BLASTX nr result

ID: Coptis25_contig00006849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006849
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275422.1| PREDICTED: UPF0176 protein Mfla_2319-like [V...   171   4e-41
emb|CAN82942.1| hypothetical protein VITISV_013130 [Vitis vinifera]   171   7e-41
ref|XP_003518278.1| PREDICTED: UPF0176 protein Mfla_2319-like [G...   168   5e-40
gb|ACU20686.1| unknown [Glycine max]                                  168   5e-40
ref|XP_002325492.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38

>ref|XP_002275422.1| PREDICTED: UPF0176 protein Mfla_2319-like [Vitis vinifera]
          Length = 431

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/116 (69%), Positives = 93/116 (80%)
 Frame = +3

Query: 3   RNKYETRIGKFKGAVDPCTTAFREFPSWVDDEFQITKPDSGQSKAVVESKVESNTEQPDV 182
           RN YETRIG+FKGAVDP TTAF+EFPSWV+D+FQ+ +PD   S+        S  +Q +V
Sbjct: 214 RNDYETRIGRFKGAVDPYTTAFQEFPSWVEDQFQLAEPDGQHSQVEANDSNGSPKKQAEV 273

Query: 183 QERHKPTKVAMYCTGGIRCEKASSFLLSKGFKEVYHLKGGILKYLEEVPEKDSLWE 350
           Q    P +VAMYCTGGIRCEKASSFLLSKGFKEVYHL+GGILKYLEEVPE +SLWE
Sbjct: 274 QGEKMPPRVAMYCTGGIRCEKASSFLLSKGFKEVYHLEGGILKYLEEVPETESLWE 329


>emb|CAN82942.1| hypothetical protein VITISV_013130 [Vitis vinifera]
          Length = 500

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/116 (69%), Positives = 92/116 (79%)
 Frame = +3

Query: 3   RNKYETRIGKFKGAVDPCTTAFREFPSWVDDEFQITKPDSGQSKAVVESKVESNTEQPDV 182
           RN YETRIG+FKGAVDP TTAF EFPSWV+D+FQ+ +PD   S+        S  +Q +V
Sbjct: 283 RNDYETRIGRFKGAVDPYTTAFXEFPSWVEDQFQLAEPDGQHSQVEANDSNGSPKKQAEV 342

Query: 183 QERHKPTKVAMYCTGGIRCEKASSFLLSKGFKEVYHLKGGILKYLEEVPEKDSLWE 350
           Q    P +VAMYCTGGIRCEKASSFLLSKGFKEVYHL+GGILKYLEEVPE +SLWE
Sbjct: 343 QGEKXPPRVAMYCTGGIRCEKASSFLLSKGFKEVYHLEGGILKYLEEVPETESLWE 398


>ref|XP_003518278.1| PREDICTED: UPF0176 protein Mfla_2319-like [Glycine max]
          Length = 465

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/116 (68%), Positives = 95/116 (81%)
 Frame = +3

Query: 3   RNKYETRIGKFKGAVDPCTTAFREFPSWVDDEFQITKPDSGQSKAVVESKVESNTEQPDV 182
           RN YETRIGKFKGAVDPCTT+FREFPSWVD+ FQ+T+ D  +   V  + V+   ++ D 
Sbjct: 249 RNNYETRIGKFKGAVDPCTTSFREFPSWVDEHFQLTETDDREHPKVEVNSVQPAEKEMDN 308

Query: 183 QERHKPTKVAMYCTGGIRCEKASSFLLSKGFKEVYHLKGGILKYLEEVPEKDSLWE 350
           + +H P +VAMYCTGGIRCEKA+S LLSKGFKEV+HL+GGILKYLEEVPE +SLWE
Sbjct: 309 KRQHMP-RVAMYCTGGIRCEKATSLLLSKGFKEVFHLEGGILKYLEEVPETESLWE 363


>gb|ACU20686.1| unknown [Glycine max]
          Length = 250

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/116 (68%), Positives = 95/116 (81%)
 Frame = +3

Query: 3   RNKYETRIGKFKGAVDPCTTAFREFPSWVDDEFQITKPDSGQSKAVVESKVESNTEQPDV 182
           RN YETRIGKFKGAVDPCTT+FREFPSWVD+ FQ+T+ D  +   V  + V+   ++ D 
Sbjct: 34  RNNYETRIGKFKGAVDPCTTSFREFPSWVDEHFQLTETDDREHPKVEVNSVQPAEKEMDN 93

Query: 183 QERHKPTKVAMYCTGGIRCEKASSFLLSKGFKEVYHLKGGILKYLEEVPEKDSLWE 350
           + +H P +VAMYCTGGIRCEKA+S LLSKGFKEV+HL+GGILKYLEEVPE +SLWE
Sbjct: 94  KRQHMP-RVAMYCTGGIRCEKATSLLLSKGFKEVFHLEGGILKYLEEVPETESLWE 148


>ref|XP_002325492.1| predicted protein [Populus trichocarpa] gi|222862367|gb|EEE99873.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/116 (67%), Positives = 89/116 (76%)
 Frame = +3

Query: 3   RNKYETRIGKFKGAVDPCTTAFREFPSWVDDEFQITKPDSGQSKAVVESKVESNTEQPDV 182
           RN YETRIGKFKGAVDPCT+AFREFPSWV DEFQ  + D            +  T+ P+ 
Sbjct: 184 RNNYETRIGKFKGAVDPCTSAFREFPSWVGDEFQHAETDEVNCSG---GSTDKETKSPN- 239

Query: 183 QERHKPTKVAMYCTGGIRCEKASSFLLSKGFKEVYHLKGGILKYLEEVPEKDSLWE 350
             +  P KVAMYCTGGIRCEKASSFLL+KGFKEVYHL+GGILKYLEE+P+ +SLWE
Sbjct: 240 --KKMPQKVAMYCTGGIRCEKASSFLLNKGFKEVYHLEGGILKYLEEIPKSESLWE 293


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