BLASTX nr result

ID: Coptis25_contig00006848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006848
         (1728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269137.2| PREDICTED: uncharacterized protein LOC100250...   162   2e-37
emb|CBI37339.3| unnamed protein product [Vitis vinifera]              162   2e-37
ref|XP_002301790.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-35
ref|XP_002521086.1| transcription factor, putative [Ricinus comm...   152   2e-34
ref|XP_003611755.1| hypothetical protein MTR_5g017500 [Medicago ...   142   2e-31

>ref|XP_002269137.2| PREDICTED: uncharacterized protein LOC100250032 [Vitis vinifera]
          Length = 327

 Score =  162 bits (411), Expect = 2e-37
 Identities = 79/112 (70%), Positives = 87/112 (77%), Gaps = 5/112 (4%)
 Frame = +2

Query: 473 PKKTQPLPWTHLETVNLIEAYQEKWYSLKRGQLKASQWEEVANAVATRCGFKELSKSATQ 652
           PKK QPLPW+H ET +LI+AYQEKWYSLKRGQLKASQWEEVA  VA RC + E SKSATQ
Sbjct: 62  PKKAQPLPWSHQETTHLIQAYQEKWYSLKRGQLKASQWEEVAVTVAARCNYDEPSKSATQ 121

Query: 653 CRHKMEKLRKRYRTEKQR-----PYPSVWAYFDMMDFMERGPFPISARPSPV 793
           CRHK+EKLRKRYR EKQR        S W YF +MD +ERGP PISA+P  V
Sbjct: 122 CRHKIEKLRKRYRAEKQRIVIGAAASSSWPYFHLMDSLERGPLPISAQPMSV 173



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 39/55 (70%), Positives = 48/55 (87%)
 Frame = +2

Query: 1178 ELASVVRAFGEGFVRVENMKLEMMKETEKQRIEMEKKRMEMILESQRSIVDTITR 1342
            ELA  +RAF E FVR+ENMK+EMMKETE++R+EME +RMEMI+ESQR IV+TI R
Sbjct: 259  ELAGEMRAFAERFVRMENMKMEMMKETERRRMEMESRRMEMIVESQRKIVETIGR 313


>emb|CBI37339.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  162 bits (411), Expect = 2e-37
 Identities = 79/112 (70%), Positives = 87/112 (77%), Gaps = 5/112 (4%)
 Frame = +2

Query: 473 PKKTQPLPWTHLETVNLIEAYQEKWYSLKRGQLKASQWEEVANAVATRCGFKELSKSATQ 652
           PKK QPLPW+H ET +LI+AYQEKWYSLKRGQLKASQWEEVA  VA RC + E SKSATQ
Sbjct: 17  PKKAQPLPWSHQETTHLIQAYQEKWYSLKRGQLKASQWEEVAVTVAARCNYDEPSKSATQ 76

Query: 653 CRHKMEKLRKRYRTEKQR-----PYPSVWAYFDMMDFMERGPFPISARPSPV 793
           CRHK+EKLRKRYR EKQR        S W YF +MD +ERGP PISA+P  V
Sbjct: 77  CRHKIEKLRKRYRAEKQRIVIGAAASSSWPYFHLMDSLERGPLPISAQPMSV 128


>ref|XP_002301790.1| predicted protein [Populus trichocarpa] gi|222843516|gb|EEE81063.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  154 bits (390), Expect = 5e-35
 Identities = 76/108 (70%), Positives = 85/108 (78%), Gaps = 5/108 (4%)
 Frame = +2

Query: 476 KKTQPLPWTHLETVNLIEAYQEKWYSLKRGQLKASQWEEVANAVATRCG--FKELSKSAT 649
           KKTQPLPWTH ET++LI+AYQEKWYSLKRGQLKASQWEEVA  VA RCG  +   SKSA 
Sbjct: 26  KKTQPLPWTHQETIHLIQAYQEKWYSLKRGQLKASQWEEVAVTVAARCGYDYNHPSKSAV 85

