKAI NASKVV
Sbjct: 119 EGFSVRAGVSDLGAAQELARLGAKYKIISNEESKRLNAVESSFQDAESIAKAIGNASKVV 178

Query: 491 VTIGPTENGPSSEVTTADALQVIQASQLAGVGHVAIIYDSKSNSSPSTYSVLGGISSFFS 312
           VTIGP ENGP++EVT  DALQVIQA+ LAGVGHVAIIYD +S    STY+V+ GIS+FF+
Sbjct: 179 VTIGPGENGPTAEVTPLDALQVIQAADLAGVGHVAIIYD-ESPFVSSTYNVIDGISTFFN 237

Query: 311 NMFAKSQPLTITEFLEKVVETDLRYTLIKTNLTEDFSPESSYNVVVSAEGTYGVNDFKV 135
           N+F++SQPLT+TEFL+KVVETD+ YTLI+TNLTEDFSPESSYNVVVSAEG+   ND+KV
Sbjct: 238 NLFSRSQPLTVTEFLQKVVETDVSYTLIRTNLTEDFSPESSYNVVVSAEGSVSSNDYKV 296



 Score = 66.2 bits (160), Expect(2) = e-100
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -1

Query: 127 VSKSQIASLVADVFSNTAVAENKVVKVSTDPAAPSKPVDQLF 2
           V+ SQIASLVA+VFSNTAVAENKVVKV TDP APSKP  +LF
Sbjct: 296 VATSQIASLVANVFSNTAVAENKVVKVFTDPGAPSKPAVELF 337


>gb|ABK95089.1| unknown [Populus trichocarpa]
          Length = 513

 Score =  318 bits (816), Expect(2) = 2e-98
 Identities = 181/296 (61%), Positives = 218/296 (73%), Gaps = 8/296 (2%)
 Frame = -3

Query: 998 MAHSLTSNSFLFITTPHSKPSHKNQKLRVSAQGSRPSPSASFGLGKKQGLENV----NGV 831
           MA +LTSNSFL  TTPHS+ S +N +LRV A+ + P  +  FG  K    +      +  
Sbjct: 1   MAPALTSNSFLLNTTPHSRLSLENPRLRVFAKKAGPFSTFQFGKPKDDESQTDGSGNSSP 60

Query: 830 FQDLGGKISDVKSLIPV----SKSSPLGNFRRKDGGTVFVAGATGQAGIRIAQTLLRQGF 663
           F    GK+ D+KSL+PV    S     GN RRKD GTVFVAGATGQAGIRIAQTLLR+GF
Sbjct: 61  FNFNFGKVPDMKSLVPVVSKPSSGLSFGNIRRKDPGTVFVAGATGQAGIRIAQTLLREGF 120

Query: 662 TVRAGVPDXXXXXXXXXXXSKYKIISPDESKRLFAVESTYEKAEAIAKAISNASKVVVTI 483
           +VRAGVP            ++YKIIS +ESKRL AVEST++  E+IAKAI NASK VVTI
Sbjct: 121 SVRAGVPQLGDAQELALLAAQYKIISNEESKRLNAVESTFQDTESIAKAIGNASKAVVTI 180

Query: 482 GPTENGPSSEVTTADALQVIQASQLAGVGHVAIIYDSKSNSSPSTYSVLGGISSFFSNMF 303
           GPTENGP+SEV+T DALQVI+A+QLAGVGHVAIIYD    SS ST +VL G  +FF+N+F
Sbjct: 181 GPTENGPTSEVSTLDALQVIEAAQLAGVGHVAIIYDGNPASS-STNNVLDGFKTFFNNLF 239

Query: 302 AKSQPLTITEFLEKVVETDLRYTLIKTNLTEDFSPESSYNVVVSAEGTYGVNDFKV 135
           ++SQ L++ EFL+KV+ETD+ YT IKT+LTEDFSPESSYNVVVSAEG+ G  DFKV
Sbjct: 240 SQSQ-LSVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEGSTGTGDFKV 294



 Score = 68.2 bits (165), Expect(2) = 2e-98
 Identities = 33/42 (78%), Positives = 41/42 (97%)
 Frame = -1

Query: 127 VSKSQIASLVADVFSNTAVAENKVVKVSTDPAAPSKPVDQLF 2
           V+KSQIAS+VA+VFSNT+VAENKVV+V T+P+APSKPVD+LF
Sbjct: 294 VAKSQIASVVANVFSNTSVAENKVVEVFTNPSAPSKPVDELF 335


