BLASTX nr result

ID: Coptis25_contig00006846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006846
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI41116.3| unnamed protein product [Vitis vinifera]              295   1e-77
ref|XP_002530645.1| conserved hypothetical protein [Ricinus comm...   278   2e-72
ref|XP_002327627.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69
ref|XP_003635601.1| PREDICTED: uncharacterized protein LOC100855...   266   1e-68
gb|ABK26915.1| unknown [Picea sitchensis]                             254   3e-65

>emb|CBI41116.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  295 bits (756), Expect = 1e-77
 Identities = 148/236 (62%), Positives = 186/236 (78%), Gaps = 3/236 (1%)
 Frame = +2

Query: 95  TIRHYHLRSRGFVEETGWNN-GLLLPYSVQAKDSKTNFSSVGHEFLRRFQSPTIFLKVAC 271
           TI H+ +R +GF+E   W + G L P+S Q KD + + SS+G  FLRRFQSPTIFLKV+C
Sbjct: 1   TISHHQMRKQGFLEGNKWQSWGQLHPFSAQTKDLRADVSSIGQGFLRRFQSPTIFLKVSC 60

Query: 272 EGDWLLPIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITERIVNT 451
           +GD+LLPIIVGEF++EKLI  LRED   +CP++FQF++++  KLGY+V MV+ITERIVNT
Sbjct: 61  DGDFLLPIIVGEFSVEKLIDTLREDAIVDCPNQFQFVRDLVGKLGYKVNMVKITERIVNT 120

Query: 452 YYARIFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQRGKNA 625
           Y+ARI+F KPGE  + + DARPSDAINVAK CKVPIYVNKQI+LTDA  I+YG  R ++ 
Sbjct: 121 YFARIYFSKPGENNIQSVDARPSDAINVAKLCKVPIYVNKQIILTDAIRIIYGMGRARDT 180

Query: 626 KSVYDVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKLQTPRYE 793
           KSVYDV LDSA +G DLLAEEL L+R++  AI EERY DA + RDKL KL+  R+E
Sbjct: 181 KSVYDVVLDSAADGPDLLAEELDLVRNMSLAIKEERYNDAALWRDKLMKLRESRHE 236


>ref|XP_002530645.1| conserved hypothetical protein [Ricinus communis]
           gi|223529818|gb|EEF31753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score =  278 bits (712), Expect = 2e-72
 Identities = 141/241 (58%), Positives = 183/241 (75%), Gaps = 6/241 (2%)
 Frame = +2

Query: 89  SKTIRHYHLRSRGFVEETGWN-NGLLLPYSVQAKDSKTNFSSVGHEFLRRFQSPTIFLKV 265
           S+T  HY +R +GF EET W   G   P+S   ++S+ + S VG+EFLRRFQSPTIFLKV
Sbjct: 65  SETALHYRMRRQGFQEETTWRLPGRWSPFSAMIRESRRDTSFVGYEFLRRFQSPTIFLKV 124

Query: 266 ACEGDWLLPIIVGEFAIEKLIHALRE---DDDGECPSEFQFLKNVADKLGYEVKMVRITE 436
           +C+GD+LLPIIVGEFAIEKLI ALR    +DDG+CP +FQ ++N+ D+LGYEVKMVRITE
Sbjct: 125 SCDGDFLLPIIVGEFAIEKLIDALRGGDGNDDGDCPDQFQLVRNLVDRLGYEVKMVRITE 184

Query: 437 RIVNTYYARIFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQ 610
           R+ NTY+AR+F  KPGE  +++ DARPSDAIN+A RCK PI+V+KQIV TDA  I YG  
Sbjct: 185 RVANTYFARVFLSKPGENEVVSIDARPSDAINMAHRCKAPIHVSKQIVFTDAIRISYGMG 244

Query: 611 RGKNAKSVYDVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKLQTPRY 790
           R  + K  YDV+LDSA +G D LAEEL L+R++ +A+ EER+ DA + RDKL +L+   +
Sbjct: 245 RVHDRKPTYDVTLDSAADGPDSLAEELELVRNMNSAVKEERFNDAAMWRDKLMQLRQSMH 304

Query: 791 E 793
           +
Sbjct: 305 D 305


>ref|XP_002327627.1| predicted protein [Populus trichocarpa] gi|222836712|gb|EEE75105.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  269 bits (687), Expect = 1e-69
 Identities = 136/232 (58%), Positives = 177/232 (76%), Gaps = 5/232 (2%)
 Frame = +2

Query: 113 LRSRGFVEETGWNNG--LLLPYSVQA-KDSKTNFSSVGHEFLRRFQSPTIFLKVACEGDW 283
           +R +GF EE  W++   L+ P+ +Q  K+++ N   +GH FLR FQSPTIFLKV+C+GD+
Sbjct: 1   MRKQGFQEEVRWHSSGKLVFPFGLQERKEARPNTGLLGHGFLRGFQSPTIFLKVSCDGDF 60

