BLASTX nr result

ID: Coptis25_contig00006893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006893
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632110.1| PREDICTED: uncharacterized protein LOC100853...    69   5e-10
ref|XP_002313511.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002530281.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002328298.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06
ref|XP_003539708.1| PREDICTED: uncharacterized protein LOC100785...    55   6e-06

>ref|XP_003632110.1| PREDICTED: uncharacterized protein LOC100853079 [Vitis vinifera]
          Length = 130

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/115 (38%), Positives = 56/115 (48%)
 Frame = -3

Query: 522 GLAYESPMVLSPSAFEFFHPTXXXXSPNADSPCVTSDCAPLPLXXXXXXXXXXXXSLAHE 343
           GLAYE+PM  SPSAF+FFHP      P+  +PC  S+C+PLP+            SLAH+
Sbjct: 28  GLAYENPMAFSPSAFDFFHPN--GQKPSTQNPCAASNCSPLPM------AAQVEASLAHQ 79

Query: 342 SRLSTSSTNGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQTNTSRANSVQPD 178
           S+ S+     NR                           VTR+ N +RANSVQPD
Sbjct: 80  SKASS-----NRVGAGGIAGIVFGFVFAVLLAMGVYYVAVTRRANLTRANSVQPD 129


>ref|XP_002313511.1| predicted protein [Populus trichocarpa] gi|222849919|gb|EEE87466.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 44/114 (38%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
 Frame = -3

Query: 522 GLAYESPMVLSPSAFEFFHPTXXXXSPNADSPC-VTSDCAPLPLXXXXXXXXXXXXSLAH 346
           GL YE+P+  SPSA EFFHP      PN  SPC  +S C+PLPL              A 
Sbjct: 32  GLVYENPVAFSPSAVEFFHP--KTHEPNVKSPCAASSSCSPLPLAAQLEATDQ-----AQ 84

Query: 345 ESRLSTSSTNGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQTNTSRANSVQ 184
           ES +STS   GNR                           VTR+ N +RANSVQ
Sbjct: 85  ESEISTSQKGGNRLRAGGIAGIVLGVAFAVLLTMGVYHVMVTRKANLNRANSVQ 138


>ref|XP_002530281.1| conserved hypothetical protein [Ricinus communis]
           gi|223530179|gb|EEF32088.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/116 (37%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
 Frame = -3

Query: 522 GLAYESPMVLSPSAFEFFHPTXXXXSPNADSPCV-TSDCAPLPLXXXXXXXXXXXXSLAH 346
           GLAYE+P+  SPSA EFFHP      PN  +PC  +S C+PLPL              A 
Sbjct: 28  GLAYENPVAFSPSAVEFFHP--KTQDPNTKNPCAESSGCSPLPLAAQVEAAQ------AR 79

Query: 345 ESRLSTSSTNGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQTNTSRANSVQPD 178
           ES L TS   G+                            VTR+ N +RANSVQPD
Sbjct: 80  ESLLPTSQKGGSGLGAGGIAGIVIGLAFAVLLAMGGFYIFVTRRANENRANSVQPD 135


>ref|XP_002328298.1| predicted protein [Populus trichocarpa] gi|222837813|gb|EEE76178.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = -3

Query: 522 GLAYESPMVLSPSAFEFFHPTXXXXSPNADSPC-VTSDCAPLPLXXXXXXXXXXXXSLAH 346
           GL YE P+  SPSA EFFHP      PN ++PC  +S C+P PL                
Sbjct: 30  GLVYEKPVAFSPSAVEFFHP--KTQEPNTENPCAASSSCSPFPLAAQLEDTDQT------ 81

Query: 345 ESRLSTSSTNGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQTNTSRANSVQPD 178
           + ++STS   GN+                           +TR+ N +RANS QP+
Sbjct: 82  QGKISTSQRGGNQLGAGGIAGVILGLAFAVLLTMGVYYVTITRKANINRANSDQPN 137


>ref|XP_003539708.1| PREDICTED: uncharacterized protein LOC100785093 [Glycine max]
          Length = 137

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/114 (33%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
 Frame = -3

Query: 522 GLAYESPMVLSPSAFEFFHPTXXXXSPNADSPCVTSDCAPLPLXXXXXXXXXXXXSLAHE 343
           GL YESP+   P+A++FFHP      P    PCV S C+PLPL               +E
Sbjct: 29  GLVYESPVAFPPAAYDFFHPN--AQKPENKDPCVASKCSPLPLAAQVDATQ------IYE 80

Query: 342 SRLSTSSTNGNRXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRQTNTSRA-NSVQ 184
           ++ ST+   G +                           VTRQ N SRA NSVQ
Sbjct: 81  NKASTTQKGGKQIGGGGVAGIITAVAFAVLLAMGIYYVKVTRQANMSRASNSVQ 134


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