>ref|XP_003537975.1| PREDICTED: uncharacterized protein LOC100801140 [Glycine max]
          Length = 516

 Score =  321 bits (822), Expect(2) = 3e-98
 Identities = 181/303 (59%), Positives = 227/303 (74%), Gaps = 15/303 (4%)
 Frame = -3

Query: 998 MAHSLTSNSFLFITTPHSKPSHKNQKLRVSAQGSRPSPSASFGLGK----------KQGL 849
           MA +LTSNS    T+PHS+ S +N +LRV A+ S   PS  FGLGK          K   
Sbjct: 1   MAPTLTSNSSFLSTSPHSRVSLRNPRLRVFAKKSGSFPS--FGLGKPKDDSSSAEEKDNS 58

Query: 848 ENVNGVFQDLGGKISDVKSLIPV--SKSSP---LGNFRRKDGGTVFVAGATGQAGIRIAQ 684
            N N    D G KI DV SLIPV  + S+P    GN RRKD  TVFVAGATGQAGIRIAQ
Sbjct: 59  SNSNPFRLDFG-KIPDVTSLIPVPSNTSAPGFSFGNTRRKDPSTVFVAGATGQAGIRIAQ 117

Query: 683 TLLRQGFTVRAGVPDXXXXXXXXXXXSKYKIISPDESKRLFAVESTYEKAEAIAKAISNA 504
           TLLR+GF+VRAGVP+           ++YKIIS +++KRL AV+S+++ A+ IAKAI NA
Sbjct: 118 TLLREGFSVRAGVPELGSAQELARLATQYKIISNEQAKRLNAVQSSFDNADTIAKAIGNA 177

Query: 503 SKVVVTIGPTENGPSSEVTTADALQVIQASQLAGVGHVAIIYDSKSNSSPSTYSVLGGIS 324
            KVVVTIGPTENGP++EV+++DALQV+QA+QLAGVGHVAI+YD +S++  STY+VL G+S
Sbjct: 178 GKVVVTIGPTENGPTAEVSSSDALQVVQAAQLAGVGHVAIVYD-ESSTGASTYNVLDGLS 236

Query: 323 SFFSNMFAKSQPLTITEFLEKVVETDLRYTLIKTNLTEDFSPESSYNVVVSAEGTYGVND 144
           SFF+N+F++SQPLTI EFL+KV+ETD++YT IKT+LT+DFSPESSYNVVV  EG+   ND
Sbjct: 237 SFFNNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFSPESSYNVVVLGEGSASAND 296

Query: 143 FKV 135
           +KV
Sbjct: 297 YKV 299



 Score = 65.5 bits (158), Expect(2) = 3e-98
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = -1

Query: 127 VSKSQIASLVADVFSNTAVAENKVVKVSTDPAAPSKPVDQLF 2
           V+KS+IASLVADVFSNT VAENKVVKV +DP+AP K VD+LF
Sbjct: 299 VAKSKIASLVADVFSNTEVAENKVVKVHSDPSAPLKRVDELF 340


>ref|XP_003539562.1| PREDICTED: uncharacterized protein LOC100790239 [Glycine max]
          Length = 513

 Score =  317 bits (813), Expect(2) = 5e-97
 Identities = 179/302 (59%), Positives = 226/302 (74%), Gaps = 14/302 (4%)
 Frame = -3

Query: 998 MAHSLTSNSFLFITTPHSKPSHKNQKLRVSAQGSRPSPSASFGLGK-----------KQG 852
           MA +LTSNS    +TPHS+ + +N +LRV A+ S   PS  FGLGK           K G
Sbjct: 1   MAPTLTSNSSFITSTPHSRVTLRNPRLRVFAKKSGSFPS--FGLGKPKDDSSSSTEEKDG 58

Query: 851 LENVNGVFQDLGGKISDVKSLIPVSKSSP---LGNFRRKDGGTVFVAGATGQAGIRIAQT 681
             N N    D G KIS +   +P + S+P    GN RRKD  TVFVAGATGQAGIRIAQT
Sbjct: 59  SSNSNPFRLDFG-KISLIP--VPSNTSAPGFSFGNPRRKDPSTVFVAGATGQAGIRIAQT 115

Query: 680 LLRQGFTVRAGVPDXXXXXXXXXXXSKYKIISPDESKRLFAVESTYEKAEAIAKAISNAS 501
           LLR+GF+VRAGVP+           ++YKIIS +++KRL AV+S+++ A+ IAKAI NAS
Sbjct: 116 LLREGFSVRAGVPELASAQELARLAAQYKIISNEQAKRLNAVQSSFDNADTIAKAIGNAS 175

