BLASTX nr result
ID: Coptis25_contig00006928
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006928
(742 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65782.1| hypothetical protein VITISV_010562 [Vitis vinifera] 116 4e-55
ref|XP_003633653.1| PREDICTED: DNA-damage-repair/toleration prot... 116 4e-55
ref|XP_002277284.1| PREDICTED: DNA-damage-repair/toleration prot... 116 4e-55
ref|XP_003554696.1| PREDICTED: DNA-damage-repair/toleration prot... 116 2e-54
gb|ACU19951.1| unknown [Glycine max] 116 2e-54
>emb|CAN65782.1| hypothetical protein VITISV_010562 [Vitis vinifera]
Length = 316
Score = 116 bits (291), Expect(3) = 4e-55
Identities = 56/81 (69%), Positives = 70/81 (86%)
Frame = -1
Query: 544 LNIQVEDIGTDKYYSVGEEVGRRVSAAGDDTDTRGLVACGTGVGVSIFANKFPGVYASTC 365
LNI+VED+GTD YYSV E+GRRVS++ +DT RGL+ACGTGVGV++FANKFPGV+A+TC
Sbjct: 34 LNIEVEDVGTDSYYSVAAEIGRRVSSSPEDT--RGLLACGTGVGVAMFANKFPGVFAATC 91
Query: 364 ATVDEAQNSRSINNCNVLAVS 302
+ +A N+RSINN NVLAVS
Sbjct: 92 LSAADALNARSINNSNVLAVS 112
Score = 95.9 bits (237), Expect(3) = 4e-55
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Frame = -2
Query: 195 WLNTPFKSPCPASDNAPWPADIDSFLTGSVEEMSKIGSE--KNGESCAICNLAKNREFEA 22
WL TPFKSPCPAS+ PWP +I+SFL SV EMSKIGSE K +SC+IC L KNRE
Sbjct: 128 WLKTPFKSPCPASEFKPWPKEIESFLDNSVSEMSKIGSEKTKTSDSCSICCLVKNRELNP 187
Query: 21 VDIMPGG 1
+DI+PGG
Sbjct: 188 IDIIPGG 194
Score = 50.1 bits (118), Expect(3) = 4e-55
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 713 MAEESR-RPLKIITGADSLGSPLKDALVDHLKSLNIQVED 597
MAE+ KI+TGADS G LK+ALV HLKSLNI+VED
Sbjct: 1 MAEDGEPHRFKIVTGADSFGCSLKEALVSHLKSLNIEVED 40
>ref|XP_003633653.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like isoform
2 [Vitis vinifera]
Length = 312
Score = 116 bits (291), Expect(3) = 4e-55
Identities = 56/81 (69%), Positives = 70/81 (86%)
Frame = -1
Query: 544 LNIQVEDIGTDKYYSVGEEVGRRVSAAGDDTDTRGLVACGTGVGVSIFANKFPGVYASTC 365
LNI+VED+GTD YYSV E+GRRVS++ +DT RGL+ACGTGVGV++FANKFPGV+A+TC
Sbjct: 34 LNIEVEDVGTDSYYSVAAEIGRRVSSSPEDT--RGLLACGTGVGVAMFANKFPGVFAATC 91
Query: 364 ATVDEAQNSRSINNCNVLAVS 302
+ +A N+RSINN NVLAVS
Sbjct: 92 LSAADALNARSINNSNVLAVS 112
Score = 95.9 bits (237), Expect(3) = 4e-55
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Frame = -2
Query: 195 WLNTPFKSPCPASDNAPWPADIDSFLTGSVEEMSKIGSE--KNGESCAICNLAKNREFEA 22
WL TPFKSPCPAS+ PWP +I+SFL SV EMSKIGSE K +SC+IC L KNRE
Sbjct: 128 WLKTPFKSPCPASEFKPWPKEIESFLDNSVSEMSKIGSEKTKTSDSCSICCLVKNRELNP 187
Query: 21 VDIMPGG 1
+DI+PGG
Sbjct: 188 IDIIPGG 194
Score = 50.1 bits (118), Expect(3) = 4e-55
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 713 MAEESR-RPLKIITGADSLGSPLKDALVDHLKSLNIQVED 597
MAE+ KI+TGADS G LK+ALV HLKSLNI+VED
Sbjct: 1 MAEDGEPHRFKIVTGADSFGCSLKEALVSHLKSLNIEVED 40
>ref|XP_002277284.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like isoform
1 [Vitis vinifera]
Length = 300
Score = 116 bits (291), Expect(3) = 4e-55
Identities = 56/81 (69%), Positives = 70/81 (86%)
Frame = -1
Query: 544 LNIQVEDIGTDKYYSVGEEVGRRVSAAGDDTDTRGLVACGTGVGVSIFANKFPGVYASTC 365
