BLASTX nr result

ID: Coptis25_contig00006932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006932
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|2...   489   e-172
ref|XP_002299870.1| predicted protein [Populus trichocarpa] gi|2...   493   e-172
emb|CBI16124.3| unnamed protein product [Vitis vinifera]              486   e-168
ref|NP_001234409.1| protein kinase 1b [Solanum lycopersicum] gi|...   476   e-167
ref|XP_002266032.1| PREDICTED: protein kinase APK1A, chloroplast...   469   e-166

>ref|XP_002314178.1| predicted protein [Populus trichocarpa] gi|222850586|gb|EEE88133.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  489 bits (1260), Expect(2) = e-172
 Identities = 243/299 (81%), Positives = 266/299 (88%), Gaps = 1/299 (0%)
 Frame = +3

Query: 297  LNQEGFQGHKEWLAEVNYLGQFYHPNLVRLVGYCLEDEHRLLVYEFMPRGSLENHLFRRG 476
            LNQ+GFQGHKEWLAEVNYLGQ Y+P+LV+L+GYCLEDEHRLLVYEFMPRGSLENHLFRRG
Sbjct: 100  LNQDGFQGHKEWLAEVNYLGQLYNPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 159

Query: 477  SYFQPLSWNLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKD 656
            SYFQPLSWNLRMKV+LGAAKGLAFLHSAETKVIYRDFKTSNILLDS YNAKLSDFGLAKD
Sbjct: 160  SYFQPLSWNLRMKVSLGAAKGLAFLHSAETKVIYRDFKTSNILLDSKYNAKLSDFGLAKD 219

Query: 657  GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTSKSDVYSFGVVLLEMLSGRRAVDKNRPSG 836
            GPTGDKSHVSTRVMGTYGYAAPEYLATGHLT+KSDVYSFGVVLLEMLSGRRAVDKNRPSG
Sbjct: 220  GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSG 279

Query: 837  EHSLVEWAKPYLSHKRKIFRVLDSRLEGQYSLGAAQKAAILALQCLSMEARFRPNMDEVV 1016
            EH+LVEWAKPYL++KRKIFR+LDSRLEGQYS+  A K + LAL+CLS+E +FRP MDEVV
Sbjct: 280  EHNLVEWAKPYLANKRKIFRILDSRLEGQYSMDVAYKVSTLALRCLSIETKFRPTMDEVV 339

Query: 1017 KALEELKDSKDTKTAQNEQKPNNQTHSSNGMKSRRRSADDGR-NVKAASYPRPTASPLY 1190
             ALE+L+DSK+T TA          H  N  + RRRSA+D       A+YPRP+ASPLY
Sbjct: 340  TALEQLQDSKETGTANG--------HVGNKPRIRRRSANDATGGGSIAAYPRPSASPLY 390



 Score =  144 bits (364), Expect(2) = e-172
 Identities = 70/82 (85%), Positives = 76/82 (92%)
 Frame = +1

Query: 1   LSSTSVPPTPRSEGEILQSSNLKSFSFSELRNATRNFRPDSVLGEGGFGSVFKGWIDENL 180
           +SS SVPPTPRSEGEILQSSNLKSFSFS+L+ ATRNFRPDSVLGEGGFGSVFKGWIDE  
Sbjct: 24  VSSLSVPPTPRSEGEILQSSNLKSFSFSDLKMATRNFRPDSVLGEGGFGSVFKGWIDEQT 83

Query: 181 LTATKPGTGIVIAVKRLNQEGF 246
            +A KPGTG+VIAVKRLNQ+GF
Sbjct: 84  FSAAKPGTGMVIAVKRLNQDGF 105


>ref|XP_002299870.1| predicted protein [Populus trichocarpa] gi|222847128|gb|EEE84675.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  493 bits (1269), Expect(2) = e-172
 Identities = 243/301 (80%), Positives = 271/301 (90%), Gaps = 3/301 (0%)
 Frame = +3

Query: 297  LNQEGFQGHKEWLAEVNYLGQFYHPNLVRLVGYCLEDEHRLLVYEFMPRGSLENHLFRRG 476
            LNQ+GFQGHKEWLAEVNYLGQFYHP+LV+L+GYCLEDEHRLLVYEFMPRGSLENHLFRRG
Sbjct: 114  LNQDGFQGHKEWLAEVNYLGQFYHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 173