Query: 500 KVVVTIGPTENGPSSEVTTADALQVIQASQLAGVGHVAIIYDSKSNSSPSTYSVLGGISS 321
           KVVVTIGPTENGP++EV+ +DALQV+QA+QLAGVGHVA+IYD +S++  STY+VL G+SS
Sbjct: 176 KVVVTIGPTENGPTTEVSASDALQVVQAAQLAGVGHVAVIYD-ESSAGASTYNVLDGLSS 234

Query: 320 FFSNMFAKSQPLTITEFLEKVVETDLRYTLIKTNLTEDFSPESSYNVVVSAEGTYGVNDF 141
           FFSN+F++SQPLTI EFL+KV+ETD++YT IKT+LT+DFSPESSYNVVV  EG+ G ND+
Sbjct: 235 FFSNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFSPESSYNVVVLGEGSDGANDY 294

Query: 140 KV 135
           KV
Sbjct: 295 KV 296



 Score = 64.7 bits (156), Expect(2) = 5e-97
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = -1

Query: 127 VSKSQIASLVADVFSNTAVAENKVVKVSTDPAAPSKPVDQLF 2
           V+KS+IASLVADVFSNT VAENKVVKV +DP AP K VD+LF
Sbjct: 296 VAKSKIASLVADVFSNTEVAENKVVKVYSDPGAPLKRVDELF 337


>ref|XP_002520516.1| conserved hypothetical protein [Ricinus communis]
           gi|223540358|gb|EEF41929.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 513

 Score =  313 bits (803), Expect(2) = 9e-97
 Identities = 181/297 (60%), Positives = 225/297 (75%), Gaps = 9/297 (3%)
 Frame = -3

Query: 998 MAHSLTSNSFLFITTPHSKPSHKNQKLRVSAQGSRPSPSASFGLGKKQ--------GLEN 843
           MA +LTSNSF   TTPHS+ S K Q+L V A+  R  P + F LGK +        G   
Sbjct: 1   MAPTLTSNSFRLATTPHSRQSLKIQRLGVFAK--RAGPFSPFQLGKSKDDSESSEAGASG 58

Query: 842 VNGVFQDLGGKISDVKSLIP-VSKSSPLGNFRRKDGGTVFVAGATGQAGIRIAQTLLRQG 666
            +  F    GK+ D+KSLIP VSK +   +FRRKD  TVFVAGATG AGIRIAQTLLR+G
Sbjct: 59  NSSPFSFNFGKVPDMKSLIPIVSKPASGVSFRRKDPSTVFVAGATGLAGIRIAQTLLREG 118

Query: 665 FTVRAGVPDXXXXXXXXXXXSKYKIISPDESKRLFAVESTYEKAEAIAKAISNASKVVVT 486
           F+VRAGV +           ++YKIIS +ES+RL AV+ST++ AE+IAKAI NASKVVVT
Sbjct: 119 FSVRAGVSELEAAQDLARFAAEYKIISKEESRRLNAVQSTFKDAESIAKAIGNASKVVVT 178

Query: 485 IGPTENGPSSEVTTADALQVIQASQLAGVGHVAIIYDSKSNSSPSTYSVLGGISSFFSNM 306
           IGP ENGP+SEV++ADALQVIQA+QLAGVGHVAIIYDS + +S STY+VL G++SFF+N+
Sbjct: 179 IGPAENGPTSEVSSADALQVIQAAQLAGVGHVAIIYDS-NIASGSTYNVLDGLTSFFNNL 237

Query: 305 FAKSQPLTITEFLEKVVETDLRYTLIKTNLTEDFSPESSYNVVVSAEGTYGVNDFKV 135
           F++ QPL+I EFL+KV+ETD+ YT IKT+LTEDFSPE SYN+VVSAEG+ G +D+KV
Sbjct: 238 FSQYQPLSIPEFLQKVIETDVSYTFIKTSLTEDFSPECSYNLVVSAEGSTG-SDYKV 293



 Score = 67.8 bits (164), Expect(2) = 9e-97
 Identities = 33/42 (78%), Positives = 40/42 (95%)
 Frame = -1

Query: 127 VSKSQIASLVADVFSNTAVAENKVVKVSTDPAAPSKPVDQLF 2
           V+KSQIAS+VA+VFSNTAVAENKVV++ TDP+APSK VD+LF
Sbjct: 293 VAKSQIASVVANVFSNTAVAENKVVEIFTDPSAPSKSVDELF 334


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