BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006854
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   199   2e-72
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   199   2e-72
emb|CBI36847.3| unnamed protein product [Vitis vinifera]              199   2e-72
gb|ABR18062.1| unknown [Picea sitchensis]                             194   5e-71
ref|XP_002523079.1| arginine/serine-rich splicing factor, putati...   192   4e-70

>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  199 bits (507), Expect(2) = 2e-72
 Identities = 99/134 (73%), Positives = 103/134 (76%)
 Frame = +2

Query: 167 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPIVEIDLKIPPRPPGYAFVEFEDSRDAED 346
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI  IDLKIPPRPPGYAFVEFE+SRDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60

Query: 347 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 526
           AIRGRDGYDFDGHRLRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120

Query: 527 SASWQDLKDHMRRA 568
           SASWQDLKDHMRRA
Sbjct: 121 SASWQDLKDHMRRA 134



 Score =  100 bits (249), Expect(2) = 2e-72
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +3

Query: 624 MRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRGYIRV 785
           MRRAGDVCFSQV+HDG GT G+VDYTNY+DM++A+ KLDDSEFRNAFSR Y+RV
Sbjct: 131 MRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRV 184


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score =  199 bits (507), Expect(2) = 2e-72
 Identities = 99/134 (73%), Positives = 103/134 (76%)
 Frame = +2

Query: 167 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPIVEIDLKIPPRPPGYAFVEFEDSRDAED 346
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI  IDLKIPPRPPGYAFVEFE+SRDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60

Query: 347 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 526
           AIRGRDGYDFDGHRLRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120

Query: 527 SASWQDLKDHMRRA 568
           SASWQDLKDHMRRA
Sbjct: 121 SASWQDLKDHMRRA 134



 Score =  100 bits (249), Expect(2) = 2e-72
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +3

Query: 624 MRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRGYIRV 785
           MRRAGDVCFSQV+HDG GT G+VDYTNY+DM++A+ KLDDSEFRNAFSR Y+RV
Sbjct: 131 MRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRV 184


>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  199 bits (507), Expect(2) = 2e-72
 Identities = 99/134 (73%), Positives = 103/134 (76%)
 Frame = +2

Query: 167 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPIVEIDLKIPPRPPGYAFVEFEDSRDAED 346
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI  IDLKIPPRPPGYAFVEFE+SRDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60

Query: 347 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 526
           AIRGRDGYDFDGHRLRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120

Query: 527 SASWQDLKDHMRRA 568
           SASWQDLKDHMRRA
Sbjct: 121 SASWQDLKDHMRRA 134



 Score =  100 bits (249), Expect(2) = 2e-72
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +3

Query: 624 MRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRGYIRV 785
           MRRAGDVCFSQV+HDG GT G+VDYTNY+DM++A+ KLDDSEFRNAFSR Y+RV
Sbjct: 131 MRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRV 184


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  194 bits (493), Expect(2) = 5e-71
 Identities = 98/135 (72%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
 Frame = +2

Query: 167 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPIVEIDLKIPPRPPGYAFVEFEDSRDAED 346
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPIV+IDLKIPPRPPGY F+EFED+RDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60

Query: 347 AIRGRDGYDFDGHRLRVELAHGGRGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLP 523
           AIRGRDGY+FDG+RLRVELAHGGRGQ                           V VSGLP
Sbjct: 61  AIRGRDGYNFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLP 120

Query: 524 PSASWQDLKDHMRRA 568
            SASWQDLKDHMRRA
Sbjct: 121 SSASWQDLKDHMRRA 135



 Score =  101 bits (252), Expect(2) = 5e-71
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = +3

Query: 624 MRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRGYIRV 785
           MRRAGDVCFSQV+ D  GTTG+VDYTNY+DM+YA+ KLDDSEFRNAFSRGYIRV
Sbjct: 132 MRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRV 185


>ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537641|gb|EEF39264.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 292

 Score =  192 bits (489), Expect(2) = 4e-70
 Identities = 97/134 (72%), Positives = 103/134 (76%)
 Frame = +2

Query: 167 MSSKASRTLYVGNLPGDIREREVEDIFYKYGPIVEIDLKIPPRPPGYAFVEFEDSRDAED 346
           MSS+ASRTLYVGNLPGDIREREVED+FYKYGPI  IDLKIPPRPPGYAFVEFE++RDAED
Sbjct: 1   MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60

Query: 347 AIRGRDGYDFDGHRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGLPP 526
           AIRGRDGYDFDGH+LRVELAHGGRG                           V V+GLP 
Sbjct: 61  AIRGRDGYDFDGHQLRVELAHGGRGH-SSSDRHSSHSGGGRGRGVSRRSEYRVLVTGLPS 119

Query: 527 SASWQDLKDHMRRA 568
           SASWQDLKDHMRRA
Sbjct: 120 SASWQDLKDHMRRA 133



 Score =  100 bits (248), Expect(2) = 4e-70
 Identities = 44/54 (81%), Positives = 50/54 (92%)
 Frame = +3

Query: 624 MRRAGDVCFSQVYHDGRGTTGVVDYTNYEDMRYAVHKLDDSEFRNAFSRGYIRV 785
           MRRAGDVCFSQV+ DG GTTG+VDYTNYEDM++A+ KLDDSEFRNAFSR Y+RV
Sbjct: 130 MRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIKKLDDSEFRNAFSRAYVRV 183