BLASTX nr result

ID: Coptis25_contig00006889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006889
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula] ...   531   e-148
ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|2...   530   e-148
ref|XP_002523849.1| fucose synthetase, putative [Ricinus communi...   526   e-147
ref|XP_004170092.1| PREDICTED: putative GDP-L-fucose synthase 2-...   525   e-147
ref|XP_004144717.1| PREDICTED: putative GDP-L-fucose synthase 2-...   525   e-146

>ref|XP_003625896.1| GDP-L-fucose synthase [Medicago truncatula]
           gi|355500911|gb|AES82114.1| GDP-L-fucose synthase
           [Medicago truncatula]
          Length = 320

 Score =  531 bits (1368), Expect = e-148
 Identities = 251/300 (83%), Positives = 282/300 (94%)
 Frame = +1

Query: 1   GHKGLVGSAIVKKLSESGYTNLLLRTHSELDLTRQAQVEKFFSTHKPNYVILAAAKVGGI 180
           GH+GLVGSAIV+KL++ G+TNL+LRTH+ELDLTRQ+ VE FF++ KP +VI+AAAKVGGI
Sbjct: 21  GHRGLVGSAIVRKLTQLGFTNLILRTHTELDLTRQSDVEAFFASTKPEFVIVAAAKVGGI 80

Query: 181 HANNTYPAEFISINLQIQTNVIHSAYTNEVKKILFLGSSCIYPKYAPQPIKEDALLTGPL 360
           HANNTYPA+FI+INLQIQTNVI SAY N  KK+LFLGSSCIYPK+APQPI EDALLTGPL
Sbjct: 81  HANNTYPADFIAINLQIQTNVIDSAYRNGAKKLLFLGSSCIYPKFAPQPIPEDALLTGPL 140

Query: 361 EQTNEWYAIAKIAGIKMCQAYRLQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 540
           E TNEWYAIAKIAGIKMCQAYR+Q+ WDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH
Sbjct: 141 EPTNEWYAIAKIAGIKMCQAYRIQHKWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 200

Query: 541 EAKVGNAKEVVVWGSGSPLREFLHVDDLADAVVFLMDKYSGLEHVNIGSGKEVSIKELAE 720
           EAKV  AKEVVVWG+GSPLREFLHVDDLADAVVF+M+KYSG+EH+N+GSGKEV+IKELAE
Sbjct: 201 EAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMEKYSGVEHLNVGSGKEVTIKELAE 260

Query: 721 LVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWVPKISLRDGLVDTYKWYLEYVKQ 900
            +KEVVGF+G+LVWDS+KPDGTPRKLMDSSKLA LGW PK+SL+DGLVDTYKWYLE VKQ
Sbjct: 261 SMKEVVGFEGDLVWDSTKPDGTPRKLMDSSKLAALGWTPKVSLKDGLVDTYKWYLENVKQ 320


>ref|XP_002324515.1| predicted protein [Populus trichocarpa] gi|222865949|gb|EEF03080.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  530 bits (1364), Expect = e-148
 Identities = 253/298 (84%), Positives = 278/298 (93%)
 Frame = +1

Query: 1   GHKGLVGSAIVKKLSESGYTNLLLRTHSELDLTRQAQVEKFFSTHKPNYVILAAAKVGGI 180
           GH+GLVGSAIV+KL   G TNL+LR+HSELDLTRQ+ V+ FF+  KP YVILAAAKVGGI
Sbjct: 23  GHRGLVGSAIVRKLQSHGLTNLVLRSHSELDLTRQSDVDSFFAAEKPQYVILAAAKVGGI 82

Query: 181 HANNTYPAEFISINLQIQTNVIHSAYTNEVKKILFLGSSCIYPKYAPQPIKEDALLTGPL 360
           HANNTYPA+FI+INLQIQTNVI S++ + VKK+LFLGSSCIYPK APQPI E+ALLTGPL
Sbjct: 83  HANNTYPADFIAINLQIQTNVIDSSFRHGVKKLLFLGSSCIYPKLAPQPIPENALLTGPL 142

