BLASTX nr result
ID: Coptis25_contig00006900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006900
(1738 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526341.1| zinc finger protein, putative [Ricinus commu... 532 e-148
ref|XP_002282087.1| PREDICTED: uncharacterized protein LOC100241... 531 e-148
emb|CBI16265.3| unnamed protein product [Vitis vinifera] 511 e-142
ref|XP_003538041.1| PREDICTED: uncharacterized protein LOC100790... 510 e-142
ref|XP_003606492.1| IBR domain containing protein [Medicago trun... 497 e-138
>ref|XP_002526341.1| zinc finger protein, putative [Ricinus communis]
gi|223534300|gb|EEF36012.1| zinc finger protein, putative
[Ricinus communis]
Length = 571
Score = 532 bits (1370), Expect = e-148
Identities = 268/521 (51%), Positives = 345/521 (66%), Gaps = 15/521 (2%)
Frame = -2
Query: 1728 ERDMEIAFELQMEEALTDSLLVQPQLAIN----QNRSTPPIPIDPHTVQL-------LSQ 1582
+ D++ AF+LQ++EA+ SL + P + + Q + P TV L +++
Sbjct: 31 DSDLDFAFQLQLQEAINASLSLHPSSSTSRQPQQQPQSAPSSDQNDTVSLPSLLSEEITK 90
Query: 1581 YEREQQAFQNTQRELLKIRNDLKCRVHDQTFARELLRIPEREWRNYGDNIEKPFNNKGAX 1402
E+E + ++ E KI+ DL RVHDQ ARE+LRIPE EWR +GDN EKP+ +
Sbjct: 91 LEQEINDRKQSEFETQKIKEDLHRRVHDQKLAREILRIPEPEWREWGDNFEKPYGEGSSS 150
Query: 1401 XXXXXSGDDRT--GGVEVFRLYFKGLF--RNSGRNXXXXXXXXXXICDPEGNVILNVQKG 1234
G R+ VFRLYFKGL N ICDP N++ ++K
Sbjct: 151 S-----GASRSVQNSDSVFRLYFKGLICEENVRDKKENLAGIGVAICDPVDNLVFEIRKP 205
Query: 1233 LIGDWKSDWDVENLQLKVELKALIEGLNAALSLDIKRIDCFCDYHPLYQYITQRWLVQQQ 1054
L+G+ + E KALIEGLNAAL+L++KRI +CDY+PLYQ+I RW +Q+
Sbjct: 206 LVGNGMG-------RQVAETKALIEGLNAALALELKRIVIYCDYYPLYQFIIGRWPPKQR 258
Query: 1053 RIGTVVDQVCLLQRKFDRSRTFHVARKDVKFAFQLARGAIDSQITRSAESSHARKLKETC 874
++ +V+QV LQ+KF RT V R +K+AF+LA+ AIDSQ+ R A+SS + L+ETC
Sbjct: 259 KVAMLVNQVSFLQKKFTYCRTTLVPRSSIKYAFKLAKDAIDSQVRRPADSSRGKTLQETC 318
Query: 873 NICLEEIDVDQMFAVDGCLHRYCLSCMKQHVEVKLLHGVLPKCPHENCNTQLNIPSCRRF 694
ICLE+ DV ++F+VDGC HRYC SCMKQHVEVKLLH +LPKCPH+ C ++L + SCR+F
Sbjct: 319 VICLEDTDVKRIFSVDGCRHRYCFSCMKQHVEVKLLHVMLPKCPHDGCKSELTVDSCRKF 378
Query: 693 LTPDLIDKMNQHMMEASIPVTDKIYCPYPKCSVLMSKAEVMRYTDKVFVGVDRFATGKCI 514
LTP LI+ M+Q M EASIP +++IYCPYPKCS LMS+ EV G +R KC+
