BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006892
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   208   1e-51
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   202   1e-49
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              198   1e-48
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48
ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Sela...   180   4e-43

>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  208 bits (530), Expect = 1e-51
 Identities = 96/124 (77%), Positives = 108/124 (87%)
 Frame = +3

Query: 3   VHEFVAGDATHPQAEEIYRKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKL 182
           VHEFVAGD THPQAE+I + W +LL +MK+RGY P T VVLLDM+E +KE  LYRHSEKL
Sbjct: 391 VHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKL 450

Query: 183 AVSFGLMNTPPGTPIRIMKNLRVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSC 362
           AV FGLM TP GTPIRIMKNLRVCEDCHAALK+IS IV+REI+VRDRNRFHCF+DG CSC
Sbjct: 451 AVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIISGIVSREIIVRDRNRFHCFRDGQCSC 510

Query: 363 RDYW 374
           RD+W
Sbjct: 511 RDFW 514


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  202 bits (513), Expect = 1e-49
 Identities = 93/124 (75%), Positives = 108/124 (87%)
 Frame = +3

Query: 3   VHEFVAGDATHPQAEEIYRKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKL 182
           V+ FVAGD THPQ EEI++ W++LL++MK +GYVP+T VVLLDM+ED+KE  LYRHSEKL
Sbjct: 494 VYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKL 553

Query: 183 AVSFGLMNTPPGTPIRIMKNLRVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSC 362
           AV FGL+ T PGT IRIMKNLRVCEDCHAALK+IS +  REIVVRDRNRFHCFK+GSCSC
Sbjct: 554 AVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSC 613

Query: 363 RDYW 374
            DYW
Sbjct: 614 GDYW 617


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  198 bits (504), Expect = 1e-48
 Identities = 89/124 (71%), Positives = 107/124 (86%)
 Frame = +3

Query: 3   VHEFVAGDATHPQAEEIYRKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKL 182
           VHEFVAG+ +HP  E+I+++W+ELLE+M+ +GYVP+T VVLLD++E +K   + RHSEKL
Sbjct: 476 VHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKL 535

Query: 183 AVSFGLMNTPPGTPIRIMKNLRVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSC 362
           A+ FGLMNTP  TPIRIMKNLR+CEDCH+A KLIS IVNREIVVRDRNRFHCF D SCSC
Sbjct: 536 ALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSC 595

Query: 363 RDYW 374
           RDYW
Sbjct: 596 RDYW 599


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  198 bits (504), Expect = 1e-48
 Identities = 89/124 (71%), Positives = 107/124 (86%)
 Frame = +3

Query: 3   VHEFVAGDATHPQAEEIYRKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKL 182
           VHEFVAG+ +HP  E+I+++W+ELLE+M+ +GYVP+T VVLLD++E +K   + RHSEKL
Sbjct: 509 VHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKL 568

Query: 183 AVSFGLMNTPPGTPIRIMKNLRVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSC 362
           A+ FGLMNTP  TPIRIMKNLR+CEDCH+A KLIS IVNREIVVRDRNRFHCF D SCSC
Sbjct: 569 ALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSC 628

Query: 363 RDYW 374
           RDYW
Sbjct: 629 RDYW 632


>ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
           gi|300157279|gb|EFJ23905.1| hypothetical protein
           SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  180 bits (456), Expect = 4e-43
 Identities = 81/124 (65%), Positives = 100/124 (80%)
 Frame = +3

Query: 3   VHEFVAGDATHPQAEEIYRKWQELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKL 182
           VHEF+AGD  HPQ +EIY + Q L  QMK+ GY  DTKVVL D++ED+KE++L+ HSEKL
Sbjct: 362 VHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKL 421

Query: 183 AVSFGLMNTPPGTPIRIMKNLRVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSC 362
           A++FGL++TPPG P+RI+KNLRVC DCHAA K+IS +  REI+VRD NRFH F DG CSC
Sbjct: 422 AIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSC 481

Query: 363 RDYW 374
            DYW
Sbjct: 482 NDYW 485