Query: 477  SYFQPLSWNLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKD 656
            SYFQPLSWNLR+KVALGAAKGLAFLH AET+VIYRDFKTSNILLDS YNAKLSDFGLAKD
Sbjct: 174  SYFQPLSWNLRLKVALGAAKGLAFLHCAETQVIYRDFKTSNILLDSKYNAKLSDFGLAKD 233

Query: 657  GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTSKSDVYSFGVVLLEMLSGRRAVDKNRPSG 836
            GPTGDKSHVSTRV+GTYGYAAPEYLATGHLT+KSDVYSFGVVLLEMLSGRRA+DKNRPSG
Sbjct: 234  GPTGDKSHVSTRVIGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSG 293

Query: 837  EHSLVEWAKPYLSHKRKIFRVLDSRLEGQYSLGAAQKAAILALQCLSMEARFRPNMDEVV 1016
            EH+LVEWAKPYL++KRKIFR+LD+RLEGQYS+  A KA+ LAL+CLS+E +FRP MDEVV
Sbjct: 294  EHNLVEWAKPYLANKRKIFRILDNRLEGQYSMDVAFKASTLALRCLSIETKFRPTMDEVV 353

Query: 1017 KALEELKDSKDTKTAQNEQKPNNQTHSSNGMKSRRRSADD---GRNVKAASYPRPTASPL 1187
             A+E+L+DSK+T +A          H+SN  + RRRSADD   GRN   A+YPRP+ SPL
Sbjct: 354  TAMEQLQDSKETGSANG--------HASNAPRIRRRSADDTISGRN--TAAYPRPSTSPL 403

Query: 1188 Y 1190
            Y
Sbjct: 404  Y 404



 Score =  140 bits (354), Expect(2) = e-172
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = +1

Query: 7   STSVPPTPRSEGEILQSSNLKSFSFSELRNATRNFRPDSVLGEGGFGSVFKGWIDENLLT 186
           S SVPPTPRSEGEILQS+NLKSFSFS+L+ ATR+FRPDSVLGEGGFGSVFKGWIDE   +
Sbjct: 40  SVSVPPTPRSEGEILQSTNLKSFSFSDLKMATRSFRPDSVLGEGGFGSVFKGWIDEQSFS 99

Query: 187 ATKPGTGIVIAVKRLNQEGF 246
           A KPGTGIVIAVKRLNQ+GF
Sbjct: 100 AAKPGTGIVIAVKRLNQDGF 119


>emb|CBI16124.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  486 bits (1250), Expect(2) = e-168
 Identities = 242/299 (80%), Positives = 264/299 (88%), Gaps = 1/299 (0%)
 Frame = +3

Query: 297  LNQEGFQGHKEWLAEVNYLGQFYHPNLVRLVGYCLEDEHRLLVYEFMPRGSLENHLFRRG 476
            LN E FQGHKEWLAEVNYLGQ YHP+LV+L+G+C EDEHRLLVYEFMPRGSLENHLFRRG
Sbjct: 114  LNLESFQGHKEWLAEVNYLGQLYHPHLVKLIGFCSEDEHRLLVYEFMPRGSLENHLFRRG 173

Query: 477  SYFQPLSWNLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKD 656
            SYFQPLSWNLR+KVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKD
Sbjct: 174  SYFQPLSWNLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKD 233

Query: 657  GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTSKSDVYSFGVVLLEMLSGRRAVDKNRPSG 836
            GPTGDKSHVSTRVMGTYGYAAPEYLATGHLT++SDVYSFGVVLLEMLSGRRAVDKNRPSG
Sbjct: 234  GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTARSDVYSFGVVLLEMLSGRRAVDKNRPSG 293

Query: 837  EHSLVEWAKPYLSHKRKIFRVLDSRLEGQYSLGAAQKAAILALQCLSMEARFRPNMDEVV 1016
            EH+LVEWAKPYL++KRKIFR+LD+RLEGQYSL  A KA+ LAL+CLS EA+FRP M EVV
Sbjct: 294  EHNLVEWAKPYLANKRKIFRILDNRLEGQYSLEGAHKASNLALRCLSTEAKFRPTMTEVV 353