Sbjct: 379 LTPKLIEIMSQRMKEASIPASERIYCPYPKCSALMSRNEVSD-------GSERSGARKCL 431
Query: 513 KCQCLFCMNCKVPWHFNLNCREYKRSNPNSNMEDVKLKSLATKQSWRQCIKCNHMIELAE 334
KC LFC+NCKVPWH N+ C YK NPN ED KLKSLATK WRQC+KCNHMIELAE
Sbjct: 432 KCHALFCINCKVPWHSNMTCGIYKLLNPNPPGEDGKLKSLATKNLWRQCVKCNHMIELAE 491
Query: 333 GCYHMTCRCGYEFCYTCGAEWRNKKATCSCPIWDEANIVND 211
GCYHMTCRCGYEFCY CGAEW++KKATCSCPIWDE I++D
Sbjct: 492 GCYHMTCRCGYEFCYNCGAEWKDKKATCSCPIWDENYILHD 532
>ref|XP_002282087.1| PREDICTED: uncharacterized protein LOC100241711 [Vitis vinifera]
Length = 557
Score = 531 bits (1367), Expect = e-148
Identities = 262/516 (50%), Positives = 335/516 (64%), Gaps = 13/516 (2%)
Frame = -2
Query: 1728 ERDMEIAFELQMEEALTDSLLVQPQLAINQNRSTPPIPIDPHT-----------VQLLSQ 1582
E D+++AF LQ+EEAL S+ P + S+PP +P T L +
Sbjct: 29 ESDLDLAFRLQLEEALAASMSSLPSTS-----SSPPRVQNPDTDCFVSGLRALQTDELDR 83
Query: 1581 YEREQQAFQNTQRELLKIRNDLKCRVHDQTFARELLRIPEREWRNYGDNIEKPFNNKGAX 1402
E+E + Q ++ E+ K+R D+ R HDQ ARE+ ++PE EW YGDN E+PF
Sbjct: 84 LEQEVRDRQQSEAEMTKLREDIHRRAHDQKLAREISQMPEEEWEEYGDNYERPF------ 137
Query: 1401 XXXXXSGDDRTGGVEVFRLYFKGLFRNS--GRNXXXXXXXXXXICDPEGNVILNVQKGLI 1228
G+ + G EVFR++FKGL R G + ICD N++ +QK L+
Sbjct: 138 ------GEGSSSG-EVFRVFFKGLAREEKIGNSREPIMGIGVSICDFRDNLVFELQKPLV 190
Query: 1227 GDWKSDWDVENLQLKVELKALIEGLNAALSLDIKRIDCFCDYHPLYQYITQRWLVQQQRI 1048
G KS E +A+IE LNAAL+LD+ R+D FCD+ PLYQ + +W + ++I
Sbjct: 191 GCGKS-------HEYAETRAMIEALNAALALDLTRVDLFCDHQPLYQRVRGKWPPKNRKI 243
Query: 1047 GTVVDQVCLLQRKFDRSRTFHVARKDVKFAFQLARGAIDSQITRSAESSHARKLKETCNI 868
++DQV +L++KF F V R D+KFA +LA AI+SQI R A+ H LKETC I
Sbjct: 244 AALLDQVAVLRKKFTYCNLFLVIRHDIKFAIKLANDAINSQIMRPAKFLHGNNLKETCII 303
Query: 867 CLEEIDVDQMFAVDGCLHRYCLSCMKQHVEVKLLHGVLPKCPHENCNTQLNIPSCRRFLT 688
CLE+ D+ QMF+VD CLHRYC SCMKQHVEVKLLHG++PKCPHE C + L I SC +FLT
Sbjct: 304 CLEDTDIGQMFSVDSCLHRYCFSCMKQHVEVKLLHGMVPKCPHEGCKSLLKIDSCGKFLT 363
Query: 687 PDLIDKMNQHMMEASIPVTDKIYCPYPKCSVLMSKAEVMRYTDKVFVGVDRFATGKCIKC 508
P LI M+Q + E SIPVT+K+YCPYP+CS LMSK E + Y + VG R KC+ C
Sbjct: 364 PKLIGIMSQRLKEDSIPVTEKVYCPYPRCSALMSKKEALEYANTTSVGAIRAGARKCMTC 423
