BLASTX nr result

ID: Coptis25_contig00006925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006925
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136569.1| PREDICTED: probable plastid-lipid-associated...   357   3e-96
ref|NP_001242119.1| uncharacterized protein LOC100779837 [Glycin...   346   7e-93
gb|AFK43352.1| unknown [Medicago truncatula]                          344   3e-92
gb|ABK96151.1| unknown [Populus trichocarpa]                          344   3e-92
ref|XP_003519042.1| PREDICTED: probable plastid-lipid-associated...   343   4e-92

>ref|XP_004136569.1| PREDICTED: probable plastid-lipid-associated protein 13,
           chloroplastic-like [Cucumis sativus]
           gi|449525291|ref|XP_004169651.1| PREDICTED: probable
           plastid-lipid-associated protein 13, chloroplastic-like
           [Cucumis sativus]
          Length = 303

 Score =  357 bits (917), Expect = 3e-96
 Identities = 192/289 (66%), Positives = 231/289 (79%), Gaps = 9/289 (3%)
 Frame = +1

Query: 46  PPPSS----SYSVHCLVRRGG-CRKM---KVIRAMVQQQTYQGASANYAKEMERLSAKES 201
           PP SS    S+ +H     GG CR++   ++ RAMVQQ   QGA A YAKEMERLSAKES
Sbjct: 20  PPLSSNAVPSFLLHSRFPSGGRCRRLLCRRLCRAMVQQAA-QGAPAIYAKEMERLSAKES 78

Query: 202 LLLAFKDSGGFESLITGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGT 381
           LLLAFKDSGGFE+L+TG+TTD+QRIDVNERIT LERLNPTPRPTTSPFLEGRWN EW G+
Sbjct: 79  LLLAFKDSGGFEALVTGKTTDMQRIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGS 138

Query: 382 ASPILFVTRFLFQRSPSTLVSLSGIEVALKDGYAKITANTKFLNSIKSKFILTTKISVEG 561
            SP L  T  LFQR PSTL +LS ++  +KDG A+ITAN K LNSI+SK IL+TK+SVEG
Sbjct: 139 GSPGLAAT-ILFQRFPSTLATLSKLDAFIKDGTARITANVKLLNSIESKVILSTKLSVEG 197

Query: 562 PLRMKEESVEGVFETPTVNEEAIPEQLKGAFVQAVGTLKQLPVPIKDLAANGMKIPLGGA 741
           PLR+KEE +EG+ ETP+V+E+A+PEQLK AF Q V T++QLPVPIKD+ A G+++PL G+
Sbjct: 198 PLRLKEEYIEGIIETPSVSEQAVPEQLKSAFGQVVNTVQQLPVPIKDVIAGGLRVPLAGS 257

Query: 742 YQRLYMISYLDEEILILRDTSGVPEVLTKLENLPDPEGVVEP-IVEYES 885
           YQRL MISYLDEEILI+RD SGVPEVLT+L++ P P   +EP   +YES
Sbjct: 258 YQRLMMISYLDEEILIIRDASGVPEVLTRLDSPPSP---LEPNTTDYES 303


>ref|NP_001242119.1| uncharacterized protein LOC100779837 [Glycine max]
           gi|255641773|gb|ACU21156.1| unknown [Glycine max]
          Length = 310

 Score =  346 bits (888), Expect = 7e-93
 Identities = 183/283 (64%), Positives = 220/283 (77%), Gaps = 6/283 (2%)
 Frame = +1

Query: 55  SSSYSVHCL------VRRGGCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAF 216
           SSS S +C        +R G  K    RAMVQQ   QGA A YAKEMERLSAKESLLLAF
Sbjct: 31  SSSSSSYCSWLTLSSPQRVGSNKRWGCRAMVQQAV-QGAPAAYAKEMERLSAKESLLLAF 89