Query: 361 EQTNEWYAIAKIAGIKMCQAYRLQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 540
           E TNEWYAIAKI+GIKMCQAYR+QYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH
Sbjct: 143 EPTNEWYAIAKISGIKMCQAYRIQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 202

Query: 541 EAKVGNAKEVVVWGSGSPLREFLHVDDLADAVVFLMDKYSGLEHVNIGSGKEVSIKELAE 720
           EAKV  AKEVVVWG+GSPLREFLHVDDLADAVVFLMDKYSGLEH+N+GSGKEV+IKELAE
Sbjct: 203 EAKVNKAKEVVVWGTGSPLREFLHVDDLADAVVFLMDKYSGLEHLNVGSGKEVTIKELAE 262

Query: 721 LVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWVPKISLRDGLVDTYKWYLEYV 894
           LVKE VGF+GELVWD+SKPDGTPRKLMDSSKL GLGW+PKISL+DGLVDTYKWY+E V
Sbjct: 263 LVKEAVGFEGELVWDTSKPDGTPRKLMDSSKLLGLGWMPKISLKDGLVDTYKWYVENV 320


>ref|XP_002523849.1| fucose synthetase, putative [Ricinus communis]
           gi|223536937|gb|EEF38575.1| fucose synthetase, putative
           [Ricinus communis]
          Length = 321

 Score =  526 bits (1355), Expect = e-147
 Identities = 249/298 (83%), Positives = 277/298 (92%)
 Frame = +1

Query: 1   GHKGLVGSAIVKKLSESGYTNLLLRTHSELDLTRQAQVEKFFSTHKPNYVILAAAKVGGI 180
           GH+GLVGSAIV+KL   G+TNL+LRTHSELDLTRQ+ V+ FF+  KP +VILAAAKVGGI
Sbjct: 21  GHRGLVGSAIVRKLHSLGFTNLVLRTHSELDLTRQSDVDSFFAVEKPKFVILAAAKVGGI 80

Query: 181 HANNTYPAEFISINLQIQTNVIHSAYTNEVKKILFLGSSCIYPKYAPQPIKEDALLTGPL 360
           HANNTYPA+FI++NLQIQTNVI S+Y + VKK+LFLGSSCIYPK APQPI E+ALLTGPL
Sbjct: 81  HANNTYPADFIAVNLQIQTNVIDSSYRHGVKKLLFLGSSCIYPKLAPQPIPENALLTGPL 140

Query: 361 EQTNEWYAIAKIAGIKMCQAYRLQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 540
           E TNEWYA+AKIAGIKMCQAYR+QYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH
Sbjct: 141 EPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 200

Query: 541 EAKVGNAKEVVVWGSGSPLREFLHVDDLADAVVFLMDKYSGLEHVNIGSGKEVSIKELAE 720
           EAK   AKEVVVWG+GSPLREFLHVDDLADAVVFLM++YSG+EHVN+GSGKEV+IKELAE
Sbjct: 201 EAKANGAKEVVVWGTGSPLREFLHVDDLADAVVFLMERYSGIEHVNVGSGKEVTIKELAE 260

Query: 721 LVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWVPKISLRDGLVDTYKWYLEYV 894
            ++EVVGFQG+LVWDSSKPDGTPRKLMDSSKL GLGW PK+SL+DGLVDTYKWYLE V
Sbjct: 261 QMREVVGFQGQLVWDSSKPDGTPRKLMDSSKLLGLGWSPKVSLKDGLVDTYKWYLENV 318


>ref|XP_004170092.1| PREDICTED: putative GDP-L-fucose synthase 2-like [Cucumis sativus]
          Length = 325

 Score =  525 bits (1353), Expect = e-147
 Identities = 252/300 (84%), Positives = 278/300 (92%)
 Frame = +1

