BLASTX nr result
ID: Coptis25_contig00006843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006843
(1158 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera] 72 2e-49
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3... 74 4e-42
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera] 62 5e-35
emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera] 62 5e-35
ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [S... 61 4e-34
>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
Length = 563
Score = 72.4 bits (176), Expect(4) = 2e-49
Identities = 32/55 (58%), Positives = 45/55 (81%)
Frame = -2
Query: 353 LAETNEVGGDMFDILGWWKINASRYRILSLVARDVLALPISSVASESAFSTGGGV 189
L+E+NE D FDIL WWK+N S++++L+ +A+DVLA+PIS+VA ES FSTGG +
Sbjct: 452 LSESNERVDDGFDILHWWKVNCSKFKVLAQIAKDVLAIPISTVAFESKFSTGGRI 506
Score = 69.3 bits (168), Expect(4) = 2e-49
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = -3
Query: 697 YW-DMDKINILLYVGVVLDPRFKMKYVSYSFKQLYEETKANDETKKVKDALVALYEWYVG 521
YW ++ + N+LLYV VVLDPR+K+K+V + F QLY++ A D + +V D L LY+ Y
Sbjct: 340 YWGNLKRSNLLLYVVVVLDPRYKLKFVQFCFDQLYDKEVAKDMSTRVVDVLRKLYDEYRL 399
Query: 520 HYPSSNQPPIDVNVSQTASRMDVDDDEQDPTILAAEFQQHLLEEENLQNKS 368
Y + ++ + + + + EQD F +HL EE N+++KS
Sbjct: 400 LYFHNEV----CDLEEFSQPKESELGEQDDLNFVYTFTRHLYEEHNVESKS 446
Score = 65.5 bits (158), Expect(4) = 2e-49
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = -1
Query: 198 GGRILDPFCSSLAPNTVEALICAQDWLRSPSIPINLRQSMDDIEQYDK 55
GGRILDPF SSL+P TVE LIC Q+ LRS IPINLR++M++IE ++
Sbjct: 503 GGRILDPFRSSLSPKTVEMLICGQNRLRSSPIPINLRETMEEIENLEQ 550
Score = 57.4 bits (137), Expect(4) = 2e-49
Identities = 23/56 (41%), Positives = 40/56 (71%)
Frame = -2
Query: 881 PTLTDWNSARLFVKFLRVFYKATLRFSGSRYVTSNNFFSEILIVQKKLIQFNGSED 714
P + DW++AR+FVKFL++F+ TLR SGS + TSN +F ++ +++ + ++ S D
Sbjct: 268 PLVEDWDNARVFVKFLKIFFDVTLRISGSLFTTSNAYFHKLCLIRNLIRKYLKSND 323
>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
Oligoribonuclease [Medicago truncatula]
Length = 1551
Score = 73.6 bits (179), Expect(4) = 4e-42
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = -2
Query: 353 LAETNEVGGDMFDILGWWKINASRYRILSLVARDVLALPISSVASESAFSTGGGV 189
L+E E FDIL WWK+N+++Y L L+ARD+LA+PIS+VASESAFSTGG V
Sbjct: 1476 LSEPREKKNPDFDILNWWKVNSTKYPTLGLIARDILAMPISTVASESAFSTGGRV 1530
Score = 64.7 bits (156), Expect(4) = 4e-42
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = -1
Query: 1140 AVRYVRSSPSRLARFKECVKEEQIECTKFLCLDVATRWNATFMMLEVAEKFQSAF 976
AVRYVR S SRL RFK C+KE +I+ + D TRWN+T++MLE A KFQ AF
Sbjct: 1241 AVRYVRGSASRLDRFKICIKEARIQDKSTVQYDCPTRWNSTYLMLESALKFQKAF 1295
Score = 52.4 bits (124), Expect(4) = 4e-42
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Frame = -3
Query: 697 YW-DMDKINILLYVGVVLDPRFKMKYVSYSFKQLYEETKANDETKKVKDALVALYEWYVG 521
YW D+ K+N+L+++ V+ PR K +++++ + YE+ A+ KVK+AL ++E Y
Sbjct: 1387 YWGDVAKMNMLVFIAVIFYPRRKFQFINWGLNKYYEKEVADSLCDKVKEALNKMFESY-- 1444
Query: 520 HYPSSNQPPIDVNVSQTASRMDVDDD-----EQDPTILAAEFQQHLLEEENLQN 374
S+ +++ DVDD +QDP + E +L E +N
Sbjct: 1445 --------------SRFSNKEDVDDQFEKDMDQDPNLSQTEVDIYLSEPREKKN 1484
Score = 49.3 bits (116), Expect(4) = 4e-42
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = -2
Query: 881 PTLTDWNSARLFVKFLRVFYKATLRFSGSRYVTSNNFFSE 762
P DW++A+ FVKFL++F++ T + SGS YVTS+ +F E
Sbjct: 1313 PNNVDWDNAKCFVKFLKLFFEITKKVSGSTYVTSSTYFME 1352
>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
Length = 1266