Query: 507 QCLFCMNCKVPWHFNLNCREYKRSNPNSNMEDVKLKSLATKQSWRQCIKCNHMIELAEGC 328
LFC+NC VPWH + C EYKRSNP ED KLKSLAT+ WRQC+KCNH+IELAEGC
Sbjct: 424 NGLFCINCMVPWHSKMTCFEYKRSNPFPQAEDAKLKSLATRNLWRQCVKCNHLIELAEGC 483
Query: 327 YHMTCRCGYEFCYTCGAEWRNKKATCSCPIWDEANI 220
+H+TCRCGYEFCYTCGAEW+NKKATCSCP+WDE NI
Sbjct: 484 FHITCRCGYEFCYTCGAEWKNKKATCSCPLWDEDNI 519
>emb|CBI16265.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 511 bits (1315), Expect = e-142
Identities = 262/557 (47%), Positives = 335/557 (60%), Gaps = 54/557 (9%)
Frame = -2
Query: 1728 ERDMEIAFELQMEEALTDSLLVQPQLAINQNRSTPPIPIDPHT-----------VQLLSQ 1582
E D+++AF LQ+EEAL S+ P + S+PP +P T L +
Sbjct: 29 ESDLDLAFRLQLEEALAASMSSLPSTS-----SSPPRVQNPDTDCFVSGLRALQTDELDR 83
Query: 1581 YEREQQAFQNTQRELLKIRNDLKCRVHDQTFARELLRIPEREWRNYGDNIEKPFNNKGAX 1402
E+E + Q ++ E+ K+R D+ R HDQ ARE+ ++PE EW YGDN E+PF
Sbjct: 84 LEQEVRDRQQSEAEMTKLREDIHRRAHDQKLAREISQMPEEEWEEYGDNYERPF------ 137
Query: 1401 XXXXXSGDDRTGGVEVFRLYFKGLFRNS--GRNXXXXXXXXXXICDPEGNVILNVQKGLI 1228
G+ + G EVFR++FKGL R G + ICD N++ +QK L+
Sbjct: 138 ------GEGSSSG-EVFRVFFKGLAREEKIGNSREPIMGIGVSICDFRDNLVFELQKPLV 190
Query: 1227 GDWKSDWDVENLQLKVELKALIEGLNAALSLDIKRIDCFCDYHPLYQ------------- 1087
G KS E +A+IE LNAAL+LD+ R+D FCD+ PLYQ
Sbjct: 191 GCGKS-------HEYAETRAMIEALNAALALDLTRVDLFCDHQPLYQRVILWFLFWFQTN 243
Query: 1086 ----------------------------YITQRWLVQQQRIGTVVDQVCLLQRKFDRSRT 991
+ +W + ++I ++DQV +L++KF
Sbjct: 244 EKMNLNGSWTVKHMTIINGTIVQNVKFDSVRGKWPPKNRKIAALLDQVAVLRKKFTYCNL 303
Query: 990 FHVARKDVKFAFQLARGAIDSQITRSAESSHARKLKETCNICLEEIDVDQMFAVDGCLHR 811
F V R D+KFA +LA AI+SQI R A+ H LKETC ICLE+ D+ QMF+VD CLHR
Sbjct: 304 FLVIRHDIKFAIKLANDAINSQIMRPAKFLHGNNLKETCIICLEDTDIGQMFSVDSCLHR 363
Query: 810 YCLSCMKQHVEVKLLHGVLPKCPHENCNTQLNIPSCRRFLTPDLIDKMNQHMMEASIPVT 631
YC SCMKQHVEVKLLHG++PKCPHE C + L I SC +FLTP LI M+Q + E SIPVT
Sbjct: 364 YCFSCMKQHVEVKLLHGMVPKCPHEGCKSLLKIDSCGKFLTPKLIGIMSQRLKEDSIPVT 423
Query: 630 DKIYCPYPKCSVLMSKAEVMRYTDKVFVGVDRFATGKCIKCQCLFCMNCKVPWHFNLNCR 451
+K+YCPYP+CS LMSK E + Y + VG R KC+ C LFC+NC VPWH + C
Sbjct: 424 EKVYCPYPRCSALMSKKEALEYANTTSVGAIRAGARKCMTCNGLFCINCMVPWHSKMTCF 483
Query: 450 EYKRSNPNSNMEDVKLKSLATKQSWRQCIKCNHMIELAEGCYHMTCRCGYEFCYTCGAEW 271
