BLASTX nr result

ID: Coptis25_contig00006887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006887
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN74942.1| putative 1-aminocyclopropane-1-carboxylate deamin...   211   1e-52
gb|ACN36628.1| unknown [Zea mays]                                     204   2e-50
gb|ACL52405.1| unknown [Zea mays]                                     204   2e-50
ref|NP_001130254.1| hypothetical protein [Zea mays] gi|194688676...   203   2e-50
ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersic...   202   5e-50

>gb|AAN74942.1| putative 1-aminocyclopropane-1-carboxylate deaminase [Betula
           pendula]
          Length = 229

 Score =  211 bits (536), Expect = 1e-52
 Identities = 102/147 (69%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
 Frame = +2

Query: 218 KILVDSDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPV 397
           K+LVD DPGLTGNLLVERLVGAH+DL+SKEEYA  GSE LTNLLKE+L+ EG+RPYVIPV
Sbjct: 49  KVLVDQDPGLTGNLLVERLVGAHIDLISKEEYAKIGSESLTNLLKEKLLNEGRRPYVIPV 108

Query: 398 GGSNSLGTWGYIEAVREIEEQLHVAP-SIEFQDIVVACGSGGTVXXXXXXXXXXXXXXXI 574
           GGSNSLGTWGYIEA+REIE+QL      I+F DIVVACGSGGT+               +
Sbjct: 109 GGSNSLGTWGYIEAIREIEQQLQTGTGEIKFDDIVVACGSGGTIAGLSLGSWLSTLKAKV 168

Query: 575 HGFSVCDDPDYFYKYVQGLFYGLNAGV 655
           H FSVCDDPDYFY ++QGL  GL AGV
Sbjct: 169 HAFSVCDDPDYFYDFIQGLLNGLEAGV 195


>gb|ACN36628.1| unknown [Zea mays]
          Length = 373

 Score =  204 bits (518), Expect = 2e-50
 Identities = 96/146 (65%), Positives = 113/146 (77%)
 Frame = +2

Query: 218 KILVDSDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPV 397
           K+LVD DPGL GNLLVERLVGAHVDLVSKEEY   GS  L +LLK+RL+ EG++PYVIPV
Sbjct: 118 KLLVDKDPGLVGNLLVERLVGAHVDLVSKEEYGKIGSVALADLLKKRLLEEGRKPYVIPV 177

Query: 398 GGSNSLGTWGYIEAVREIEEQLHVAPSIEFQDIVVACGSGGTVXXXXXXXXXXXXXXXIH 577
           GGSNSLGTWGYIEA+REIE+Q+  +  ++F DIVVACGSGGT+               +H
Sbjct: 178 GGSNSLGTWGYIEAIREIEQQIQQSADVQFDDIVVACGSGGTIAGLALGSRLSSLNTKVH 237

Query: 578 GFSVCDDPDYFYKYVQGLFYGLNAGV 655
            FSVCDDP+YFY YVQGL  GLN+G+
Sbjct: 238 AFSVCDDPEYFYDYVQGLIDGLNSGL 263


>gb|ACL52405.1| unknown [Zea mays]
          Length = 395

 Score =  204 bits (518), Expect = 2e-50
 Identities = 96/146 (65%), Positives = 113/146 (77%)
 Frame = +2

Query: 218 KILVDSDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPV 397
           K+LVD DPGL GNLLVERLVGAHVDLVSKEEY   GS  L +LLK+RL+ EG++PYVIPV
Sbjct: 140 KLLVDKDPGLVGNLLVERLVGAHVDLVSKEEYGKIGSVALADLLKKRLLEEGRKPYVIPV 199

Query: 398 GGSNSLGTWGYIEAVREIEEQLHVAPSIEFQDIVVACGSGGTVXXXXXXXXXXXXXXXIH 577
           GGSNSLGTWGYIEA+REIE+Q+  +  ++F DIVVACGSGGT+               +H
Sbjct: 200 GGSNSLGTWGYIEAIREIEQQIQQSADVQFDDIVVACGSGGTIAGLALGSRLSSLNTKVH 259

Query: 578 GFSVCDDPDYFYKYVQGLFYGLNAGV 655
            FSVCDDP+YFY YVQGL  GLN+G+
Sbjct: 260 AFSVCDDPEYFYDYVQGLIDGLNSGL 285


>ref|NP_001130254.1| hypothetical protein [Zea mays] gi|194688676|gb|ACF78422.1| unknown
           [Zea mays] gi|413939136|gb|AFW73687.1| hypothetical
           protein ZEAMMB73_104591 [Zea mays]
          Length = 395

 Score =  203 bits (517), Expect = 2e-50
 Identities = 96/145 (66%), Positives = 112/145 (77%)
 Frame = +2

Query: 218 KILVDSDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPV 397
           K+LVD DPGL GNLLVERLVGAHVDLVSKEEY   GS  L +LLK+RL+ EG++PYVIPV
Sbjct: 140 KLLVDKDPGLVGNLLVERLVGAHVDLVSKEEYGKIGSVALADLLKKRLLEEGRKPYVIPV 199

Query: 398 GGSNSLGTWGYIEAVREIEEQLHVAPSIEFQDIVVACGSGGTVXXXXXXXXXXXXXXXIH 577
           GGSNSLGTWGYIEA+REIE+Q+  +  ++F DIVVACGSGGT+               +H
Sbjct: 200 GGSNSLGTWGYIEAIREIEQQIQQSSDVQFDDIVVACGSGGTIAGLALGSRLSSLNTKVH 259

Query: 578 GFSVCDDPDYFYKYVQGLFYGLNAG 652
            FSVCDDP+YFY YVQGL  GLN+G
Sbjct: 260 AFSVCDDPEYFYDYVQGLIDGLNSG 284


>ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersicum]
           gi|186920269|gb|ACC95419.1| D-cysteine desulfhydrase
           [Solanum lycopersicum]
          Length = 425

 Score =  202 bits (514), Expect = 5e-50
 Identities = 98/147 (66%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
 Frame = +2

Query: 218 KILVDSDPGLTGNLLVERLVGAHVDLVSKEEYANTGSEVLTNLLKERLIREGKRPYVIPV 397
           K+LVD DPGLTGNLLV+RLVGAH+DLVSKEEYA  G E LT +LKE+L+ EG++PYVIPV
Sbjct: 169 KLLVDKDPGLTGNLLVDRLVGAHIDLVSKEEYAKVGGEALTKILKEKLLNEGRKPYVIPV 228

Query: 398 GGSNSLGTWGYIEAVREIEEQL-HVAPSIEFQDIVVACGSGGTVXXXXXXXXXXXXXXXI 574
           GGSNSLGTWGYIEA+RE+E+QL H++   +F DIVVACGSGGTV               I
Sbjct: 229 GGSNSLGTWGYIEAIRELEQQLQHLSIEQKFDDIVVACGSGGTVAGLSIASMLSGLKAKI 288

Query: 575 HGFSVCDDPDYFYKYVQGLFYGLNAGV 655
           + F VCDDPDYFY+YVQGL  G+ AGV
Sbjct: 289 NAFCVCDDPDYFYEYVQGLLDGITAGV 315


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