BLASTX nr result

ID: Coptis25_contig00006847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006847
         (1642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143
emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]   510   e-142
emb|CBI20108.3| unnamed protein product [Vitis vinifera]              509   e-141
dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thalian...   435   e-119
gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsi...   423   e-116

>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
            predicted protein [Populus trichocarpa]
          Length = 662

 Score =  514 bits (1325), Expect = e-143
 Identities = 262/452 (57%), Positives = 342/452 (75%), Gaps = 4/452 (0%)
 Frame = -3

Query: 1640 LTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCLMEWDIDRKLFSMTFDKLFSNE 1464
            L AHY DE   LQ+K+LNFV +D  H+E  L+EVI  CLMEWD++ KLF+MTFD  F+++
Sbjct: 218  LIAHYIDEDWKLQQKILNFVTLDSSHTEDMLSEVIINCLMEWDVECKLFAMTFDDCFADD 277

Query: 1463 -VVFRIRERLSQSRLLLNSGQLFHVRCAMNILNMIVQNVLEALHEVTHKIRESVRYVKSS 1287
             +V RI++R+SQ+R LL++GQLF VR A ++LN+IVQ+ +E + EVT K+R SVRYVKSS
Sbjct: 278  DIVLRIKDRISQNRPLLSNGQLFDVRSAAHVLNLIVQDAMETIREVTEKVRGSVRYVKSS 337

Query: 1286 DTIQQSFSEMAQQLIGDTQRSLCLDCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTLA 1107
              IQ  F+E+A+Q+   +Q++L LD P++WN+TY M+E  I YK AF  LQE D  YT A
Sbjct: 338  QVIQGKFNEIAEQIGISSQKNLVLDLPTRWNSTYFMLETVIGYKSAFCFLQERDPAYTSA 397

Query: 1106 PSDVEWERASTVCRYLKLFIEVANVFTG--ATTANLYFPELCDIHLQLIERCKSSDPFIH 933
             +D EWE AS++  YLKLF+E+ N+F+G    TAN+YFPE+CD+H+QLIE CK+ D F+ 
Sbjct: 398  LTDTEWEWASSITGYLKLFVEITNIFSGDKCPTANIYFPEICDVHIQLIEWCKNPDDFLS 457

Query: 932  SMALKMKSRFDTYWNISSLVLAIAAILDPRFKMKLVEYYYPQIYGPSSSLDHINEVFNGI 753
            SMA KMK++FD YW+  SL LA+AAILDPRFKMKLVEYYY QIYG S++LD I EV +GI
Sbjct: 458  SMASKMKAKFDRYWSKCSLALAVAAILDPRFKMKLVEYYYSQIYG-STALDRIKEVSDGI 516

Query: 752  KDLYHEYAISSTMTSFDHGLTSDVPSSNGLKGALHSMNNDTRDRLSGFDKFLNDTSDNQH 573
            K+L++ Y+I ST+   D G  S +P S     +L S + D+RDRL GFDKFL+++S  Q 
Sbjct: 517  KELFNAYSICSTLV--DQG--STLPGS-----SLPSTSTDSRDRLKGFDKFLHESSQGQS 567

Query: 572  LKSELDKYLEEPVFPRNVDFDILNWWRVNAPKYPILFLMARDILGIPMSTVEFDSAFNIG 393
              S+LDKYLEEPVFPRN DF+ILNWW+V+ P+YPIL +MARDILG PMST+  + AF +G
Sbjct: 568  AISDLDKYLEEPVFPRNCDFNILNWWKVHTPRYPILSMMARDILGTPMSTIAPELAFGVG 627

Query: 392  ERVLDPYRSSLETDILQALVCTHDWLRDETEG 297
             RVLD YRSSL  D  QAL+CT DWL+ E+EG
Sbjct: 628  GRVLDSYRSSLNPDTRQALICTRDWLQVESEG 659


>emb|CAN60218.1| hypothetical protein VITISV_006612 [Vitis vinifera]
          Length = 667

 Score =  510 bits (1313), Expect = e-142
 Identities = 262/461 (56%), Positives = 334/461 (72%), Gaps = 4/461 (0%)
 Frame = -3

Query: 1640 LTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCLMEWDIDRKLFSMTFDKLFSNE 1464
            LTAHY DE   LQKK+LNF+ +DP H+E  L+E I  CLMEW++  KLFSMTF    +N+
Sbjct: 214  LTAHYIDEDWKLQKKILNFLSLDPSHTEDMLSEFIIKCLMEWEVGHKLFSMTFHDCATND 273

