BLASTX nr result
ID: Coptis25_contig00006909
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006909 (780 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36128.3| unnamed protein product [Vitis vinifera] 183 3e-44 ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloro... 182 7e-44 ref|XP_002516024.1| 30S ribosomal protein S17, putative [Ricinus... 175 9e-42 ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloro... 172 1e-40 ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|2... 167 2e-39 >emb|CBI36128.3| unnamed protein product [Vitis vinifera] Length = 189 Score = 183 bits (465), Expect = 3e-44 Identities = 98/155 (63%), Positives = 117/155 (75%) Frame = +1 Query: 70 MLLTSPSSILQLPPLHSLKISTPFLNGSSPIHLLNKPTSSFPQSNPSTPSFLPTIRAMKT 249 +LL +P+ L L SLK++TPFL+GSS + LL+KP+S+ S P P+FLP IRAMK+ Sbjct: 38 ILLPNPAMSL----LQSLKLTTPFLHGSSNLSLLSKPSSTSLASPPPPPTFLPPIRAMKS 93 Query: 250 MQGRVVCSTNDKTVAVEVVRLAPHPXXXXXXXXXXXXQAHDPENQFKVGDVVQLEKSRPI 429 MQGRVVC+T+DKTVAVEVVRLAPHP QAHDP+NQFKVGDVVQLEKSRPI Sbjct: 94 MQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPI 153 Query: 430 SKTKAFVAVAVPARNRPEPKEAVPQDLGIPLESQQ 534 SKTK FVA+ VP RNR + +EA +L IPLESQQ Sbjct: 154 SKTKTFVAIPVPNRNRAKSQEAAAGELEIPLESQQ 188 >ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Vitis vinifera] Length = 145 Score = 182 bits (462), Expect = 7e-44 Identities = 94/141 (66%), Positives = 110/141 (78%) Frame = +1 Query: 112 LHSLKISTPFLNGSSPIHLLNKPTSSFPQSNPSTPSFLPTIRAMKTMQGRVVCSTNDKTV 291 L SLK++TPFL+GSS + LL+KP+S+ S P P+FLP IRAMK+MQGRVVC+T+DKTV Sbjct: 4 LQSLKLTTPFLHGSSNLSLLSKPSSTSLASPPPPPTFLPPIRAMKSMQGRVVCATSDKTV 63 Query: 292 AVEVVRLAPHPXXXXXXXXXXXXQAHDPENQFKVGDVVQLEKSRPISKTKAFVAVAVPAR 471 AVEVVRLAPHP QAHDP+NQFKVGDVVQLEKSRPISKTK FVA+ VP R Sbjct: 64 AVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPISKTKTFVAIPVPNR 123 Query: 472 NRPEPKEAVPQDLGIPLESQQ 534 NR + +EA +L IPLESQQ Sbjct: 124 NRAKSQEAAAGELEIPLESQQ 144 >ref|XP_002516024.1| 30S ribosomal protein S17, putative [Ricinus communis] gi|223544929|gb|EEF46444.1| 30S ribosomal protein S17, putative [Ricinus communis] Length = 152 Score = 175 bits (444), Expect = 9e-42 Identities = 91/142 (64%), Positives = 109/142 (76%), Gaps = 1/142 (0%) Frame = +1 Query: 112 LHSLKISTPFLNGSSPIHLLNKPTSSFPQSNPSTPSFLPTIRAMKTMQGRVVCSTNDKTV 291 L+SL +STPFLNG++P+ L+KPTSS +P+ SF+P +RAMK++QGRVVC+TNDKTV Sbjct: 7 LNSLTLSTPFLNGTAPLSNLSKPTSSLSLQHPNPFSFMPPVRAMKSIQGRVVCATNDKTV 66 Query: 292 AVEVVRLAPHPXXXXXXXXXXXXQAHDPENQFKVGDVVQLEKSRPISKTKAFVAVAVPAR 471 +VEV RLAPHP QAHDPENQFKVGD+VQLEKS+PISKTKAF+A+ VPAR Sbjct: 67 SVEVTRLAPHPKYKRRVRKKKKFQAHDPENQFKVGDLVQLEKSKPISKTKAFIAIPVPAR 126 Query: 472 NRPEPK-EAVPQDLGIPLESQQ 534 R E K E LGIPLESQQ Sbjct: 127 IRKEKKQENDDGGLGIPLESQQ 148 >ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis sativus] gi|449519627|ref|XP_004166836.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis sativus] Length = 164 Score = 172 bits (435), Expect = 1e-40 Identities = 96/163 (58%), Positives = 120/163 (73%), Gaps = 7/163 (4%) Frame = +1 Query: 67 TMLLTSPSSILQLPPLHSLK---ISTPFLNGSSPIHLLNKPTSSFPQSNPSTPSFLPTIR 237 ++ LTS SS+LQ+PP+ SLK IS+ FL+GS+P+ L+KP+SS TP+FLP+IR Sbjct: 2 SITLTS-SSLLQIPPVQSLKKLSISSSFLHGSTPLSFLSKPSSSSSPFPSQTPNFLPSIR 60 Query: 238 AMKTMQGRVVCSTNDKTVAVEVVRLAPHPXXXXXXXXXXXXQAHDPENQFKVGDVVQLEK 417 AM+++QGRVVC+TNDKTVAVEVVRLAPHP QAHDP+NQF+VGD V+LEK Sbjct: 61 AMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFQVGDFVELEK 120 Query: 418 SRPISKTKAFVAVAVPARNRPEPKEAVP----QDLGIPLESQQ 534 RPISK K F+A+ VPARN K+AV +LGIPLESQQ Sbjct: 121 CRPISKMKTFLAIPVPARN--SKKKAVEGGEGGELGIPLESQQ 161 >ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|222845480|gb|EEE83027.1| predicted protein [Populus trichocarpa] Length = 160 Score = 167 bits (423), Expect = 2e-39 Identities = 94/161 (58%), Positives = 112/161 (69%), Gaps = 5/161 (3%) Frame = +1 Query: 67 TMLLTSPSSILQLPPLHSLKISTPFLNGSSPIHLLNKPTSSFPQSNPSTPSFLPTIRAMK 246 TM LTS L+SL +STPFL+G++ + L+KPTSS +FLP IRAMK Sbjct: 4 TMSLTSS--------LNSLTLSTPFLHGTTQLSHLSKPTSSLTLRPAKPFTFLPPIRAMK 55 Query: 247 TMQGRVVCSTNDKTVAVEVVRLAPHPXXXXXXXXXXXXQAHDPENQFKVGDVVQLEKSRP 426 ++QG+VVC+T+DKTVAVEV RLAPHP QAHDPENQFKVGD+VQLEKSRP Sbjct: 56 SLQGKVVCATSDKTVAVEVTRLAPHPKYKRRVRKKKKYQAHDPENQFKVGDLVQLEKSRP 115 Query: 427 ISKTKAFVAVAVPARNRPEPKEAV-----PQDLGIPLESQQ 534 ISKTK+F+AV VPAR + E KE Q+LGIPLESQQ Sbjct: 116 ISKTKSFLAVPVPARKKKEKKEGEEGGVGSQELGIPLESQQ 156