Query: 284 LLPIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITERIVNTYYAR 463
           +LPIIVGEFAIEKLI  ++ DD+  C  +FQ + NVA++LGY+VKMVRITER+ NTY+AR
Sbjct: 61  VLPIIVGEFAIEKLIDGIQGDDNAVCADQFQLVGNVAEELGYDVKMVRITERVANTYFAR 120

Query: 464 IFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQRGKNAKSVY 637
           + F KPGEK +L+ DARPSDAINVA RCK PIY++KQIVLTDA  I YG  R +N+K +Y
Sbjct: 121 LCFSKPGEKDILSVDARPSDAINVASRCKAPIYISKQIVLTDAIRIGYGVGRVRNSKPIY 180

Query: 638 DVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKLQTPRYE 793
           DVSLDSA +G D L EEL L+R++  A+ EERY DA + RDKL +L+  R E
Sbjct: 181 DVSLDSAADGPDSLVEELDLVRNMNLAVKEERYTDAAMWRDKLMELRKSRQE 232


>ref|XP_003635601.1| PREDICTED: uncharacterized protein LOC100855204 [Vitis vinifera]
          Length = 224

 Score =  266 bits (679), Expect = 1e-68
 Identities = 133/211 (63%), Positives = 168/211 (79%), Gaps = 3/211 (1%)
 Frame = +2

Query: 113 LRSRGFVEETGWNN-GLLLPYSVQAKDSKTNFSSVGHEFLRRFQSPTIFLKVACEGDWLL 289
           +R +GF+E   W + G L P+S Q KD + + SS+G  FLRRFQSPTIFLKV+C+GD+LL
Sbjct: 1   MRKQGFLEGNKWQSWGQLHPFSAQTKDLRADVSSIGQGFLRRFQSPTIFLKVSCDGDFLL 60

Query: 290 PIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITERIVNTYYARIF 469
           PIIVGEF++EKLI  LRED   +CP++FQF++++  KLGY+V MV+ITERIVNTY+ARI+
Sbjct: 61  PIIVGEFSVEKLIDTLREDAIVDCPNQFQFVRDLVGKLGYKVNMVKITERIVNTYFARIY 120

Query: 470 FCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQRGKNAKSVYDV 643
           F KPGE  + + DARPSDAINVAK CKVPIYVNKQI+LTDA  I+YG  R ++ KSVYDV
Sbjct: 121 FSKPGENNIQSVDARPSDAINVAKLCKVPIYVNKQIILTDAIRIIYGMGRARDTKSVYDV 180

Query: 644 SLDSAEEGTDLLAEELHLIRSLYTAITEERY 736
            LDSA +G DLLAEEL L+R++  AI EE +
Sbjct: 181 VLDSAADGPDLLAEELDLVRNMSLAIKEESF 211


>gb|ABK26915.1| unknown [Picea sitchensis]
          Length = 352

 Score =  254 bits (650), Expect = 3e-65
 Identities = 136/241 (56%), Positives = 179/241 (74%), Gaps = 11/241 (4%)
 Frame = +2

Query: 89  SKTIRHYHLRSRGFVEETG-WNNGLLLPYSV-QAKDSKTN-FSSVGHEFLRRFQSPTIFL 259
           ++ ++H  LR +G    +G W++   L   + +AK+S+ +  S + H  LRRF++PTIFL
Sbjct: 105 TELLKHQQLRKQGLSGASGLWHSSDQLTTPINEAKESEADQISLIEHGLLRRFRNPTIFL 164

Query: 260 KVACEGDWLLPIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITER 439
           ++AC+G+ LLPIIVGEFAI KLI AL ED+ G  P+ FQ ++++   LGYEV+M+RITER
Sbjct: 165 RIACDGNLLLPIIVGEFAIGKLIDALHEDEKGGRPNPFQLMRDLVGTLGYEVRMIRITER 224

Query: 440 IVNTYYARIFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDAI--VYGTQ- 610
           +VNTYYARI+  KPGEK ML+ DARPSDAIN+AKRCKVPIYVNK IV TDAI  VYGT  
Sbjct: 225 VVNTYYARIYIGKPGEKVMLSVDARPSDAINLAKRCKVPIYVNKAIVTTDAIKLVYGTPQ 284

Query: 611 -----RGKNAKSVYDVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKL 775
                RG + KS YD+SLDSA EG DL+AEEL L+R++  A+ EERY+DA + RD+L KL
Sbjct: 285 ILGKWRGNSRKSSYDLSLDSAAEGPDLIAEELILVRNMLIAVVEERYKDAALWRDELNKL 344

Query: 776 Q 778
           +
Sbjct: 345 R 345


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