EYKRSNP ED KLKSLAT+ WRQC+KCNH+IELAEGC+H+TCRCGYEFCYTCGAEW
Sbjct: 484 EYKRSNPFPQAEDAKLKSLATRNLWRQCVKCNHLIELAEGCFHITCRCGYEFCYTCGAEW 543
Query: 270 RNKKATCSCPIWDEANI 220
+NKKATCSCP+WDE NI
Sbjct: 544 KNKKATCSCPLWDEDNI 560
>ref|XP_003538041.1| PREDICTED: uncharacterized protein LOC100790037 [Glycine max]
Length = 557
Score = 510 bits (1313), Expect = e-142
Identities = 259/515 (50%), Positives = 336/515 (65%), Gaps = 12/515 (2%)
Frame = -2
Query: 1728 ERDMEIAFELQMEEALTDSLLVQPQLAINQNRSTPPIPI------DPHTVQL----LSQY 1579
E D++ AF LQ++EAL SL QP + + P+ D + + L L++
Sbjct: 25 ELDLDFAFRLQLKEALAASLAAQPSSSSAAAAAIIEQPVVVIHDDDVNAMTLQREELARM 84
Query: 1578 EREQQAFQNTQRELLKIRNDLKCRVHDQTFARELLRIPEREWRNYGDNIEKPFNNKGAXX 1399
ERE + + ++ E LK+R +L R+HD+ ARE+ IPE++W+ +GDN EKPF +
Sbjct: 85 EREMKDREQSEAETLKMREELCRRIHDEKVAREISAIPEKDWQQWGDNFEKPFGEGSSSS 144
Query: 1398 XXXXSGDDRTGGVEVFRLYFKGLF--RNSGRNXXXXXXXXXXICDPEGNVILNVQKGLIG 1225
R GV R+YFKGL N ICD N+I V K LIG
Sbjct: 145 SL-----SREEGV--VRVYFKGLVSEENVRGRKVVLSGIGVAICDLSDNLIFEVSKSLIG 197
Query: 1224 DWKSDWDVENLQLKVELKALIEGLNAALSLDIKRIDCFCDYHPLYQYITQRWLVQQQRIG 1045
+ S ++ E+KALIE NAA++LD+KR+ CDY+PL+Q+++ +W +Q++I
Sbjct: 198 NGTS-------KVAAEIKALIEAFNAAIALDLKRVVYCCDYYPLFQFVSGKWPAKQRKIA 250
Query: 1044 TVVDQVCLLQRKFDRSRTFHVARKDVKFAFQLARGAIDSQITRSAESSHARKLKETCNIC 865
+VDQV LLQRKF VAR DVKFAF+LAR AI+SQ TR AES +R L ETC IC
Sbjct: 251 ILVDQVNLLQRKFSYCNPRFVARHDVKFAFKLARDAIESQSTRLAESG-SRSLNETCVIC 309
Query: 864 LEEIDVDQMFAVDGCLHRYCLSCMKQHVEVKLLHGVLPKCPHENCNTQLNIPSCRRFLTP 685
LEE DV Q+F+VDGC HRYC SCMKQHVEVKLLHG++PKCPH+ C +L + SC++FLT
Sbjct: 310 LEETDVGQIFSVDGCQHRYCFSCMKQHVEVKLLHGMVPKCPHQGCKYELLVDSCQKFLTQ 369
Query: 684 DLIDKMNQHMMEASIPVTDKIYCPYPKCSVLMSKAEVMRYTDKVFVGVDRFATGKCIKCQ 505
L + M Q +EASIPV +KIYCPYP CS LMSK EV+ Y+ + ++ C+KC+
Sbjct: 370 KLTETMQQRKLEASIPVAEKIYCPYPTCSALMSKTEVLEYSKDITGQSEQSEPKICLKCR 429
Query: 504 CLFCMNCKVPWHFNLNCREYKRSNPNSNMEDVKLKSLATKQSWRQCIKCNHMIELAEGCY 325
LFC NCKVPWH + C YKR NP ED+KLK LA++ W+QC+KCNHMIELAEGCY
Sbjct: 430 GLFCFNCKVPWHSGMTCNTYKRMNPIPPAEDLKLKFLASRSLWQQCLKCNHMIELAEGCY 489
Query: 324 HMTCRCGYEFCYTCGAEWRNKKATCSCPIWDEANI 220