Query: 1463 -VVFRIRERLSQSRLLLNSGQLFHVRCAMNILNMIVQNVLEALHEVTHKIRESVRYVKSS 1287
             V  R++E  SQ R LL SGQL  VRC  ++LN+IVQ+ +EAL EVTHKIRESVRYVK+S
Sbjct: 274  DVALRVKEHFSQDRPLLGSGQLLDVRCVGHVLNLIVQDCIEALREVTHKIRESVRYVKTS 333

Query: 1286 DTIQQSFSEMAQQLIGDTQRSLCLDCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTLA 1107
                  F+E+AQQ+  ++Q++L LDCP+QWN+TY M++  +EYK AFS LQE D  YT+A
Sbjct: 334  QATLGKFNEIAQQVGINSQQNLFLDCPTQWNSTYLMLDTVLEYKGAFSLLQEHDPGYTVA 393

Query: 1106 PSDVEWERASTVCRYLKLFIEVANVFTG--ATTANLYFPELCDIHLQLIERCKSSDPFIH 933
             SD EWE AS++  Y+KL +E+  V +     TAN+YFPE+CDIH+QLIE CKS D FI 
Sbjct: 394  LSDTEWEWASSITSYMKLLLEIIAVLSSNKCPTANIYFPEICDIHIQLIEWCKSPDDFIS 453

Query: 932  SMALKMKSRFDTYWNISSLVLAIAAILDPRFKMKLVEYYYPQIYGPSSSLDHINEVFNGI 753
            S+ALKMK++FD YW+  SL LA+A ILDPRFKMKLVEYYYPQIYG + + D I +V +GI
Sbjct: 454  SLALKMKAKFDKYWSKCSLALAVAVILDPRFKMKLVEYYYPQIYG-NDAADRIKDVSDGI 512

Query: 752  KDLYHEYAISSTMTSFDHGLTSDVPSSNGLKGALHSMNNDTRDRLSGFDKFLNDTSDNQH 573
            K+L++ Y   ST  S   G+   +P S+     L S +ND+RDRL GFDKF+++TS NQ+
Sbjct: 513  KELFNVYC--STSASLHQGVA--LPGSS-----LPSTSNDSRDRLKGFDKFIHETSQNQN 563

Query: 572  LKSELDKYLEEPVFPRNVDFDILNWWRVNAPKYPILFLMARDILGIPMSTVEFDSAFNIG 393
            + S+LDKYLEEPVFPRN DF ILNWW+V  P+YPIL +M RD+LGIPMSTV  +  F+ G
Sbjct: 564  IVSDLDKYLEEPVFPRNCDFHILNWWKVQKPRYPILSMMVRDVLGIPMSTVAPEVVFSTG 623

Query: 392  ERVLDPYRSSLETDILQALVCTHDWLRDETEGSEAIRMALS 270
             RVLD YRSSL  D  QAL+CT DWL+   EG   + +  S
Sbjct: 624  ARVLDHYRSSLNPDTRQALICTQDWLQTGLEGGPLVHVIAS 664


>emb|CBI20108.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  509 bits (1310), Expect = e-141
 Identities = 262/451 (58%), Positives = 331/451 (73%), Gaps = 4/451 (0%)
 Frame = -3

Query: 1640 LTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCLMEWDIDRKLFSMTFDKLFSNE 1464
            LTAHY DE   LQKK+LNFV +DP H+E  L+EVI  CLMEW++  KLFSMTF    +N+
Sbjct: 214  LTAHYIDEDWKLQKKILNFVSLDPSHTEDMLSEVIIKCLMEWEVGHKLFSMTFHDCATND 273

Query: 1463 -VVFRIRERLSQSRLLLNSGQLFHVRCAMNILNMIVQNVLEALHEVTHKIRESVRYVKSS 1287
             V  R++E  SQ R LL SGQL  VRC  ++LN+IVQ+ +EAL EVTHKIRESVRYVK+S
Sbjct: 274  DVALRVKEHFSQDRPLLGSGQLLDVRCVGHVLNLIVQDCIEALREVTHKIRESVRYVKTS 333

Query: 1286 DTIQQSFSEMAQQLIGDTQRSLCLDCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTLA 1107
                  F+E+AQQ+  ++Q++L LDCP+QWN+TY M++  +EYK AFS LQE D  YT+A
Sbjct: 334  QATLGKFNEIAQQVGINSQQNLFLDCPTQWNSTYLMLDRVLEYKGAFSLLQEHDPGYTVA 393

Query: 1106 PSDVEWERASTVCRYLKLFIEVANVFTG--ATTANLYFPELCDIHLQLIERCKSSDPFIH 933
             SD EWE AS++  Y+KL +E+  V +     TAN+YFPE+CDIH+QLIE CKS D FI 
Sbjct: 394  LSDTEWEWASSITSYMKLLLEIIAVLSSNKCPTANIYFPEICDIHIQLIEWCKSPDDFIS 453