Query: 1   GHKGLVGSAIVKKLSESGYTNLLLRTHSELDLTRQAQVEKFFSTHKPNYVILAAAKVGGI 180
           GH+GLVGSAIV+KL + G+TNL+LR+HSELDLTRQ+ VE FF+  KP +VILAAAKVGGI
Sbjct: 26  GHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQSDVESFFANEKPRFVILAAAKVGGI 85

Query: 181 HANNTYPAEFISINLQIQTNVIHSAYTNEVKKILFLGSSCIYPKYAPQPIKEDALLTGPL 360
           HANNTYPA+FI+INLQIQTNVI SAY   V+K+LFLGSSCIYPK+APQPI EDALLTGPL
Sbjct: 86  HANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLFLGSSCIYPKFAPQPIPEDALLTGPL 145

Query: 361 EQTNEWYAIAKIAGIKMCQAYRLQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 540
           E TNEWYA+AKIAGIKMCQAYR+QY WDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH
Sbjct: 146 EPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 205

Query: 541 EAKVGNAKEVVVWGSGSPLREFLHVDDLADAVVFLMDKYSGLEHVNIGSGKEVSIKELAE 720
           EAKV  AKEVVVWGSGSPLREFLHVDDLADAVVFLM++YS L H+N+GSGKEVSIKELAE
Sbjct: 206 EAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSDLGHLNVGSGKEVSIKELAE 265

Query: 721 LVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWVPKISLRDGLVDTYKWYLEYVKQ 900
           LVKEVVGF+G+LVWD SKPDGTPRKLMDSSKLA LGW PKISL+DGLVDTYKWY++ V+Q
Sbjct: 266 LVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWSPKISLKDGLVDTYKWYVQNVQQ 325


>ref|XP_004144717.1| PREDICTED: putative GDP-L-fucose synthase 2-like [Cucumis sativus]
          Length = 325

 Score =  525 bits (1352), Expect = e-146
 Identities = 252/300 (84%), Positives = 278/300 (92%)
 Frame = +1

Query: 1   GHKGLVGSAIVKKLSESGYTNLLLRTHSELDLTRQAQVEKFFSTHKPNYVILAAAKVGGI 180
           GH+GLVGSAIV+KL + G+TNL+LR+HSELDLTRQ+ VE FF+  KP +VILAAAKVGGI
Sbjct: 26  GHRGLVGSAIVRKLQQLGFTNLILRSHSELDLTRQSDVESFFANEKPRFVILAAAKVGGI 85

Query: 181 HANNTYPAEFISINLQIQTNVIHSAYTNEVKKILFLGSSCIYPKYAPQPIKEDALLTGPL 360
           HANNTYPA+FI+INLQIQTNVI SAY   V+K+LFLGSSCIYPK+APQPI EDALLTGPL
Sbjct: 86  HANNTYPADFIAINLQIQTNVIDSAYRYGVEKLLFLGSSCIYPKFAPQPIPEDALLTGPL 145

Query: 361 EQTNEWYAIAKIAGIKMCQAYRLQYNWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 540
           E TNEWYA+AKIAGIKMCQAYR+QY WDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH
Sbjct: 146 EPTNEWYAVAKIAGIKMCQAYRIQYKWDAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 205

Query: 541 EAKVGNAKEVVVWGSGSPLREFLHVDDLADAVVFLMDKYSGLEHVNIGSGKEVSIKELAE 720
           EAKV  AKEVVVWGSGSPLREFLHVDDLADAVVFLM++YS L H+N+GSGKEVSIKELAE
Sbjct: 206 EAKVKGAKEVVVWGSGSPLREFLHVDDLADAVVFLMEEYSDLGHLNVGSGKEVSIKELAE 265

Query: 721 LVKEVVGFQGELVWDSSKPDGTPRKLMDSSKLAGLGWVPKISLRDGLVDTYKWYLEYVKQ 900
           LVKEVVGF+G+LVWD SKPDGTPRKLMDSSKLA LGW PKISL+DGLVDTYKWY++ V+Q
Sbjct: 266 LVKEVVGFEGDLVWDKSKPDGTPRKLMDSSKLAELGWNPKISLKDGLVDTYKWYVQNVQQ 325


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