BLASTX nr result

ID: Coptis25_contig00006884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006884
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23512.3| unnamed protein product [Vitis vinifera]               82   3e-14
emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]    82   3e-14
ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephal...    77   1e-12
ref|XP_003529901.1| PREDICTED: uncharacterized protein LOC100800...    67   2e-09
ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate...    65   4e-09

>emb|CBI23512.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/74 (58%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
 Frame = -2

Query: 337 KIVNFASLMDGKAMWCLIDYYFRHELPCSSFC-----KAVKIQIFGLLIDCSDAVHNLIL 173
           KI NFASL+DGKAMWCL+DYYFR EL CS        +  K  I     DC+DA HN IL
Sbjct: 568 KIENFASLVDGKAMWCLLDYYFRKELHCSRSYNDPNERNGKKSIIS-ATDCTDAAHNFIL 626

Query: 172 SQKLITMLGSFPKI 131
           SQKL T+LG+FP++
Sbjct: 627 SQKLTTLLGNFPEV 640


>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 4/73 (5%)
 Frame = -2

Query: 337 KIVNFASLMDGKAMWCLIDYYFRHELPCS-SFCKAVKIQIFGLLI---DCSDAVHNLILS 170
           KI NFASL+DGKAMWCL+DYYFR EL CS S+    +      +I   DC+DA HN ILS
Sbjct: 569 KIENFASLVDGKAMWCLLDYYFRKELHCSRSYNDPNERNGXKSIISATDCTDAAHNFILS 628

Query: 169 QKLITMLGSFPKI 131
           QKL T+LG+FP++
Sbjct: 629 QKLTTLLGNFPEV 641


>ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
           homolog [Cucumis sativus]
          Length = 1368

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
 Frame = -2

Query: 340 IKIVNFASLMDGKAMWCLIDYYFRHELPC--SSFCKAVKIQIFGLLIDCSDAVHNLILSQ 167
           IKI +F+SL+DGKA+WCL+DYYFR +L C  SS  K    +    +  CSDA HN IL Q
Sbjct: 567 IKISSFSSLVDGKAIWCLLDYYFRKDLHCSISSKVKTNGEESIMSVTHCSDAAHNFILLQ 626

Query: 166 KLITMLGSFPKI 131
           KL ++LG FP+I
Sbjct: 627 KLASLLGDFPEI 638


>ref|XP_003529901.1| PREDICTED: uncharacterized protein LOC100800871 [Glycine max]
          Length = 883

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -1

Query: 134 DKCWAGIYLLGVTCQECSTGRFFDSYFVWFQKLLPLIQ 21
           DKCWAGI LLGVTC+ECS+ RF +SY VWFQKLL  +Q
Sbjct: 91  DKCWAGISLLGVTCEECSSERFLESYSVWFQKLLSFLQ 128


>ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein
           [Medicago truncatula] gi|355511469|gb|AES92611.1|
           Abnormal spindle-like microcephaly-associated
           protein-like protein [Medicago truncatula]
          Length = 1503

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
 Frame = -2

Query: 328 NFASLMDGKAMWCLIDYYFRHEL--PCS---SFCKAVKIQIFGLLIDCSDAVHNLILSQK 164
           NF SL+DGKA+WCL+D+YF+ EL   CS    + K+ K  I   + + SDA++N ILSQK
Sbjct: 578 NFHSLVDGKAIWCLLDHYFQKELHNVCSLKEFYEKSGKTSIMS-VNEYSDALYNFILSQK 636

Query: 163 LITMLGSFPKI 131
           L T+LG+FP++
Sbjct: 637 LTTLLGNFPEV 647


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