Query: 932  SMALKMKSRFDTYWNISSLVLAIAAILDPRFKMKLVEYYYPQIYGPSSSLDHINEVFNGI 753
            S+ALKMK++FD YW+  SL LA+A ILDPRFKMKLVEYYYPQIYG  ++ D I +V +GI
Sbjct: 454  SLALKMKAKFDKYWSKCSLALAVAVILDPRFKMKLVEYYYPQIYGTDAA-DRIKDVSDGI 512

Query: 752  KDLYHEYAISSTMTSFDHGLTSDVPSSNGLKGALHSMNNDTRDRLSGFDKFLNDTSDNQH 573
            K+L++ Y   ST  S   G+   +P S+     L S +ND+RDRL GFDKF+++TS NQ+
Sbjct: 513  KELFNVYC--STSASLHQGVA--LPGSS-----LPSTSNDSRDRLKGFDKFIHETSQNQN 563

Query: 572  LKSELDKYLEEPVFPRNVDFDILNWWRVNAPKYPILFLMARDILGIPMSTVEFDSAFNIG 393
            + S+LDKYLEEPVFPRN DF ILNWW+V  P+YPIL +M RD+LGIPMSTV  +  F+ G
Sbjct: 564  IVSDLDKYLEEPVFPRNCDFHILNWWKVQKPRYPILSMMVRDVLGIPMSTVAPEVVFSTG 623

Query: 392  ERVLDPYRSSLETDILQALVCTHDWLRDETE 300
             RVLD YRSSL  D  QAL+CT DWL+   E
Sbjct: 624  ARVLDHYRSSLNPDTRQALICTQDWLQTGLE 654


>dbj|BAB02646.1| Ac transposase-like protein [Arabidopsis thaliana]
            gi|18176330|gb|AAL60024.1| unknown protein [Arabidopsis
            thaliana] gi|20465375|gb|AAM20091.1| unknown protein
            [Arabidopsis thaliana]
          Length = 662

 Score =  435 bits (1119), Expect = e-119
 Identities = 230/453 (50%), Positives = 313/453 (69%), Gaps = 4/453 (0%)
 Frame = -3

Query: 1640 LTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCLMEWDIDRKLFSMTFDKLFSNE 1464
            L ++Y DE   L + VLNF+ +DP H+E  L+EVI  CL+EW ++ KLF++TFD +  NE
Sbjct: 216  LASNYIDEEWRLHRNVLNFITLDPSHTEDMLSEVIIRCLIEWSLENKLFAVTFDSVSVNE 275

Query: 1463 -VVFRIRERLSQSRLLLNSGQLFHVRCAMNILNMIVQNVLEALHEVTHKIRESVRYVKSS 1287
             +V RI++ +SQS  +L +GQLF ++ A ++LN +V++ LEA+ +V  KIR SVRYVKSS
Sbjct: 276  EIVLRIKDHMSQSSQILINGQLFELKSAAHLLNSLVEDCLEAMRDVIQKIRGSVRYVKSS 335

Query: 1286 DTIQQSFSEMAQQLIGDTQRSLCLDCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTLA 1107
             + Q  F+E+AQ    ++Q+ L LD     N+T+ M+E  +EYK AF HL++ D  +  +
Sbjct: 336  QSTQVRFNEIAQLAGINSQKILVLDSIVNSNSTFVMLETVLEYKGAFCHLRDHDHSFDSS 395

Query: 1106 PSDVEWERASTVCRYLKLFIEVANVFTG--ATTANLYFPELCDIHLQLIERCKSSDPFIH 933
             +D EWE    V  YLKL  ++A+ F+     TAN+YF E+CDIH+QL+E CK+ D F+ 
Sbjct: 396  LTDEEWEWTRYVTGYLKLVFDIASDFSANKCPTANVYFAEMCDIHIQLVEWCKNQDNFLS 455

Query: 932  SMALKMKSRFDTYWNISSLVLAIAAILDPRFKMKLVEYYYPQIYGPSSSLDHINEVFNGI 753
            S+A  MK++FD YWN  SLVLAIAAILDPRFKMKLVEYYY +IYG S++LD I EV NG+
Sbjct: 456  SLAANMKAKFDEYWNKCSLVLAIAAILDPRFKMKLVEYYYSKIYG-STALDRIKEVSNGV 514

