BLASTX nr result
ID: Coptis25_contig00006884
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006884 (341 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23512.3| unnamed protein product [Vitis vinifera] 82 3e-14 emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera] 82 3e-14 ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephal... 77 1e-12 ref|XP_003529901.1| PREDICTED: uncharacterized protein LOC100800... 67 2e-09 ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate... 65 4e-09 >emb|CBI23512.3| unnamed protein product [Vitis vinifera] Length = 943 Score = 82.4 bits (202), Expect = 3e-14 Identities = 43/74 (58%), Positives = 51/74 (68%), Gaps = 5/74 (6%) Frame = -2 Query: 337 KIVNFASLMDGKAMWCLIDYYFRHELPCSSFC-----KAVKIQIFGLLIDCSDAVHNLIL 173 KI NFASL+DGKAMWCL+DYYFR EL CS + K I DC+DA HN IL Sbjct: 568 KIENFASLVDGKAMWCLLDYYFRKELHCSRSYNDPNERNGKKSIIS-ATDCTDAAHNFIL 626 Query: 172 SQKLITMLGSFPKI 131 SQKL T+LG+FP++ Sbjct: 627 SQKLTTLLGNFPEV 640 >emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera] Length = 1251 Score = 82.4 bits (202), Expect = 3e-14 Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 4/73 (5%) Frame = -2 Query: 337 KIVNFASLMDGKAMWCLIDYYFRHELPCS-SFCKAVKIQIFGLLI---DCSDAVHNLILS 170 KI NFASL+DGKAMWCL+DYYFR EL CS S+ + +I DC+DA HN ILS Sbjct: 569 KIENFASLVDGKAMWCLLDYYFRKELHCSRSYNDPNERNGXKSIISATDCTDAAHNFILS 628 Query: 169 QKLITMLGSFPKI 131 QKL T+LG+FP++ Sbjct: 629 QKLTTLLGNFPEV 641 >ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephaly-associated protein homolog [Cucumis sativus] Length = 1368 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 2/72 (2%) Frame = -2 Query: 340 IKIVNFASLMDGKAMWCLIDYYFRHELPC--SSFCKAVKIQIFGLLIDCSDAVHNLILSQ 167 IKI +F+SL+DGKA+WCL+DYYFR +L C SS K + + CSDA HN IL Q Sbjct: 567 IKISSFSSLVDGKAIWCLLDYYFRKDLHCSISSKVKTNGEESIMSVTHCSDAAHNFILLQ 626 Query: 166 KLITMLGSFPKI 131 KL ++LG FP+I Sbjct: 627 KLASLLGDFPEI 638 >ref|XP_003529901.1| PREDICTED: uncharacterized protein LOC100800871 [Glycine max] Length = 883 Score = 66.6 bits (161), Expect = 2e-09 Identities = 28/38 (73%), Positives = 32/38 (84%) Frame = -1 Query: 134 DKCWAGIYLLGVTCQECSTGRFFDSYFVWFQKLLPLIQ 21 DKCWAGI LLGVTC+ECS+ RF +SY VWFQKLL +Q Sbjct: 91 DKCWAGISLLGVTCEECSSERFLESYSVWFQKLLSFLQ 128 >ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein [Medicago truncatula] gi|355511469|gb|AES92611.1| Abnormal spindle-like microcephaly-associated protein-like protein [Medicago truncatula] Length = 1503 Score = 65.5 bits (158), Expect = 4e-09 Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 5/71 (7%) Frame = -2 Query: 328 NFASLMDGKAMWCLIDYYFRHEL--PCS---SFCKAVKIQIFGLLIDCSDAVHNLILSQK 164 NF SL+DGKA+WCL+D+YF+ EL CS + K+ K I + + SDA++N ILSQK Sbjct: 578 NFHSLVDGKAIWCLLDHYFQKELHNVCSLKEFYEKSGKTSIMS-VNEYSDALYNFILSQK 636 Query: 163 LITMLGSFPKI 131 L T+LG+FP++ Sbjct: 637 LTTLLGNFPEV 647