BLASTX nr result
ID: Coptis25_contig00006897
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006897 (413 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246... 100 9e-20 ref|XP_004151872.1| PREDICTED: uncharacterized protein LOC101212... 100 1e-19 ref|NP_180787.1| uncharacterized protein [Arabidopsis thaliana] ... 100 1e-19 gb|ABK92874.1| unknown [Populus trichocarpa] 100 2e-19 gb|ACU19245.1| unknown [Glycine max] 99 5e-19 >ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246598 [Vitis vinifera] gi|297739331|emb|CBI28982.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 100 bits (250), Expect = 9e-20 Identities = 44/61 (72%), Positives = 53/61 (86%) Frame = -1 Query: 410 CLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFAS 231 CLV SWII+AVGFS+L+IGTLSN KSR SCG +HH +LSIGGILCFVH LFCV+Y + A+ Sbjct: 97 CLVFSWIILAVGFSMLVIGTLSNHKSRTSCGFSHHHFLSIGGILCFVHALFCVAYYVSAT 156 Query: 230 S 228 + Sbjct: 157 A 157 >ref|XP_004151872.1| PREDICTED: uncharacterized protein LOC101212188 [Cucumis sativus] gi|449484054|ref|XP_004156770.1| PREDICTED: uncharacterized LOC101212188 [Cucumis sativus] Length = 158 Score = 100 bits (249), Expect = 1e-19 Identities = 42/62 (67%), Positives = 54/62 (87%) Frame = -1 Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234 ACL+ +WII+AVG S+L+IG + N+KSRASCG THH +LSIGGILCFVHGLFCV+Y + A Sbjct: 95 ACLIFTWIILAVGMSMLVIGAMGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTA 154 Query: 233 SS 228 ++ Sbjct: 155 TA 156 >ref|NP_180787.1| uncharacterized protein [Arabidopsis thaliana] gi|297822995|ref|XP_002879380.1| hypothetical protein ARALYDRAFT_482157 [Arabidopsis lyrata subsp. lyrata] gi|3831471|gb|AAC69953.1| hypothetical protein [Arabidopsis thaliana] gi|44681466|gb|AAS47673.1| At2g32280 [Arabidopsis thaliana] gi|51969430|dbj|BAD43407.1| hypothetical protein [Arabidopsis thaliana] gi|297325219|gb|EFH55639.1| hypothetical protein ARALYDRAFT_482157 [Arabidopsis lyrata subsp. lyrata] gi|330253568|gb|AEC08662.1| uncharacterized protein [Arabidopsis thaliana] Length = 163 Score = 100 bits (249), Expect = 1e-19 Identities = 42/64 (65%), Positives = 55/64 (85%) Frame = -1 Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234 ACLVL+WI+ AVGF ++IGT+SNSKSR+SCG THH +LSIGGILCF+H LFCV+Y + A Sbjct: 96 ACLVLTWIVFAVGFGSIVIGTMSNSKSRSSCGFTHHHFLSIGGILCFLHALFCVAYYVSA 155 Query: 233 SSTR 222 ++ + Sbjct: 156 TAAK 159 >gb|ABK92874.1| unknown [Populus trichocarpa] Length = 168 Score = 100 bits (248), Expect = 2e-19 Identities = 42/62 (67%), Positives = 54/62 (87%) Frame = -1 Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234 AC + +WII+AVG S+L+IGT+SN+KSRASCG THH + SIGGILCFVHGLFCV+Y + A Sbjct: 96 ACFLFTWIILAVGLSMLVIGTMSNNKSRASCGFTHHHFFSIGGILCFVHGLFCVAYYVSA 155 Query: 233 SS 228 ++ Sbjct: 156 TA 157 >gb|ACU19245.1| unknown [Glycine max] Length = 160 Score = 98.6 bits (244), Expect = 5e-19 Identities = 37/63 (58%), Positives = 56/63 (88%) Frame = -1 Query: 413 ACLVLSWIIVAVGFSLLIIGTLSNSKSRASCGLTHHRYLSIGGILCFVHGLFCVSYCIFA 234 ACL+L+W+++A+G S+L+IGT+SN++S SCG +HH +LSIGGI CFVHGLFC++Y +FA Sbjct: 96 ACLILTWVVLAIGLSMLVIGTMSNNRSDGSCGFSHHHFLSIGGICCFVHGLFCIAYYVFA 155 Query: 233 SST 225 +++ Sbjct: 156 TAS 158