Query: 1017 KALEELKDSKDTKTAQNEQKPNNQTHSSNGMKSRRRSADD-GRNVKAASYPRPTASPLY 1190
             ALE+L+D K+ +   N          S GMK RRRSADD  +   A +YPRP+ASPLY
Sbjct: 354  TALEQLQDCKEPEITNNR---------SGGMKHRRRSADDKEKPTTAIAYPRPSASPLY 403



 Score =  132 bits (333), Expect(2) = e-168
 Identities = 64/82 (78%), Positives = 71/82 (86%)
 Frame = +1

Query: 1   LSSTSVPPTPRSEGEILQSSNLKSFSFSELRNATRNFRPDSVLGEGGFGSVFKGWIDENL 180
           +S  SVPPTPRSEG+ILQS NLK+F+FSEL+ ATRNFRPDSVLGEGGFGSVFKGWIDE  
Sbjct: 38  VSVASVPPTPRSEGDILQSPNLKNFTFSELKMATRNFRPDSVLGEGGFGSVFKGWIDEQS 97

Query: 181 LTATKPGTGIVIAVKRLNQEGF 246
             A +PGTG+VIAVKRLN E F
Sbjct: 98  FAAARPGTGMVIAVKRLNLESF 119


>ref|NP_001234409.1| protein kinase 1b [Solanum lycopersicum] gi|189163920|gb|ACD77110.1|
            protein kinase 1b [Solanum lycopersicum]
          Length = 401

 Score =  476 bits (1224), Expect(2) = e-167
 Identities = 233/299 (77%), Positives = 264/299 (88%), Gaps = 1/299 (0%)
 Frame = +3

Query: 297  LNQEGFQGHKEWLAEVNYLGQFYHPNLVRLVGYCLEDEHRLLVYEFMPRGSLENHLFRRG 476
            LNQEGFQGH+EWLAEVNYLGQF HP+LV+L+GYCLEDEHRLLVYEF+PRGSLENHLFRRG
Sbjct: 108  LNQEGFQGHREWLAEVNYLGQFSHPHLVKLIGYCLEDEHRLLVYEFVPRGSLENHLFRRG 167

Query: 477  SYFQPLSWNLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKD 656
            SYFQPLSW LR+KVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNY AKLSDFGLAKD
Sbjct: 168  SYFQPLSWKLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYTAKLSDFGLAKD 227

Query: 657  GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTSKSDVYSFGVVLLEMLSGRRAVDKNRPSG 836
            GPTGDKSHVSTRVMGTYGYAAPEY+ATGHLTSKSDVYSFGVVLLEMLSGRRA+DKNRPSG
Sbjct: 228  GPTGDKSHVSTRVMGTYGYAAPEYMATGHLTSKSDVYSFGVVLLEMLSGRRAIDKNRPSG 287

Query: 837  EHSLVEWAKPYLSHKRKIFRVLDSRLEGQYSLGAAQKAAILALQCLSMEARFRPNMDEVV 1016
            EH+LVEWAKPYL +KRK+FRVLD+RLEGQYS+  A K A LAL+CLS + RFRP+M ++V
Sbjct: 288  EHNLVEWAKPYLGNKRKVFRVLDTRLEGQYSMEVASKVANLALRCLSKDPRFRPSMSDIV 347

Query: 1017 KALEELKDSKDTKTAQNEQKPNNQTHSSNGMKSRRRSADDGRNVK-AASYPRPTASPLY 1190
            K +E+L         Q+++  N ++H+SN  + RRRSA+D  N   + +YPRP+ASP Y
Sbjct: 348  KEMEQLYQ-------QSKESGNTRSHASNRPRPRRRSANDVANRNPSVAYPRPSASPPY 399



 Score =  141 bits (355), Expect(2) = e-167
 Identities = 68/81 (83%), Positives = 73/81 (90%)
 Frame = +1

