BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006870
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   198   3e-49
emb|CBI35164.3| unnamed protein product [Vitis vinifera]              198   3e-49
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]   198   3e-49
ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45

>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
            [Vitis vinifera]
          Length = 731

 Score =  198 bits (504), Expect = 3e-49
 Identities = 100/157 (63%), Positives = 120/157 (76%), Gaps = 21/157 (13%)
 Frame = -3

Query: 410  RLGEVAAKQLLEMEPHNCGYNVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEV 231
            +LGE+AA QLLE+EP NCGYNV+MSNIYAAA+RW+D AGVRKTMK  G+KK PG S IEV
Sbjct: 545  QLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEV 604

Query: 230  NGSLHEFIMGGRSHPCTKETSEM---------------------LNVDDKEKEIALTYHS 114
            NG++HEF+MG +SHP  +  +EM                     LN+D++EKE ALTYHS
Sbjct: 605  NGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHS 664

Query: 113  ERLAIASGLISTAPSTPIRIVKNLRVCDDCHSARKLL 3
            E+LA+A GLISTAPSTPIRIVKNLRVC+DCH+A KLL
Sbjct: 665  EKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLL 701


>emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  198 bits (504), Expect = 3e-49
 Identities = 100/157 (63%), Positives = 120/157 (76%), Gaps = 21/157 (13%)
 Frame = -3

Query: 410 RLGEVAAKQLLEMEPHNCGYNVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEV 231
           +LGE+AA QLLE+EP NCGYNV+MSNIYAAA+RW+D AGVRKTMK  G+KK PG S IEV
Sbjct: 459 QLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEV 518

Query: 230 NGSLHEFIMGGRSHPCTKETSEM---------------------LNVDDKEKEIALTYHS 114
           NG++HEF+MG +SHP  +  +EM                     LN+D++EKE ALTYHS
Sbjct: 519 NGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHS 578

Query: 113 ERLAIASGLISTAPSTPIRIVKNLRVCDDCHSARKLL 3
           E+LA+A GLISTAPSTPIRIVKNLRVC+DCH+A KLL
Sbjct: 579 EKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLL 615


>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  198 bits (504), Expect = 3e-49
 Identities = 100/157 (63%), Positives = 120/157 (76%), Gaps = 21/157 (13%)
 Frame = -3

Query: 410  RLGEVAAKQLLEMEPHNCGYNVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEV 231
            +LGE+AA QLLE+EP NCGYNV+MSNIYAAA+RW+D AGVRKTMK  G+KK PG S IEV
Sbjct: 585  QLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEV 644

Query: 230  NGSLHEFIMGGRSHPCTKETSEM---------------------LNVDDKEKEIALTYHS 114
            NG++HEF+MG +SHP  +  +EM                     LN+D++EKE ALTYHS
Sbjct: 645  NGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHS 704

Query: 113  ERLAIASGLISTAPSTPIRIVKNLRVCDDCHSARKLL 3
            E+LA+A GLISTAPSTPIRIVKNLRVC+DCH+A KLL
Sbjct: 705  EKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLL 741


>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  193 bits (491), Expect = 1e-47
 Identities = 94/156 (60%), Positives = 117/156 (75%), Gaps = 21/156 (13%)
 Frame = -3

Query: 407 LGEVAAKQLLEMEPHNCGYNVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEVN 228
           +GE+AA++LL +EP NCGY V+MSNIYAAA+RWNDVAG+RK +KDTGIKK PG+SSIEVN
Sbjct: 520 MGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVN 579

Query: 227 GSLHEFIMGGRSHPCTKETSEML---------------------NVDDKEKEIALTYHSE 111
           G +H+F MG  +HP  ++ SEML                     N+D++EKE AL YHSE
Sbjct: 580 GLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSE 639

Query: 110 RLAIASGLISTAPSTPIRIVKNLRVCDDCHSARKLL 3
           +LA+A GLISTAP TPIR+VKNLR+CDDCH+  KLL
Sbjct: 640 KLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLL 675


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 801

 Score =  184 bits (466), Expect = 8e-45
 Identities = 94/157 (59%), Positives = 110/157 (70%), Gaps = 21/157 (13%)
 Frame = -3

Query: 410  RLGEVAAKQLLEMEPHNCGYNVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEV 231
            +LGE AAKQ L +EPH  GYNV+MSNIYA+A+RW DVA +R+ MKD GI K PG+SSIEV
Sbjct: 615  KLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEV 674

Query: 230  NGSLHEFIMGGRSHPCTKETSEML---------------------NVDDKEKEIALTYHS 114
            NG LHEFIMG R HP  K+  EM+                     N+D ++K  AL YHS
Sbjct: 675  NGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHS 734

Query: 113  ERLAIASGLISTAPSTPIRIVKNLRVCDDCHSARKLL 3
            E+LA+A GLISTAP  PIRIVKNLRVCDDCH+A KLL
Sbjct: 735  EKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLL 771