BLASTX nr result

ID: Coptis25_contig00006877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006877
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ86881.1| predicted protein [Hordeum vulgare subsp. vulgare]    324   2e-86
ref|XP_003574257.1| PREDICTED: SUMO-conjugating enzyme SCE1-like...   319   4e-85
emb|CAN61018.1| hypothetical protein VITISV_001138 [Vitis vinifera]   318   1e-84
ref|NP_001048802.1| Os03g0123100 [Oryza sativa Japonica Group] g...   317   2e-84
ref|NP_001150102.1| ubiquitin-conjugating enzyme E2 I [Zea mays]...   315   6e-84

>dbj|BAJ86881.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 161

 Score =  324 bits (830), Expect = 2e-86
 Identities = 147/161 (91%), Positives = 154/161 (95%)
 Frame = +3

Query: 120 MSGGGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCY 299
           MSGGGIARGRLAEERKAWRKNHPHGFVAKPET ADGSVNLMIW CTIPGK GTDWE G Y
Sbjct: 1   MSGGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSVNLMIWNCTIPGKQGTDWESGYY 60

Query: 300 PLTLHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 479
           PLTLHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 61  PLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 120

Query: 480 LLDQPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 602
           LLDQPNPADPAQTDGYHLFIQ+P EYR+R++ QAKQYP++V
Sbjct: 121 LLDQPNPADPAQTDGYHLFIQDPAEYRRRIRLQAKQYPALV 161


>ref|XP_003574257.1| PREDICTED: SUMO-conjugating enzyme SCE1-like isoform 1
           [Brachypodium distachyon]
          Length = 161

 Score =  319 bits (818), Expect = 4e-85
 Identities = 144/161 (89%), Positives = 153/161 (95%)
 Frame = +3

Query: 120 MSGGGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCY 299
           MSGGGIARGRLAEERKAWRKNHPHGFVAKPET ADGSVNLM+W CTIPGK GTDWEGG +
Sbjct: 1   MSGGGIARGRLAEERKAWRKNHPHGFVAKPETVADGSVNLMVWHCTIPGKQGTDWEGGYF 60

Query: 300 PLTLHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 479
           PLTL FSEDYPSKPPKC+FPQ FFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 61  PLTLQFSEDYPSKPPKCKFPQNFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 120

Query: 480 LLDQPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 602
           LLDQPNPADPAQTDGYHLFIQ+P EY+KRV+ QAKQYP+++
Sbjct: 121 LLDQPNPADPAQTDGYHLFIQDPAEYKKRVRLQAKQYPALI 161


>emb|CAN61018.1| hypothetical protein VITISV_001138 [Vitis vinifera]
          Length = 160

 Score =  318 bits (815), Expect = 1e-84
 Identities = 144/158 (91%), Positives = 151/158 (95%)
 Frame = +3

Query: 129 GGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCYPLT 308
           GGIARGRLAEERKAWRKNHPHGFVAKPET  DGSVNLM+W CTIPGKAGTDWEGG +PLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPETGPDGSVNLMVWHCTIPGKAGTDWEGGYFPLT 62

Query: 309 LHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 488
           LHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122

Query: 489 QPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 602
           QPNPADPAQTDGY LFIQEP EY++RV+QQAKQYP +V
Sbjct: 123 QPNPADPAQTDGYQLFIQEPAEYKRRVRQQAKQYPPLV 160


>ref|NP_001048802.1| Os03g0123100 [Oryza sativa Japonica Group]
           gi|25446690|gb|AAN74837.1| Putative
           ubiquitin-conjugating enzyme [Oryza sativa Japonica
           Group] gi|108705922|gb|ABF93717.1| Ubiquitin-conjugating
           enzyme E2 I, putative, expressed [Oryza sativa Japonica
           Group] gi|113547273|dbj|BAF10716.1| Os03g0123100 [Oryza
           sativa Japonica Group] gi|125542190|gb|EAY88329.1|
           hypothetical protein OsI_09788 [Oryza sativa Indica
           Group] gi|125584745|gb|EAZ25409.1| hypothetical protein
           OsJ_09225 [Oryza sativa Japonica Group]
           gi|215692765|dbj|BAG88233.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215734816|dbj|BAG95538.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 160

 Score =  317 bits (812), Expect = 2e-84
 Identities = 144/158 (91%), Positives = 151/158 (95%)
 Frame = +3

Query: 129 GGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCYPLT 308
           GGIARGRLAEERKAWRKNHPHGFVAKPET ADG+VNLMIW CTIPGK GTDWEGG +PLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLT 62

Query: 309 LHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 488
           LHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122

Query: 489 QPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 602
           QPNPADPAQTDGYHLFIQ+P EY++RV+ QAKQYP IV
Sbjct: 123 QPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160


>ref|NP_001150102.1| ubiquitin-conjugating enzyme E2 I [Zea mays]
           gi|195605910|gb|ACG24785.1| ubiquitin-conjugating enzyme
           E2 I [Zea mays] gi|195636744|gb|ACG37840.1|
           ubiquitin-conjugating enzyme E2 I [Zea mays]
           gi|414864465|tpg|DAA43022.1| TPA: putative
           ubiquitin-conjugating enzyme family [Zea mays]
          Length = 160

 Score =  315 bits (808), Expect = 6e-84
 Identities = 142/158 (89%), Positives = 152/158 (96%)
 Frame = +3

Query: 129 GGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCYPLT 308
           GGIARGRLAEERKAWRKNHPHGFVAKPE+  DG+VNLMIWQCTIPGK GTDWEGG +PLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPESLPDGTVNLMIWQCTIPGKQGTDWEGGYFPLT 62

Query: 309 LHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 488
           LHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLD 122

Query: 489 QPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 602
           QPNPADPAQTDGYHLFIQ+P EY++RV+ QAKQYP++V
Sbjct: 123 QPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPALV 160


Top