BLASTX nr result

ID: Coptis25_contig00006945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006945
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|...   283   6e-74
ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|2...   262   8e-68
ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi...   249   9e-64
ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]    244   2e-62
ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE...   244   2e-62

>ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera]
           gi|302141888|emb|CBI19091.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score =  283 bits (723), Expect = 6e-74
 Identities = 152/253 (60%), Positives = 185/253 (73%), Gaps = 18/253 (7%)
 Frame = -3

Query: 940 RPCFKPFVRTQDSEP------------------EVDEKKLKGSDLKNLIDAYKEAILNGD 815
           R  FKPF+  QDS P                  E D+K L  S LK+LI AYK+A+L+GD
Sbjct: 43  RRSFKPFLALQDSTPYTNNEEEGSRYDVKTSKSEADQKPL--SVLKSLIKAYKDAVLDGD 100

Query: 814 EKTVLDKEAFFSKLEDEKNALAEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRL 635
           EK V + EA    +E EK  LA+KV AL  +I S KE +IR QADF+NFRK+ EK++L +
Sbjct: 101 EKAVSEIEAMIDTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTV 160

Query: 634 TFNTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSAVQ 455
             + Q +V+ESLLP++DNFE+AKQ I PETEK +KI+TSYQ IYKQFVEI+RS  V+AV 
Sbjct: 161 RTDAQGEVVESLLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVA 220

Query: 454 TIGKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLI 275
           T+GKPFDP LHEAIAREESQ+FKEG+IIQE RRGFLLGDR+LRPA+VKVSTG G KKT  
Sbjct: 221 TVGKPFDPALHEAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKTSA 280

Query: 274 PTEESEGQPATAA 236
             ++S GQPATAA
Sbjct: 281 VADKSTGQPATAA 293


>ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|222842747|gb|EEE80294.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  262 bits (670), Expect = 8e-68
 Identities = 134/252 (53%), Positives = 185/252 (73%), Gaps = 9/252 (3%)
 Frame = -3

Query: 964 PFLYSNSNRPCFKPFVRTQDSEP---------EVDEKKLKGSDLKNLIDAYKEAILNGDE 812
           P   +N  R   K ++  +DS P         E+ E + +G  LKNL+  Y++AI  GDE
Sbjct: 19  PIPINNIKRRSLKTYLAPEDSAPTTNGKEENNEIQEGQKRGPSLKNLMKIYRQAIFYGDE 78

Query: 811 KTVLDKEAFFSKLEDEKNALAEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLT 632
           KT+LD EA  + +E E +   +KV +L  +I S KE +IR QADF+NFRK+ +K+++ + 
Sbjct: 79  KTILDIEAKAATIEKENHEFLQKVSSLSAEITSGKEKYIRLQADFDNFRKRSDKERVNIR 138

Query: 631 FNTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSAVQT 452
            + Q +VIESLLP+VD+FE+AKQ I PETEK +KI++SYQ IYKQ V+I+R+L+V+AV T
Sbjct: 139 SDAQGEVIESLLPMVDSFERAKQQIQPETEKEKKIDSSYQGIYKQLVDIMRNLQVAAVPT 198

Query: 451 IGKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIP 272
           +GKPFDP LHEAIAREESQ++KEG+IIQE RRGFL+G+R++RPA+VKVS+G G+KK+ + 
Sbjct: 199 VGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLIGNRLIRPAMVKVSSGPGNKKSSVG 258

Query: 271 TEESEGQPATAA 236
           TE    QPATAA
Sbjct: 259 TETRAEQPATAA 270


>ref|XP_002513845.1| Protein grpE, putative [Ricinus communis]
           gi|223546931|gb|EEF48428.1| Protein grpE, putative
           [Ricinus communis]
          Length = 315

 Score =  249 bits (635), Expect = 9e-64
 Identities = 142/259 (54%), Positives = 179/259 (69%), Gaps = 16/259 (6%)
 Frame = -3

Query: 964 PFLYSNSNRPCFKPFVRTQDSEPEV---------DEKKL-KGSDLKNL------IDAYKE 833
           P   ++  R  FK ++ T DS P+          D+K L K +D K+L      I+ YKE
Sbjct: 56  PVTNNHIERRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHLPSLTKLINIYKE 115

