BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006880
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase...   313   1e-83
ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase...   303   8e-81
ref|XP_004135891.1| PREDICTED: ribulose bisphosphate carboxylase...   303   8e-81
ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|2...   303   1e-80
ref|XP_003543716.1| PREDICTED: ribulose bisphosphate carboxylase...   302   2e-80

>ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Vitis vinifera]
          Length = 442

 Score =  313 bits (801), Expect = 1e-83
 Identities = 152/173 (87%), Positives = 161/173 (93%)
 Frame = +2

Query: 5   SASDEKRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNFLGR 184
           SA  E   ++ISEQSSWEAKD+EG DYLYRLGKEADNMNI+VGA+ G+ID LFVGNFLGR
Sbjct: 64  SAGGEAGQRRISEQSSWEAKDSEGRDYLYRLGKEADNMNIAVGARAGIIDDLFVGNFLGR 123

Query: 185 DADIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIWGGK 364
           D+DIVFDYRQKVTRSFEYLQGDYYIAP FMDKVVCHIVKNYI HLLN  VPLILGIWGGK
Sbjct: 124 DSDIVFDYRQKVTRSFEYLQGDYYIAPVFMDKVVCHIVKNYIAHLLNTNVPLILGIWGGK 183

Query: 365 GQGKSFQTELIFQAMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 523
           GQGKSFQTELIFQAMG+EPVIMSAGELES+RAGEPGKLIRERYRTASQVVQNQ
Sbjct: 184 GQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQ 236


>ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Cucumis sativus]
          Length = 427

 Score =  303 bits (777), Expect = 8e-81
 Identities = 144/168 (85%), Positives = 160/168 (95%)
 Frame = +2

Query: 20  KRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNFLGRDADIV 199
           KR K++SEQSSWEAKD+EG DYLYRLG EADNMNI+VGA+ GVID +F GNFLG+D+DIV
Sbjct: 53  KRPKRLSEQSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDVFAGNFLGKDSDIV 112

Query: 200 FDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIWGGKGQGKS 379
           FDYRQKVTR+FE++QGDYYIAP FMDKVVCH+VKN+I HLL+VKVPLILG+WGGKGQGKS
Sbjct: 113 FDYRQKVTRTFEHIQGDYYIAPTFMDKVVCHLVKNFIVHLLDVKVPLILGVWGGKGQGKS 172

Query: 380 FQTELIFQAMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 523
           FQTELIFQAMGVEPVIMSAGELES+RAGEPGKLIRERYRTASQVVQNQ
Sbjct: 173 FQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQ 220


>ref|XP_004135891.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Cucumis sativus]
          Length = 426

 Score =  303 bits (777), Expect = 8e-81
 Identities = 144/168 (85%), Positives = 160/168 (95%)
 Frame = +2

Query: 20  KRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNFLGRDADIV 199
           KR K++SEQSSWEAKD+EG DYLYRLG EADNMNI+VGA+ GVID +F GNFLG+D+DIV
Sbjct: 53  KRPKRLSEQSSWEAKDSEGKDYLYRLGSEADNMNIAVGARAGVIDDVFAGNFLGKDSDIV 112

Query: 200 FDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIWGGKGQGKS 379
           FDYRQKVTR+FE++QGDYYIAP FMDKVVCH+VKN+I HLL+VKVPLILG+WGGKGQGKS
Sbjct: 113 FDYRQKVTRTFEHIQGDYYIAPTFMDKVVCHLVKNFIVHLLDVKVPLILGVWGGKGQGKS 172

Query: 380 FQTELIFQAMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 523
           FQTELIFQAMGVEPVIMSAGELES+RAGEPGKLIRERYRTASQVVQNQ
Sbjct: 173 FQTELIFQAMGVEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQ 220


>ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|222846423|gb|EEE83970.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  303 bits (775), Expect = 1e-80
 Identities = 143/173 (82%), Positives = 162/173 (93%)
 Frame = +2

Query: 5   SASDEKRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNFLGR 184
           ++ +E+  +++S+QSSWEAKD+EG DYLYRLGKEADNMNI+VGA+ GV+D LF GNFLG+
Sbjct: 50  NSENEEPKRRLSQQSSWEAKDSEGKDYLYRLGKEADNMNIAVGARAGVVDSLFAGNFLGK 109

Query: 185 DADIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIWGGK 364
           D+DIVFDYRQKVTRSFEYLQGDYYIAP F+DKVVCHIVKNY+ H LNVKVPLILGIWGGK
Sbjct: 110 DSDIVFDYRQKVTRSFEYLQGDYYIAPLFLDKVVCHIVKNYLAHRLNVKVPLILGIWGGK 169

Query: 365 GQGKSFQTELIFQAMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 523
           GQGKSFQTELIFQ +GVEPVIMSAGELES+RAGEPG+LIRERYRTASQVVQNQ
Sbjct: 170 GQGKSFQTELIFQTLGVEPVIMSAGELESERAGEPGRLIRERYRTASQVVQNQ 222


>ref|XP_003543716.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Glycine max]
          Length = 428

 Score =  302 bits (774), Expect = 2e-80
 Identities = 144/169 (85%), Positives = 159/169 (94%)
 Frame = +2

Query: 17  EKRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNFLGRDADI 196
           +K+ K++S+QSSWEA+DAEG DYLYRLGKEADNMNI+VG + GVID LF GNFLG+D+DI
Sbjct: 54  KKKEKRLSQQSSWEAQDAEGRDYLYRLGKEADNMNIAVGQRAGVIDSLFAGNFLGKDSDI 113

Query: 197 VFDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIWGGKGQGK 376
           VFDYRQKVTRSF+YLQGDYYIAP FMDKVVCHIVKNY+  +LN KVPLILGIWGGKGQGK
Sbjct: 114 VFDYRQKVTRSFQYLQGDYYIAPLFMDKVVCHIVKNYLARVLNTKVPLILGIWGGKGQGK 173

Query: 377 SFQTELIFQAMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 523
           SFQTELIFQAMG+EPVIMSAGELES+RAGEPGKLIRERYRTASQVVQNQ
Sbjct: 174 SFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQ 222