BLASTX nr result
ID: Coptis25_contig00006872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006872
(1558 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|... 114 3e-64
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 243 1e-61
emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifo... 168 3e-39
ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago ... 124 2e-36
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi... 96 3e-34
>ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|AES92424.1| Ycf68
[Medicago truncatula]
Length = 501
Score = 114 bits (285), Expect(4) = 3e-64
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +1
Query: 340 VRRQIPGLNPGQAVETAKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 510
VRRQIPGLNPGQ V+T KLEYGRGRGNFRWSGEMRRDRKEHQ RKHSAGPTLTLRDE
Sbjct: 161 VRRQIPGLNPGQVVKTTKLEYGRGRGNFRWSGEMRRDRKEHQWRKHSAGPTLTLRDE 217
Score = 91.3 bits (225), Expect(4) = 3e-64
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 98 AQTPTGGSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRSNDGIWGISI 247
AQTPTGGSSGEFSAMGESLTEQCRVEV+GLRV+NFFS RR+NDGI GISI
Sbjct: 111 AQTPTGGSSGEFSAMGESLTEQCRVEVKGLRVMNFFSWRRNNDGIRGISI 160
Score = 55.1 bits (131), Expect(4) = 3e-64
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +2
Query: 734 LDMSRILLKERGAFGNADTGGAWLSSAR 817
LDM RILLKER AFGNADTGGAWLSSAR
Sbjct: 243 LDMPRILLKERSAFGNADTGGAWLSSAR 270
Score = 54.7 bits (130), Expect(4) = 3e-64
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3
Query: 618 VSRLGSTFARMKLKGIDGGPHKRWSM 695
+SRLGSTFARMKLKGIDGGPHKRW +
Sbjct: 218 ISRLGSTFARMKLKGIDGGPHKRWRL 243
Score = 79.7 bits (195), Expect(3) = 6e-31
Identities = 44/74 (59%), Positives = 44/74 (59%)
Frame = +3
Query: 1323 HTAVNSFPGLVHTARHXXXXXXXXXXXXXXXXXXXXXXXVHTARHTMGAGHARSRYLNRK 1502
HTAVNSFPGLVHTA RHTMGAGHARSRYLNRK
Sbjct: 316 HTAVNSFPGLVHTA-----------------------------RHTMGAGHARSRYLNRK 346
Query: 1503 GGDAEGRASDWSEV 1544
GDAEGRASDWSEV
Sbjct: 347 EGDAEGRASDWSEV 360
Score = 62.8 bits (151), Expect(3) = 6e-31
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +1
Query: 1156 KSSCPLCPGRHTCYNGRDKGSRSREGELT 1242
KSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 289 KSSCPLCPGRHTCYNGRDKGSRPREGDHT 317
Score = 40.0 bits (92), Expect(3) = 6e-31
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 1002 TAGDKPEEGEDDVKSSC 1052
TAGDKPEEGEDDVKSSC
Sbjct: 276 TAGDKPEEGEDDVKSSC 292
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 243 bits (620), Expect = 1e-61
Identities = 122/127 (96%), Positives = 123/127 (96%)
Frame = -2
Query: 633 SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF 454
SPGGILNALATALHGS RT PSIHRLRLGLLG LIPFAPLAFVSQCQCRPSRVLSPLVFF
Sbjct: 3 SPGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFF 62
Query: 453 PISAHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 274
PIS HFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL
Sbjct: 63 PISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 122
Query: 273 PRLLAQS 253
PRLLAQ+
Sbjct: 123 PRLLAQN 129
Score = 119 bits (297), Expect = 3e-24
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = -1
Query: 265 AGTELADAYSPDTVIASSPGKEVHDPQAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSV 86
A + L + +TVI SSP KEV DP AF+LHAALLRQAFAHCGKFPTAASRRSLGRVSV
Sbjct: 118 ASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSV 177
Query: 85 PVWLIILSDQLLIIALV 35
PVWLIILSDQLLIIALV
Sbjct: 178 PVWLIILSDQLLIIALV 194
>emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifolia]
Length = 84
Score = 168 bits (426), Expect = 3e-39
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = -2
Query: 636 YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 457
YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF
Sbjct: 2 YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 61
Query: 456 FPISAHFTAPPEIPSAPTVLQLG 388
FPIS HFTAPPEIPSAPTVLQLG
Sbjct: 62 FPISTHFTAPPEIPSAPTVLQLG 84
>ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago truncatula]
gi|355521959|gb|AET02413.1| hypothetical protein
MTR_8g040260 [Medicago truncatula]
Length = 241
Score = 124 bits (311), Expect(2) = 2e-36
Identities = 70/106 (66%), Positives = 73/106 (68%)
Frame = -1
Query: 568 YPSFTARTTGVSNPIRSPSFRLXXXXXXXXXAFAVGVLSDLCAFHRSTGNSLCPYRTPAW 389
YPSFTARTT VSNPIRSPSFRL AFA+GV SDL AFH STGNSL
Sbjct: 38 YPSFTARTTRVSNPIRSPSFRLSVLVSAQQSAFAIGVPSDLYAFHHSTGNSL-------- 89
Query: 388 QFPPPVQG*ALGFDGGLEKPPTDALRPIIPDNACILCLTAAAGTEL 251
+L FDG L+KPPTDALRPII DNACILCLTAAAGTEL
Sbjct: 90 ---------SLRFDGELKKPPTDALRPIISDNACILCLTAAAGTEL 126
Score = 56.2 bits (134), Expect(2) = 2e-36
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -3
Query: 146 RPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQT 3
RP HC + S V DHPLGP TDH LGKLLPHQLANQT
Sbjct: 134 RPFTSTRHCSIRLSRIAENSSLVDDHPLGPTTDHHLGKLLPHQLANQT 181
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = -2
Query: 816 RADDSHAPPVSAFPKAPLSFKRIRDMSSPGKVLRFASN*TTCSTACAGP 670
RADD+HAPPVS FPKA LSFKRI MSSPGKVLRF + T +T + P
Sbjct: 3 RADDNHAPPVSVFPKALLSFKRIHGMSSPGKVLRFYPSFTARTTRVSNP 51
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
jensenii 269-3]
Length = 174
Score = 95.9 bits (237), Expect(2) = 3e-34
Identities = 47/67 (70%), Positives = 54/67 (80%)
Frame = -1
Query: 217 SSPGKEVHDPQAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIAL 38
SSP E++DP+ F+ HAALL Q F HCG+FPTAASRRSLGRVSVP+W I LS +L IIAL
Sbjct: 108 SSPTTELYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIAL 167
Query: 37 VSYCLTN 17
VS LTN
Sbjct: 168 VSRYLTN 174
Score = 77.4 bits (189), Expect(2) = 3e-34
Identities = 43/87 (49%), Positives = 49/87 (56%)
Frame = -3
Query: 485 PAECFRRWCSFRSLRISPLHRKFPLPLPYSSLAVSTACPGLSPGI*RRT*KATYRRFTPN 306
P R WCS LRI PLH +F PL +S L VS A LS + +T ++ RFTPN
Sbjct: 11 PESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQSACARFTPN 70
Query: 305 HSG*RLHPLSYRGCWHRVSRCLFPRYR 225
SG RL P YRGCWH VSR YR
Sbjct: 71 KSGQRLPPTYYRGCWHVVSRDFLVDYR 97