HMTCRCGYEFCY CGAEW++KKATC+CP+W E NI
Sbjct: 490 HMTCRCGYEFCYNCGAEWKDKKATCACPLWAEENI 524
>ref|XP_003606492.1| IBR domain containing protein [Medicago truncatula]
gi|355507547|gb|AES88689.1| IBR domain containing protein
[Medicago truncatula]
Length = 541
Score = 497 bits (1280), Expect = e-138
Identities = 247/510 (48%), Positives = 327/510 (64%), Gaps = 7/510 (1%)
Frame = -2
Query: 1728 ERDMEIAFELQMEEALTDSLLVQPQLAINQNRSTPPIPIDPHTVQLLSQYEREQQAFQ-- 1555
E D++ A+ LQ++EAL+ SL QP + P I L E E+ A +
Sbjct: 28 ESDLDFAYNLQLQEALSASLTDQPSSSTAVFLEDPSISDSVFNANSLQLQELEKMAIEMN 87
Query: 1554 ---NTQRELLKIRNDLKCRVHDQTFARELLRIPEREWRNYGDNIEKPFNNKGAXXXXXXS 1384
++R + + R+DL R+HDQ A E+ +P ++W +GDN EKPF +
Sbjct: 88 DRLQSERAMREARDDLNRRIHDQKMASEIFNMPVKDWDEWGDNFEKPFGEGSSSGSTM-- 145
Query: 1383 GDDRTGGVEVFRLYFKGLFRNSG--RNXXXXXXXXXXICDPEGNVILNVQKGLIGDWKSD 1210
R V R+YFKGL +CD E N+IL + K + G+
Sbjct: 146 ---RNNEGPVVRVYFKGLVSEESVRGESVSLAGIGVAVCDDEDNLILEISKTVDGN---- 198
Query: 1209 WDVENLQLKVELKALIEGLNAALSLDIKRIDCFCDYHPLYQYITQRWLVQQQRIGTVVDQ 1030
E+ ++ VEL ALIEG NA ++LD+KR+ F DY+ L+Q+++ +W +Q ++ ++++
Sbjct: 199 ---ESRKIAVELMALIEGFNAVIALDLKRVIYFGDYYTLFQHLSGKWASKQPKVAALLNE 255
Query: 1029 VCLLQRKFDRSRTFHVARKDVKFAFQLARGAIDSQITRSAESSHARKLKETCNICLEEID 850
V +LQRKF VAR D+KFAF+LAR AI SQ R AESS + L ETC ICLE+ D
Sbjct: 256 VNMLQRKFAYCSPRLVARHDLKFAFKLARDAIVSQSMRPAESSGVKSLNETCVICLEDSD 315
Query: 849 VDQMFAVDGCLHRYCLSCMKQHVEVKLLHGVLPKCPHENCNTQLNIPSCRRFLTPDLIDK 670
V Q F+VDGC HRYC SCM+QHVEVKLLHG++P CPHE C +L + SCR+FLT L++
Sbjct: 316 VSQFFSVDGCQHRYCFSCMRQHVEVKLLHGMVPICPHEGCKNELLVDSCRKFLTSKLVET 375
Query: 669 MNQHMMEASIPVTDKIYCPYPKCSVLMSKAEVMRYTDKVFVGVDRFATGKCIKCQCLFCM 490
M Q +EASIP T+KIYCPYP+CS LMSK EV+ Y+ K +G + KC+KC LFC
Sbjct: 376 MQQRNLEASIPHTEKIYCPYPRCSALMSKTEVLDYS-KSLMGSVQSMPKKCVKCHGLFCF 434
Query: 489 NCKVPWHFNLNCREYKRSNPNSNMEDVKLKSLATKQSWRQCIKCNHMIELAEGCYHMTCR 310
+CKVPWH + C YKR NPN EDVKLKSLA++ W+QC+KCNHMIELAEGCYHMTCR
Sbjct: 435 SCKVPWHSGMTCYTYKRLNPNPPSEDVKLKSLASRSLWKQCVKCNHMIELAEGCYHMTCR 494
Query: 309 CGYEFCYTCGAEWRNKKATCSCPIWDEANI 220
CG+EFCY CGAEW++KKATCSCP+W+E NI
Sbjct: 495 CGFEFCYKCGAEWKDKKATCSCPLWEEDNI 524