Query: 752  KDLYHEYAISSTMTSFDHGLTSDVPSSNGLKGALHSMNNDTRDRLSGFDKFLNDTSDNQH 573
            K+L   Y++ S +         D  S +GL  A    + DTRDRL GFDKFL++TS NQ+
Sbjct: 515  KELLDAYSMCSAIVG------EDSFSGSGLGRA----SMDTRDRLKGFDKFLHETSQNQN 564

Query: 572  LKSELDKYLEEPVFPRNVDFDILNWWRVNAPKYPILFLMARDILGIPMSTVEFDSAFNIG 393
              ++LDKYL EP+FPR+ +F+ILN+W+V+ P+YPIL L+ARDILG PMS    DS FN G
Sbjct: 565  TTTDLDKYLSEPIFPRSGEFNILNYWKVHTPRYPILSLLARDILGTPMSICAPDSTFNSG 624

Query: 392  ERVLDPYRSSLETDILQALVCTHDWLRDETEGS 294
              V+   +SSL  DI QAL C HDWL  ETEG+
Sbjct: 625  TPVISDSQSSLNPDIRQALFCAHDWLSTETEGT 657


>gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsis thaliana]
          Length = 676

 Score =  423 bits (1087), Expect = e-116
 Identities = 229/459 (49%), Positives = 310/459 (67%), Gaps = 10/459 (2%)
 Frame = -3

Query: 1640 LTAHYFDESLLLQKKVLNFVMVDP-HSEQSLAEVINTCLMEWDIDRKLFSMTFDKL--FS 1470
            L AHY DE   L+K+VLNF MVDP HS + LAEVI TCLMEWDIDRKLFSM       FS
Sbjct: 223  LAAHYIDEGWELKKRVLNFFMVDPSHSGEMLAEVIMTCLMEWDIDRKLFSMASSHAPPFS 282

Query: 1469 NEVVFRIRERLSQSRLLLNSGQLFHVRCAMNILNMIVQNVLEALHEVTHKIRESVRYVKS 1290
              V  +IR+RLSQ++ L   GQLF V C +N++N +VQ+ LEA  +  + IRES+RYVKS
Sbjct: 283  ENVASKIRDRLSQNKFLYCYGQLFDVSCGVNVINEMVQDSLEACCDTINIIRESIRYVKS 342

Query: 1289 SDTIQQSFSEMAQQLIGDTQRSLCLDCPSQWNTTYAMIEAAIEYKIAFSHLQECDSDYTL 1110
            S++IQ  F++   +    ++R+LC+D P +W++T  M+E A+E K AFS + E D D  L
Sbjct: 343  SESIQDRFNQWIVETGAVSERNLCIDDPMRWDSTCTMLENALEQKSAFSLMNEHDPDSVL 402

Query: 1109 APSDVEWERASTVCRYLKLFIEVANVFTGAT--TANLYFPELCDIHLQLIERCKSSDPFI 936
             PSD+EWER  T+  +LK+F+EV N FT ++   AN+YFPE+CDIHL+LIE  K+ D FI
Sbjct: 403  CPSDLEWERLGTIVEFLKVFVEVINAFTKSSCLPANMYFPEVCDIHLRLIEWSKNPDDFI 462

Query: 935  HSMALKMKSRFDTYWNISSLVLAIAAILDPRFKMKLVEYYYPQIYGPSSSLDHINEVFNG 756
             S+ + M+ +FD +W+ + LVLAIA ILDPRFKMKLVEYYYP  YG S+S + I ++   
Sbjct: 463  SSLVVNMRKKFDDFWDKNYLVLAIATILDPRFKMKLVEYYYPLFYGTSAS-ELIEDISEC 521

Query: 755  IKDLYHEYAISSTMTSFDHGLTSDVPSSNGLKGALHSMNNDTRDRLSGFDKFLND--TSD 582
            IK LY E+++ S + S +  L       +   G  H    D  DRL+ FD+++N+  T+ 
Sbjct: 522  IKLLYDEHSVGSLLASSNQALDWQ-NHHHRSNGVAHGKEPD--DRLTEFDRYINETTTTP 578

Query: 581  NQHLKSELDKYLEEPVFPRNVDFDILNWWRVNAPKYPILFLMARDILGIPMSTVEF-DSA 405
             Q  KS+L+KYLEEP+FPRN DFDILNWW+V+ PKYPIL +MAR++L +PM  V   + A
Sbjct: 579  GQDSKSDLEKYLEEPLFPRNSDFDILNWWKVHTPKYPILSMMARNVLAVPMLNVSSEEDA 638

Query: 404  FNIGE--RVLDPYRSSLETDILQALVCTHDWLRDETEGS 294
            F   +  RV + +R SL    +QAL+C  DW++ E E S
Sbjct: 639  FETCQRRRVSETWR-SLRPSTVQALMCAQDWIQSELESS 676


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