BLASTX nr result

ID: Coptis25_contig00006867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006867
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275558.1| PREDICTED: uncharacterized protein LOC100252...    69   4e-10
ref|XP_002320740.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003534600.1| PREDICTED: uncharacterized protein LOC100785...    60   2e-07
gb|ACU24238.1| unknown [Glycine max]                                   60   2e-07
ref|XP_003623784.1| hypothetical protein MTR_7g075640 [Medicago ...    59   4e-07

>ref|XP_002275558.1| PREDICTED: uncharacterized protein LOC100252268 [Vitis vinifera]
           gi|296089095|emb|CBI38798.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = +3

Query: 6   EIKFGDIVDXXXXXXXXXXXXXXX--IQDASHERLRLQAVEAYRKRKGWESRPGLHLPPM 179
           +IKFG++V+                 +QDAS ERLRLQAV+AYRKRKGW SRPG+HLPP 
Sbjct: 180 KIKFGEVVEAPPKLVAVPKALKALKTVQDASQERLRLQAVDAYRKRKGWVSRPGIHLPPP 239

Query: 180 RPSSPV 197
             ++P+
Sbjct: 240 VTTTPI 245


>ref|XP_002320740.1| predicted protein [Populus trichocarpa] gi|222861513|gb|EEE99055.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = +3

Query: 6   EIKFGDIVDXXXXXXXXXXXXXXXIQDASHERLRLQAVEAYRKRKGWESRPGLHLPP 176
           +I+FGD+V                + DAS ERLRLQA+EAYR RKGW SRPGLHLPP
Sbjct: 244 QIQFGDVVQAPPKFTAPSKLLKN-VHDASRERLRLQAIEAYRGRKGWTSRPGLHLPP 299


>ref|XP_003534600.1| PREDICTED: uncharacterized protein LOC100785748 [Glycine max]
          Length = 230

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 35/57 (61%)
 Frame = +3

Query: 6   EIKFGDIVDXXXXXXXXXXXXXXXIQDASHERLRLQAVEAYRKRKGWESRPGLHLPP 176
           +IKFGDIV                 ++AS ERLRLQA+E YR RKGW SRPG HLPP
Sbjct: 171 KIKFGDIVQAPPKLAVPPKA----FKNASQERLRLQAIEEYRSRKGWASRPGSHLPP 223


>gb|ACU24238.1| unknown [Glycine max]
          Length = 230

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/57 (54%), Positives = 35/57 (61%)
 Frame = +3

Query: 6   EIKFGDIVDXXXXXXXXXXXXXXXIQDASHERLRLQAVEAYRKRKGWESRPGLHLPP 176
           +IKFGDIV                 ++AS ERLRLQA+E YR RKGW SRPG HLPP
Sbjct: 171 KIKFGDIVQAPPKLAVPPKA----FKNASQERLRLQAIEEYRSRKGWASRPGSHLPP 223


>ref|XP_003623784.1| hypothetical protein MTR_7g075640 [Medicago truncatula]
           gi|355498799|gb|AES80002.1| hypothetical protein
           MTR_7g075640 [Medicago truncatula]
          Length = 215

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/57 (54%), Positives = 34/57 (59%)
 Frame = +3

Query: 6   EIKFGDIVDXXXXXXXXXXXXXXXIQDASHERLRLQAVEAYRKRKGWESRPGLHLPP 176
           +IKFGDIV                 QDASHERLRL+A+E YR RK W SRPG H PP
Sbjct: 153 KIKFGDIVQAPPKLSFNPKGFKIS-QDASHERLRLRAIEDYRSRKAWASRPGNHRPP 208


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