BLASTX nr result

ID: Coptis25_contig00006873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006873
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20978.3| unnamed protein product [Vitis vinifera]              120   2e-25
emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]   120   2e-25
gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]     119   3e-25
gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axill...   119   3e-25
gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuber...   119   3e-25

>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
          Length = 1436

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/74 (81%), Positives = 68/74 (91%)
 Frame = +2

Query: 338 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 517
           V  AKALFMDEISTGLD STTFQIVN++RQ+IHIL+GT +ISLLQPA ET DLF++IIL+
Sbjct: 338 VGPAKALFMDEISTGLDSSTTFQIVNSIRQSIHILKGTAIISLLQPAPETYDLFDDIILL 397

Query: 518 SDGQIVYQGPRENV 559
           SDGQIVYQGPRENV
Sbjct: 398 SDGQIVYQGPRENV 411



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = +1

Query: 190 RILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 348
           +ILGL+VCADT+V ++M+RGISGGQ +R+T GEML G AKALFM EIS GLDS
Sbjct: 303 KILGLEVCADTIVGDEMVRGISGGQKRRLTTGEMLVGPAKALFMDEISTGLDS 355


>emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]
          Length = 1441

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/74 (81%), Positives = 68/74 (91%)
 Frame = +2

Query: 338 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 517
           V  AKALFMDEISTGLD STTFQIVN++RQ+IHIL+GT +ISLLQPA ET DLF++IIL+
Sbjct: 338 VGPAKALFMDEISTGLDSSTTFQIVNSIRQSIHILKGTAIISLLQPAPETYDLFDDIILL 397

Query: 518 SDGQIVYQGPRENV 559
           SDGQIVYQGPRENV
Sbjct: 398 SDGQIVYQGPRENV 411



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/53 (69%), Positives = 45/53 (84%)
 Frame = +1

Query: 190 RILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 348
           +ILGL+ CADT+V ++M+RGISGGQ +R+T GEML G AKALFM EIS GLDS
Sbjct: 303 KILGLEXCADTIVGDEMVRGISGGQKRRLTTGEMLVGPAKALFMDEISTGLDS 355


>gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]
          Length = 1452

 Score =  119 bits (299), Expect = 3e-25
 Identities = 60/74 (81%), Positives = 68/74 (91%)
 Frame = +2

Query: 338 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 517
           V  A+ALFMDEISTGLD STT+QIVN++RQ+IHILQGT VISLLQPA ET DLF++IIL+
Sbjct: 339 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 398

Query: 518 SDGQIVYQGPRENV 559
           SDGQIVYQGPRENV
Sbjct: 399 SDGQIVYQGPRENV 412



 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 36/53 (67%), Positives = 46/53 (86%)
 Frame = +1

Query: 190 RILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 348
           +ILGL++CADT+V ++M+RGISGGQ KR+T GEM+ G A+ALFM EIS GLDS
Sbjct: 304 KILGLEICADTIVGDEMVRGISGGQRKRLTTGEMMVGPARALFMDEISTGLDS 356


>gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axillaris]
          Length = 1452

 Score =  119 bits (299), Expect = 3e-25
 Identities = 60/74 (81%), Positives = 68/74 (91%)
 Frame = +2

Query: 338 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 517
           V  A+ALFMDEISTGLD STT+QIVN++RQ+IHILQGT VISLLQPA ET DLF++IIL+
Sbjct: 339 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 398

Query: 518 SDGQIVYQGPRENV 559
           SDGQIVYQGPRENV
Sbjct: 399 SDGQIVYQGPRENV 412



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = +1

Query: 190 RILGLDVCADTLVENDMLRGISGGQMKRVTIGEMLAGAAKALFMSEISIGLDS 348
           +ILGL++CADT+V ++M+ GISGGQ KR+T GEM+ G A+ALFM EIS GLDS
Sbjct: 304 KILGLEICADTIVGDEMIPGISGGQRKRLTTGEMMVGPARALFMDEISTGLDS 356


>gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuberosum]
          Length = 1423

 Score =  119 bits (299), Expect = 3e-25
 Identities = 60/74 (81%), Positives = 68/74 (91%)
 Frame = +2

Query: 338 VWTAKALFMDEISTGLDRSTTFQIVNALRQTIHILQGTGVISLLQPALETCDLFNEIILI 517
           V  A+ALFMDEISTGLD STT+QIVN++RQ+IHILQGT VISLLQPA ET DLF++IIL+
Sbjct: 493 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 552

Query: 518 SDGQIVYQGPRENV 559
           SDGQIVYQGPRENV
Sbjct: 553 SDGQIVYQGPRENV 566



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 7/60 (11%)
 Frame = +1

Query: 190 RILGLDVCADTLVENDMLRGISGGQMKRVTIG-------EMLAGAAKALFMSEISIGLDS 348
           +ILGL++CADTLV ++M+RGISGGQ KR+T G       EM+ G A+ALFM EIS GLDS
Sbjct: 451 KILGLEICADTLVGDEMIRGISGGQRKRLTTGLDKQKPWEMMVGPARALFMDEISTGLDS 510


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