Query: 650 QCRHKMEKLRKRYRTEKQ---RPYPSVWAYFDMMDFMERGPFPISARP 784
           QCRHKMEKLR+RYR EK+         W YFD+MD +ERGP PISA+P
Sbjct: 86  QCRHKMEKLRRRYRDEKRVMALGGTCYWQYFDLMDSLERGPLPISAQP 133



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = +2

Query: 1181 LASVVRAFGEGFVRVENMKLEMMKETEKQRIEMEKKRMEMILESQRSIVDTITRTFDL 1354
            LA  ++AF E  V++E  KLE+MKETE+ R+EME K++EMIL+S   IV  I   F L
Sbjct: 235  LAGQIKAFSERMVKLERKKLEVMKETERSRMEMENKKLEMILDSHSKIVHMIGEAFGL 292


>ref|XP_002521086.1| transcription factor, putative [Ricinus communis]
           gi|223539655|gb|EEF41237.1| transcription factor,
           putative [Ricinus communis]
          Length = 291

 Score =  152 bits (385), Expect = 2e-34
 Identities = 73/108 (67%), Positives = 85/108 (78%), Gaps = 5/108 (4%)
 Frame = +2

Query: 476 KKTQPLPWTHLETVNLIEAYQEKWYSLKRGQLKASQWEEVANAVATRCGFK--ELSKSAT 649
           KK  P+PWTH ETV+LI+AYQEKWYSLKRGQLKA+QWEEVA  VA RCG++   L+K+  
Sbjct: 27  KKPHPVPWTHQETVHLIQAYQEKWYSLKRGQLKANQWEEVAETVAARCGYEYNHLAKTVI 86

Query: 650 QCRHKMEKLRKRYRTEKQR---PYPSVWAYFDMMDFMERGPFPISARP 784
           QCRHKMEKLRKRYR E++R        W YFD+MD +ERGP PISARP
Sbjct: 87  QCRHKMEKLRKRYREERRRLSLNGTCFWQYFDLMDSLERGPLPISARP 134



 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = +2

Query: 1178 ELASVVRAFGEGFVRVENMKLEMMKETEKQRIEMEKKRMEMILESQRSIVDTITRTF 1348
            ELA  +RAF E  V +E  K++MMKETE+ R+EME KR+EMIL+SQR IVD I+  F
Sbjct: 223  ELAGEIRAFTERIVGMERKKMQMMKETERWRMEMENKRIEMILDSQRKIVDMISTAF 279


>ref|XP_003611755.1| hypothetical protein MTR_5g017500 [Medicago truncatula]
           gi|355513090|gb|AES94713.1| hypothetical protein
           MTR_5g017500 [Medicago truncatula]
          Length = 229

 Score =  142 bits (359), Expect = 2e-31
 Identities = 71/120 (59%), Positives = 86/120 (71%), Gaps = 10/120 (8%)
 Frame = +2

Query: 455 QFSTSIP-KKTQPLPWTHLETVNLIEAYQEKWYSLKRGQLKASQWEEVANAVATRCG--F 625
           + + S+P KK QP+PWTH ET+NLI AYQ+KWYSLKRG L+ SQWEEVA  VA RCG  +
Sbjct: 7   ELTLSLPTKKPQPIPWTHQETINLIRAYQDKWYSLKRGPLRGSQWEEVAVVVAARCGYDY 66

Query: 626 KELSKSATQCRHKMEKLRKRYRTEKQR-------PYPSVWAYFDMMDFMERGPFPISARP 784
              SK+A QCRHKMEKLR+R+R+EK+R            W YF +MD +ERGP PIS RP
Sbjct: 67  NHPSKTALQCRHKMEKLRQRHRSEKRRLTATSSVASSRSWQYFRLMDDLERGPLPISVRP 126



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 32/56 (57%), Positives = 43/56 (76%)
 Frame = +2

Query: 1181 LASVVRAFGEGFVRVENMKLEMMKETEKQRIEMEKKRMEMILESQRSIVDTITRTF 1348
            L + +R+F E  + +ENMK+EMMKETE+ R+EME KR+ MILESQ  IVD+I + F
Sbjct: 171  LTAELRSFAERIIGLENMKMEMMKETERFRLEMENKRIRMILESQWRIVDSIGKAF 226


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