Query: 217 KDSGGFESLITGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPIL 396
           KD+GGFE+L++G+TT+ Q+IDVNERIT LERLNPTPRPTTSPFLEGRWN EW G+ SP L
Sbjct: 90  KDAGGFEALVSGKTTEWQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGL 149

Query: 397 FVTRFLFQRSPSTLVSLSGIEVALKDGYAKITANTKFLNSIKSKFILTTKISVEGPLRMK 576
           F  RF+F+  PSTL +LS ++  +KDG AKITAN + LNSI++K IL+TK+SVEGPLRMK
Sbjct: 150 FAARFIFETFPSTLANLSKMDFVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMK 209

Query: 577 EESVEGVFETPTVNEEAIPEQLKGAFVQAVGTLKQLPVPIKDLAANGMKIPLGGAYQRLY 756
           EE VEGVF TPT+ EE +PEQLKGA  QA   L+QLP PI+D  A+G+K+PL G++QRL+
Sbjct: 210 EEYVEGVFVTPTIIEERVPEQLKGALGQAANALQQLPAPIRDPVASGLKVPLSGSFQRLF 269

Query: 757 MISYLDEEILILRDTSGVPEVLTKLENLPDPEGVVEPIVEYES 885
           MISYLDEEILI+R+T+G+PEVLT+L+  P   G   P  EYES
Sbjct: 270 MISYLDEEILIIRNTAGIPEVLTRLDAAPSILGDSSP--EYES 310


>gb|AFK43352.1| unknown [Medicago truncatula]
          Length = 297

 Score =  344 bits (882), Expect = 3e-92
 Identities = 179/279 (64%), Positives = 220/279 (78%)
 Frame = +1

Query: 49  PPSSSYSVHCLVRRGGCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAFKDSG 228
           P SSS+ V     R   +K  V +AMVQ QT  GA A YAKEMERLSAKESLLLAFKD+G
Sbjct: 25  PSSSSWKVS--TSRITWQKRGVCKAMVQVQT--GAPAAYAKEMERLSAKESLLLAFKDAG 80

Query: 229 GFESLITGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPILFVTR 408
           GFE L++G+TT+ QRIDVNERIT LERLNPTPRPTTSPFLEGRWN EW G  SP LF  R
Sbjct: 81  GFEGLVSGKTTEYQRIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGSPGLFAAR 140

Query: 409 FLFQRSPSTLVSLSGIEVALKDGYAKITANTKFLNSIKSKFILTTKISVEGPLRMKEESV 588
            +F+  PS+L +LS ++V +KDG AKITANT FLNS++S+ IL+TK++VEGPLRMKEE V
Sbjct: 141 MIFENFPSSLANLSKMDVFIKDGNAKITANTLFLNSVESRIILSTKLTVEGPLRMKEEYV 200

Query: 589 EGVFETPTVNEEAIPEQLKGAFVQAVGTLKQLPVPIKDLAANGMKIPLGGAYQRLYMISY 768
           EG+  +PTV E+ +P+QLKGA  QAV  L+QLPVP++D  A+G+K+PL G++QRL+MISY
Sbjct: 201 EGIIVSPTVLEDRVPDQLKGALGQAVNVLQQLPVPLRDALADGLKVPLSGSFQRLFMISY 260

Query: 769 LDEEILILRDTSGVPEVLTKLENLPDPEGVVEPIVEYES 885
           LDEEILI+R+T+G+PEVLT+L+  P   G   P  EYES
Sbjct: 261 LDEEILIIRNTAGIPEVLTRLDASPSSLGESSP--EYES 297


>gb|ABK96151.1| unknown [Populus trichocarpa]
          Length = 311

 Score =  344 bits (882), Expect = 3e-92
 Identities = 173/264 (65%), Positives = 211/264 (79%)
 Frame = +1

