BLASTX nr result

ID: Coptis25_contig00006852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006852
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523138.1| conserved hypothetical protein [Ricinus comm...    55   1e-07
ref|XP_002515411.1| conserved hypothetical protein [Ricinus comm...    51   6e-07
emb|CBI21156.3| unnamed protein product [Vitis vinifera]               51   7e-07
ref|XP_003631800.1| PREDICTED: uncharacterized protein LOC100266...    51   7e-07
ref|XP_004145581.1| PREDICTED: uncharacterized protein LOC101212...    50   7e-07

>ref|XP_002523138.1| conserved hypothetical protein [Ricinus communis]
           gi|223537700|gb|EEF39323.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 466

 Score = 54.7 bits (130), Expect(2) = 1e-07
 Identities = 22/66 (33%), Positives = 41/66 (62%)
 Frame = -2

Query: 280 TMKRDYIAVNELIETIEFGFSYNQETKYIEADRQAWDAYFRAHPAARHLKGRMFPHFAEV 101
           T++  Y AV +L++  + GFS++   + + AD   WD Y + HP AR  + +  PH+ ++
Sbjct: 74  TLRNLYTAVKKLLD--QNGFSWDNNRQMVTADNDVWDEYIKMHPDARAYRIKTIPHYKDL 131

Query: 100 CVIFGN 83
           C+I+G+
Sbjct: 132 CLIYGD 137



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 465 QTRWSPMMDEILIQLLLEKCLNGTGRMSRNQFD 367
           +T W+P MD   I LLLE+   G      N+FD
Sbjct: 13  RTVWTPEMDRYFIGLLLEQVSKG------NKFD 39


>ref|XP_002515411.1| conserved hypothetical protein [Ricinus communis]
           gi|223545355|gb|EEF46860.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 766

 Score = 50.8 bits (120), Expect(2) = 6e-07
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = -2

Query: 277 MKRDYIAVNELIETIEFGFSYNQETKYIEADRQAWDAYFRAHPAARHLKGRMFPHFAEVC 98
           ++R Y  +  L+E    GFS++   + I A+   WDAY +AHP AR  + +  P + ++C
Sbjct: 403 LRRMYSDIKNLLENS--GFSWDSTREMITAEDHVWDAYTKAHPDARSYRVKTVPGYQKLC 460

Query: 97  VIFGNDFS 74
            IFG + S
Sbjct: 461 AIFGQENS 468



 Score = 27.3 bits (59), Expect(2) = 6e-07
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 465 QTRWSPMMDEILIQLLLEKCLNG 397
           +T W+P MD  LI LLLE+   G
Sbjct: 342 RTYWTPPMDRYLIDLLLEQVHRG 364


>emb|CBI21156.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score = 50.8 bits (120), Expect(2) = 7e-07
 Identities = 22/68 (32%), Positives = 42/68 (61%)
 Frame = -2

Query: 277 MKRDYIAVNELIETIEFGFSYNQETKYIEADRQAWDAYFRAHPAARHLKGRMFPHFAEVC 98
           ++R Y  +  L++  + GFS+++  + + A+   WDAY +AHP AR  + +  P + ++C
Sbjct: 398 LRRQYNDIKILLQ--QSGFSWDETREMVTAEDHVWDAYTKAHPDARTYRVKTVPSYHKLC 455

Query: 97  VIFGNDFS 74
           VI+G + S
Sbjct: 456 VIYGQESS 463



 Score = 26.9 bits (58), Expect(2) = 7e-07
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 477 ASQQQTRWSPMMDEILIQLLLEKCLNG 397
           + + +T W+P MD  LI LLL++   G
Sbjct: 333 SDRSRTYWTPPMDRYLIDLLLDQVHRG 359


>ref|XP_003631800.1| PREDICTED: uncharacterized protein LOC100266462 [Vitis vinifera]
          Length = 771

 Score = 50.8 bits (120), Expect(2) = 7e-07
 Identities = 22/68 (32%), Positives = 42/68 (61%)
 Frame = -2

Query: 277 MKRDYIAVNELIETIEFGFSYNQETKYIEADRQAWDAYFRAHPAARHLKGRMFPHFAEVC 98
           ++R Y  +  L++  + GFS+++  + + A+   WDAY +AHP AR  + +  P + ++C
Sbjct: 398 LRRQYNDIKILLQ--QSGFSWDETREMVTAEDHVWDAYTKAHPDARTYRVKTVPSYHKLC 455

Query: 97  VIFGNDFS 74
           VI+G + S
Sbjct: 456 VIYGQESS 463



 Score = 26.9 bits (58), Expect(2) = 7e-07
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 477 ASQQQTRWSPMMDEILIQLLLEKCLNG 397
           + + +T W+P MD  LI LLL++   G
Sbjct: 333 SDRSRTYWTPPMDRYLIDLLLDQVHRG 359


>ref|XP_004145581.1| PREDICTED: uncharacterized protein LOC101212813 [Cucumis sativus]
           gi|449515081|ref|XP_004164578.1| PREDICTED:
           uncharacterized LOC101212813 [Cucumis sativus]
          Length = 767

 Score = 49.7 bits (117), Expect(2) = 7e-07
 Identities = 23/68 (33%), Positives = 40/68 (58%)
 Frame = -2

Query: 277 MKRDYIAVNELIETIEFGFSYNQETKYIEADRQAWDAYFRAHPAARHLKGRMFPHFAEVC 98
           ++R Y  +  L+E  + GFS+++  + + AD   WDAY + HP AR  + +  P + ++C
Sbjct: 392 LRRLYNEIKILLE--QRGFSWDENREIVTADDHVWDAYTKDHPDARSYRVKTVPSYHKLC 449

Query: 97  VIFGNDFS 74
            IFG + S
Sbjct: 450 FIFGEESS 457



 Score = 28.1 bits (61), Expect(2) = 7e-07
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 480 MASQQQTRWSPMMDEILIQLLLEKCLNG 397
           ++ + +T W+P MD  LI LLLE+   G
Sbjct: 326 VSDRTRTYWTPPMDRYLIDLLLEQVHRG 353


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