BLASTX nr result

ID: Coptis25_contig00006897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006897
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246...   100   9e-20
ref|XP_004151872.1| PREDICTED: uncharacterized protein LOC101212...   100   1e-19
ref|NP_180787.1| uncharacterized protein [Arabidopsis thaliana] ...   100   1e-19
gb|ABK92874.1| unknown [Populus trichocarpa]                          100   2e-19
gb|ACU19245.1| unknown [Glycine max]                                   99   5e-19

>ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246598 [Vitis vinifera]
           gi|297739331|emb|CBI28982.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/61 (72%), Positives = 53/61 (86%)
 Frame = -1

Query: 410 CLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFAS 231
           CLV SWII+AVGFS+L+IGTLSN KSR SCG +HH +LSIGGILCFVH LFCV+Y + A+
Sbjct: 97  CLVFSWIILAVGFSMLVIGTLSNHKSRTSCGFSHHHFLSIGGILCFVHALFCVAYYVSAT 156

Query: 230 S 228
           +
Sbjct: 157 A 157


>ref|XP_004151872.1| PREDICTED: uncharacterized protein LOC101212188 [Cucumis sativus]
           gi|449484054|ref|XP_004156770.1| PREDICTED:
           uncharacterized LOC101212188 [Cucumis sativus]
          Length = 158

 Score =  100 bits (249), Expect = 1e-19
 Identities = 42/62 (67%), Positives = 54/62 (87%)
 Frame = -1

Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234
           ACL+ +WII+AVG S+L+IG + N+KSRASCG THH +LSIGGILCFVHGLFCV+Y + A
Sbjct: 95  ACLIFTWIILAVGMSMLVIGAMGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTA 154

Query: 233 SS 228
           ++
Sbjct: 155 TA 156


>ref|NP_180787.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297822995|ref|XP_002879380.1| hypothetical protein
           ARALYDRAFT_482157 [Arabidopsis lyrata subsp. lyrata]
           gi|3831471|gb|AAC69953.1| hypothetical protein
           [Arabidopsis thaliana] gi|44681466|gb|AAS47673.1|
           At2g32280 [Arabidopsis thaliana]
           gi|51969430|dbj|BAD43407.1| hypothetical protein
           [Arabidopsis thaliana] gi|297325219|gb|EFH55639.1|
           hypothetical protein ARALYDRAFT_482157 [Arabidopsis
           lyrata subsp. lyrata] gi|330253568|gb|AEC08662.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 163

 Score =  100 bits (249), Expect = 1e-19
 Identities = 42/64 (65%), Positives = 55/64 (85%)
 Frame = -1

Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234
           ACLVL+WI+ AVGF  ++IGT+SNSKSR+SCG THH +LSIGGILCF+H LFCV+Y + A
Sbjct: 96  ACLVLTWIVFAVGFGSIVIGTMSNSKSRSSCGFTHHHFLSIGGILCFLHALFCVAYYVSA 155

Query: 233 SSTR 222
           ++ +
Sbjct: 156 TAAK 159


>gb|ABK92874.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/62 (67%), Positives = 54/62 (87%)
 Frame = -1

Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234
           AC + +WII+AVG S+L+IGT+SN+KSRASCG THH + SIGGILCFVHGLFCV+Y + A
Sbjct: 96  ACFLFTWIILAVGLSMLVIGTMSNNKSRASCGFTHHHFFSIGGILCFVHGLFCVAYYVSA 155

Query: 233 SS 228
           ++
Sbjct: 156 TA 157


>gb|ACU19245.1| unknown [Glycine max]
          Length = 160

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 37/63 (58%), Positives = 56/63 (88%)
 Frame = -1

Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234
           ACL+L+W+++A+G S+L+IGT+SN++S  SCG +HH +LSIGGI CFVHGLFC++Y +FA
Sbjct: 96  ACLILTWVVLAIGLSMLVIGTMSNNRSDGSCGFSHHHFLSIGGICCFVHGLFCIAYYVFA 155

Query: 233 SST 225
           +++
Sbjct: 156 TAS 158


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