Query: 832 AILNGDEKTVLDKEAFFSKLEDEKNALAEKVGALLPDIASQKENFIRTQADFENFRKQFE 653
           AIL GDE+TV D EA    +E+    L +KV  L  +I S KE +IR QADF+NFRK+ E
Sbjct: 116 AILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRKRSE 175

Query: 652 KDQLRLTFNTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSL 473
           K++  +  + Q +VIESLLP+VD+FE+AKQ I PETE  +KI+TSYQ IYKQFVEI+RSL
Sbjct: 176 KERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIMRSL 235

Query: 472 RVSAVQTIGKPFDPLLHEAIAREESQQFKEGVIIQETRRGFLLGDRVLRPAVVKVSTGSG 293
           +V+ V T+GKPFDP LHEAIAREESQ++KEG+IIQE RRGFLLG R+LRPA+VKVS G G
Sbjct: 236 QVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSAGPG 295

Query: 292 HKKTLIPTEESEGQPATAA 236
            KK  +  E    QPATAA
Sbjct: 296 RKKAPVGAE----QPATAA 310


>ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  244 bits (624), Expect = 2e-62
 Identities = 127/221 (57%), Positives = 166/221 (75%)
 Frame = -3

Query: 895 EVDEKKLKGSDLKNLIDAYKEAILNGDEKTVLDKEAFFSKLEDEKNALAEKVGALLPDIA 716
           E D  K  GS L+ LI+ Y+EA L+GD+KTV + EA    +  EK+ L+ K+  +  ++ 
Sbjct: 94  EKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIKIIGREKDELSRKLMNISTEMT 153

Query: 715 SQKENFIRTQADFENFRKQFEKDQLRLTFNTQKDVIESLLPVVDNFEKAKQHIIPETEKG 536
           S KE +IR QADF+NFRK+ EK+Q  +  N QK+V+ESLLP++D+F+KA+Q I+P+T+K 
Sbjct: 154 SGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKE 213

Query: 535 QKINTSYQSIYKQFVEILRSLRVSAVQTIGKPFDPLLHEAIAREESQQFKEGVIIQETRR 356
           +KI+ SYQ IYKQFVE LRS RVSAV T+G+PFDP LHEA+AREESQ+ KEG+IIQE RR
Sbjct: 214 KKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRR 273

Query: 355 GFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATAAV 233
           GFLLG+R+LRPA VKVS G G K +   T + E QPA AAV
Sbjct: 274 GFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAAAV 312


>ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  244 bits (623), Expect = 2e-62
 Identities = 127/221 (57%), Positives = 166/221 (75%)
 Frame = -3

Query: 895 EVDEKKLKGSDLKNLIDAYKEAILNGDEKTVLDKEAFFSKLEDEKNALAEKVGALLPDIA 716
           E D  K  GS L+ LI+ Y+EA L+GD+KTV + EA    +  EK+ L+ K+  +  ++ 
Sbjct: 94  EKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARXKIIGREKDELSRKLMNISTEMT 153

Query: 715 SQKENFIRTQADFENFRKQFEKDQLRLTFNTQKDVIESLLPVVDNFEKAKQHIIPETEKG 536
           S KE +IR QADF+NFRK+ EK+Q  +  N QK+V+ESLLP++D+F+KA+Q I+P+T+K 
Sbjct: 154 SGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESLLPMIDHFDKARQQIVPQTDKE 213

Query: 535 QKINTSYQSIYKQFVEILRSLRVSAVQTIGKPFDPLLHEAIAREESQQFKEGVIIQETRR 356
           +KI+ SYQ IYKQFVE LRS RVSAV T+G+PFDP LHEA+AREESQ+ KEG+IIQE RR
Sbjct: 214 KKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHEAVAREESQEIKEGIIIQELRR 273

Query: 355 GFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATAAV 233
           GFLLG+R+LRPA VKVS G G K +   T + E QPA AAV
Sbjct: 274 GFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAAAV 312


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