Query: 4   SSTSVPPTPRSEGEILQSSNLKSFSFSELRNATRNFRPDSVLGEGGFGSVFKGWIDENLL 183
           SS+ VP T RSEGEILQS NLKSFSFS+L+ ATRNFRPDSVLGEGGFGSVFKGWIDEN  
Sbjct: 33  SSSRVPSTTRSEGEILQSPNLKSFSFSDLKTATRNFRPDSVLGEGGFGSVFKGWIDENTF 92

Query: 184 TATKPGTGIVIAVKRLNQEGF 246
            ATKPGTG++IAVKRLNQEGF
Sbjct: 93  AATKPGTGVIIAVKRLNQEGF 113


>ref|XP_002266032.1| PREDICTED: protein kinase APK1A, chloroplastic [Vitis vinifera]
            gi|297740368|emb|CBI30550.3| unnamed protein product
            [Vitis vinifera]
          Length = 405

 Score =  469 bits (1206), Expect(2) = e-166
 Identities = 229/298 (76%), Positives = 265/298 (88%), Gaps = 1/298 (0%)
 Frame = +3

Query: 297  LNQEGFQGHKEWLAEVNYLGQFYHPNLVRLVGYCLEDEHRLLVYEFMPRGSLENHLFRRG 476
            LNQEGFQGH+EWLAE+NYLGQ  HPNLV+L+GYCLED+HRLLVYEFMP+GS+ENHLFRRG
Sbjct: 114  LNQEGFQGHREWLAEINYLGQLQHPNLVKLIGYCLEDDHRLLVYEFMPKGSMENHLFRRG 173

Query: 477  SYFQPLSWNLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKD 656
            SYFQPLSW++RM+VA+GAA+GLAFLH+AET+VIYRDFKTSNILLDSNYNAKLSDFGLA+D
Sbjct: 174  SYFQPLSWSVRMEVAIGAARGLAFLHNAETQVIYRDFKTSNILLDSNYNAKLSDFGLARD 233

Query: 657  GPTGDKSHVSTRVMGTYGYAAPEYLATGHLTSKSDVYSFGVVLLEMLSGRRAVDKNRPSG 836
            GPTGDKSHVSTRVMGTYGYAAPEYL+TGHLT+KSDVYSFGVVLLEMLSGRRAVDKNRPSG
Sbjct: 234  GPTGDKSHVSTRVMGTYGYAAPEYLSTGHLTTKSDVYSFGVVLLEMLSGRRAVDKNRPSG 293

Query: 837  EHSLVEWAKPYLSHKRKIFRVLDSRLEGQYSLGAAQKAAILALQCLSMEARFRPNMDEVV 1016
            EH+LVEWAKPYL+ KRKIFRV+D+RLEGQYSL  AQKAA+LALQCL  E R RPNMDEVV
Sbjct: 294  EHNLVEWAKPYLTSKRKIFRVIDTRLEGQYSLDRAQKAAMLALQCLLTEPRARPNMDEVV 353

Query: 1017 KALEELKDSKD-TKTAQNEQKPNNQTHSSNGMKSRRRSADDGRNVKAASYPRPTASPL 1187
             ALE++ + KD  ++   EQ  N+Q+  ++  +  RRSAD      A+SYP+P+ + L
Sbjct: 354  TALEQICEPKDKLRSTTKEQHSNHQSRPNDRPRYHRRSAD------ASSYPKPSVAIL 405



 Score =  144 bits (364), Expect(2) = e-166
 Identities = 69/81 (85%), Positives = 75/81 (92%)
 Frame = +1

Query: 4   SSTSVPPTPRSEGEILQSSNLKSFSFSELRNATRNFRPDSVLGEGGFGSVFKGWIDENLL 183
           SSTS+P TPR+EGEILQ+SNLKSF FSELR ATRNFRPDSVLGEGGFGSVFKGWIDEN L
Sbjct: 39  SSTSIPQTPRTEGEILQASNLKSFGFSELRTATRNFRPDSVLGEGGFGSVFKGWIDENSL 98

Query: 184 TATKPGTGIVIAVKRLNQEGF 246
            AT+PG G+V+AVKRLNQEGF
Sbjct: 99  MATRPGAGMVVAVKRLNQEGF 119


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