LNI+VED+GTD YYSV E+GRRVS++ +DT RGL+ACGTGVGV++FANKFPGV+A+TC
Sbjct: 34 LNIEVEDVGTDSYYSVAAEIGRRVSSSPEDT--RGLLACGTGVGVAMFANKFPGVFAATC 91
Query: 364 ATVDEAQNSRSINNCNVLAVS 302
+ +A N+RSINN NVLAVS
Sbjct: 92 LSAADALNARSINNSNVLAVS 112
Score = 95.9 bits (237), Expect(3) = 4e-55
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Frame = -2
Query: 195 WLNTPFKSPCPASDNAPWPADIDSFLTGSVEEMSKIGSE--KNGESCAICNLAKNREFEA 22
WL TPFKSPCPAS+ PWP +I+SFL SV EMSKIGSE K +SC+IC L KNRE
Sbjct: 128 WLKTPFKSPCPASEFKPWPKEIESFLDNSVSEMSKIGSEKTKTSDSCSICCLVKNRELNP 187
Query: 21 VDIMPGG 1
+DI+PGG
Sbjct: 188 IDIIPGG 194
Score = 50.1 bits (118), Expect(3) = 4e-55
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 713 MAEESR-RPLKIITGADSLGSPLKDALVDHLKSLNIQVED 597
MAE+ KI+TGADS G LK+ALV HLKSLNI+VED
Sbjct: 1 MAEDGEPHRFKIVTGADSFGCSLKEALVSHLKSLNIEVED 40
>ref|XP_003554696.1| PREDICTED: DNA-damage-repair/toleration protein DRT102-like
[Glycine max]
Length = 300
Score = 116 bits (290), Expect(3) = 2e-54
Identities = 58/81 (71%), Positives = 66/81 (81%)
Frame = -1
Query: 544 LNIQVEDIGTDKYYSVGEEVGRRVSAAGDDTDTRGLVACGTGVGVSIFANKFPGVYASTC 365
LNIQVED+GT YYS G EVGRRVS + +D RGLVACGTG GVSIFANK+PGVYA+TC
Sbjct: 33 LNIQVEDLGTSSYYSAGAEVGRRVSQSSS-SDIRGLVACGTGAGVSIFANKYPGVYAATC 91
Query: 364 ATVDEAQNSRSINNCNVLAVS 302
+ +A N+RSINN NVLAVS
Sbjct: 92 LSPSDAVNARSINNSNVLAVS 112
Score = 87.4 bits (215), Expect(3) = 2e-54
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = -2
Query: 195 WLNTPFKSPCPASDNAPWPADIDSFLTGSVEEMSKIGSEKNGESCAICNLAKNREFEAVD 16
WLNTPFKS CPA+D+ PWP +I SFL S+ EM +IG E ++CA+C L KNRE +D
Sbjct: 128 WLNTPFKSACPANDDKPWPQEIHSFLEHSLVEMPEIGKEGAFDTCAVCCLVKNRELNPID 187
Query: 15 IMPGG 1
++PGG
Sbjct: 188 LIPGG 192
Score = 56.6 bits (135), Expect(3) = 2e-54
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -3
Query: 713 MAEESRRPLKIITGADSLGSPLKDALVDHLKSLNIQVED 597
MA E RP+KII AD G+PLKDALV HL++LNIQVED
Sbjct: 1 MAAEPTRPVKIIAAADDFGTPLKDALVAHLRTLNIQVED 39
>gb|ACU19951.1| unknown [Glycine max]
Length = 300
Score = 116 bits (290), Expect(3) = 2e-54
Identities = 58/81 (71%), Positives = 66/81 (81%)
Frame = -1
Query: 544 LNIQVEDIGTDKYYSVGEEVGRRVSAAGDDTDTRGLVACGTGVGVSIFANKFPGVYASTC 365
LNIQVED+GT YYS G EVGRRVS + +D RGLVACGTG GVSIFANK+PGVYA+TC
Sbjct: 33 LNIQVEDLGTSSYYSAGAEVGRRVSQSSS-SDIRGLVACGTGAGVSIFANKYPGVYAATC 91
Query: 364 ATVDEAQNSRSINNCNVLAVS 302
+ +A N+RSINN NVLAVS
Sbjct: 92 LSPSDAVNARSINNSNVLAVS 112
Score = 87.4 bits (215), Expect(3) = 2e-54
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = -2
Query: 195 WLNTPFKSPCPASDNAPWPADIDSFLTGSVEEMSKIGSEKNGESCAICNLAKNREFEAVD 16
WLNTPFKS CPA+D+ PWP +I SFL S+ EM +IG E ++CA+C L KNRE +D
Sbjct: 128 WLNTPFKSACPANDDKPWPQEIHSFLEHSLVEMPEIGKEGAFDTCAVCCLVKNRELNPID 187
Query: 15 IMPGG 1
++PGG
Sbjct: 188 LIPGG 192
Score = 56.6 bits (135), Expect(3) = 2e-54
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -3
Query: 713 MAEESRRPLKIITGADSLGSPLKDALVDHLKSLNIQVED 597
MA E RP+KII AD G+PLKDALV HL++LNIQVED
Sbjct: 1 MAAEPTRPVKIIAAADDFGTPLKDALVAHLRTLNIQVED 39