Query: 94  GCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAFKDSGGFESLITGETTDIQR 273
           G R+     AMVQQ    G+ A YAKEMERL+AKESLLLAFKDSGGFE+L+TG+TTD+QR
Sbjct: 50  GIRRRMTCTAMVQQAVQGGSPATYAKEMERLAAKESLLLAFKDSGGFEALVTGKTTDMQR 109

Query: 274 IDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPILFVTRFLFQRSPSTLVSLSG 453
           IDVNERIT LERLNPTPRPTTSPFLEGRWN EW G  SP L   RF+F+R PS L +LS 
Sbjct: 110 IDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGAGSPGLSAARFIFERFPSNLANLSK 169

Query: 454 IEVALKDGYAKITANTKFLNSIKSKFILTTKISVEGPLRMKEESVEGVFETPTVNEEAIP 633
           ++V +KDG AK+TA+ K L SI+SKFIL++K++VEGPLRMKEE VEG+ ETPTV EE +P
Sbjct: 170 MDVVIKDGNAKVTAHMKLLYSIESKFILSSKLTVEGPLRMKEEYVEGILETPTVIEETVP 229

Query: 634 EQLKGAFVQAVGTLKQLPVPIKDLAANGMKIPLGGAYQRLYMISYLDEEILILRDTSGVP 813
           EQLKGAF QA+ T++Q+PV  +D  ++G+KIPL   +QRL+MISYLD+EILILRD+ GVP
Sbjct: 230 EQLKGAFGQALSTVQQIPVSFRDAFSSGLKIPLSSTFQRLFMISYLDDEILILRDSIGVP 289

Query: 814 EVLTKLENLPDPEGVVEPIVEYES 885
           EV+T+L+       + EPI EYES
Sbjct: 290 EVVTRLD--APASLMAEPIAEYES 311


>ref|XP_003519042.1| PREDICTED: probable plastid-lipid-associated protein 13,
           chloroplastic-like [Glycine max]
          Length = 299

 Score =  343 bits (881), Expect = 4e-92
 Identities = 181/277 (65%), Positives = 218/277 (78%)
 Frame = +1

Query: 55  SSSYSVHCLVRRGGCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAFKDSGGF 234
           SSS ++  L R  G  K    RAMVQQ   QGA A YAKEMERLSAKESLLLAFKD+GGF
Sbjct: 28  SSSLTLSSLQR--GSNKRSGCRAMVQQAV-QGAPAAYAKEMERLSAKESLLLAFKDAGGF 84

Query: 235 ESLITGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPILFVTRFL 414
           E+L++G+TT+ Q+IDVNERIT LERLNPTPRPTTSPFLEG+WN EW G+ SP LF  RF+
Sbjct: 85  EALVSGKTTEWQKIDVNERITGLERLNPTPRPTTSPFLEGQWNFEWFGSGSPGLFAARFI 144

Query: 415 FQRSPSTLVSLSGIEVALKDGYAKITANTKFLNSIKSKFILTTKISVEGPLRMKEESVEG 594
           F+  PSTL +LS ++V +KDG AKITAN + LNSI++K IL+TK+SVEGPLRMKEE VEG
Sbjct: 145 FEIFPSTLANLSKMDVVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEG 204

Query: 595 VFETPTVNEEAIPEQLKGAFVQAVGTLKQLPVPIKDLAANGMKIPLGGAYQRLYMISYLD 774
           V  TPT+ EE +PEQLKGA  QA   L+QLP PI D  A+G+K+PL G++QRL+MISYLD
Sbjct: 205 VLVTPTIIEERVPEQLKGALGQAANALQQLPTPIWDPVASGLKVPLSGSFQRLFMISYLD 264

Query: 775 EEILILRDTSGVPEVLTKLENLPDPEGVVEPIVEYES 885
           EEILI+R+T+G+PEVLT+L+  P   G   P  EYES
Sbjct: 265 EEILIIRNTAGIPEVLTRLDAAPSSLGDSSP--EYES 299


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