Score = 62.4 bits (150), Expect(5) = 5e-35
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = -2
Query: 320 FDILGWWKINASRYRILSLVARDVLALPISSVASESAFSTGG 195
FD+L WWK N +Y L ++ RD+ A+P+S+VASESAFSTGG
Sbjct: 654 FDVLSWWKTNGIKYPTLQMIVRDIYAIPVSTVASESAFSTGG 695
Score = 55.1 bits (131), Expect(5) = 5e-35
Identities = 21/55 (38%), Positives = 38/55 (69%)
Frame = -1
Query: 1140 AVRYVRSSPSRLARFKECVKEEQIECTKFLCLDVATRWNATFMMLEVAEKFQSAF 976
+V Y ++PSR+ +F++ ++ ++ C K LCLD TRWN+T++ML +A ++ F
Sbjct: 394 SVAYWSATPSRVEKFEDAARQLRLPCNKKLCLDCKTRWNSTYLMLSIAITYKDVF 448
Score = 40.8 bits (94), Expect(5) = 5e-35
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -2
Query: 881 PTLTDWNSARLFVKFLRVFYKATLRFSGSRYVTSNNFFSEILIVQKKL 738
P+ +WN AR + L++FY T FSG Y T+N FF ++ +++ L
Sbjct: 462 PSEEEWNLAREICERLKLFYNITKLFSGRNYPTANTFFIKVCEIKEAL 509
Score = 39.7 bits (91), Expect(5) = 5e-35
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = -3
Query: 697 YWDMDKINILLYVGVVLDPRFKMKYVSYSFKQLYEETKANDETKKVKDALVALYEWYVGH 518
YW +I++ + VVLDPR+KMK + + F +Y ++A+ E K++ L Y
Sbjct: 534 YWS--GCHIVMAIAVVLDPRYKMKILEFYFPIMY-GSEASSEIGKIRQLCYDLLSEYQSK 590
Query: 517 YPSSNQPPIDVNVSQTASRMDVDDDEQDP 431
Q S ++ ++ DEQDP
Sbjct: 591 -SKMGQQTSSHGASSVSNLFELTYDEQDP 618
Score = 37.4 bits (85), Expect(5) = 5e-35
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -1
Query: 198 GGRILDPFCSSLAPNTVEALICAQDWL 118
GGR++ S L PNT+EAL+CAQ WL
Sbjct: 694 GGRMVSKHRSRLHPNTLEALMCAQSWL 720
>emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]
Length = 1068
Score = 62.4 bits (150), Expect(5) = 5e-35
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = -2
Query: 320 FDILGWWKINASRYRILSLVARDVLALPISSVASESAFSTGG 195
FD+L WWK N +Y L ++ RD+ A+P+S+VASESAFSTGG
Sbjct: 626 FDVLSWWKTNGIKYPTLQMIVRDIYAIPVSTVASESAFSTGG 667
Score = 55.1 bits (131), Expect(5) = 5e-35
Identities = 21/55 (38%), Positives = 38/55 (69%)
Frame = -1
Query: 1140 AVRYVRSSPSRLARFKECVKEEQIECTKFLCLDVATRWNATFMMLEVAEKFQSAF 976
+V Y ++PSR+ +F++ ++ ++ C K LCLD TRWN+T++ML +A ++ F
Sbjct: 366 SVAYWSATPSRVEKFEDAARQLRLPCNKKLCLDCKTRWNSTYLMLSIAITYKDVF 420
Score = 40.8 bits (94), Expect(5) = 5e-35
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -2
Query: 881 PTLTDWNSARLFVKFLRVFYKATLRFSGSRYVTSNNFFSEILIVQKKL 738
P+ +WN AR + L++FY T FSG Y T+N FF ++ +++ L
Sbjct: 434 PSEEEWNLAREICERLKLFYNITKLFSGXNYPTANTFFIKVCEIKEAL 481
Score = 39.7 bits (91), Expect(5) = 5e-35
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = -3
Query: 697 YWDMDKINILLYVGVVLDPRFKMKYVSYSFKQLYEETKANDETKKVKDALVALYEWYVGH 518
YW +I++ + VVLDPR+KMK + + F +Y ++A+ E K++ L Y
Sbjct: 506 YWS--GCHIVMAIAVVLDPRYKMKILEFYFPIMY-GSEASSEIGKIRQLCYDLLSEYQSK 562
Query: 517 YPSSNQPPIDVNVSQTASRMDVDDDEQDP 431
Q S ++ ++ DEQDP
Sbjct: 563 -SKMGQQTSSHGASSVSNLFELTYDEQDP 590
Score = 37.4 bits (85), Expect(5) = 5e-35
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -1
Query: 198 GGRILDPFCSSLAPNTVEALICAQDWL 118
GGR++ S L PNT+EAL+CAQ WL
Sbjct: 666 GGRMVSKHRSRLHPNTLEALMCAQSWL 692
>ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [Sorghum bicolor]
gi|241927612|gb|EES00757.1| hypothetical protein
SORBIDRAFT_03g015311 [Sorghum bicolor]
Length = 558
Score = 61.2 bits (147), Expect(5) = 4e-34
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = -2
Query: 320 FDILGWWKINASRYRILSLVARDVLALPISSVASESAFSTGGGV 189
FDIL WW+I++++Y ++S +ARDVLA P S+VASESAFST G +
Sbjct: 484 FDILQWWRIHSTKYPVVSRMARDVLAAPASTVASESAFSTSGRI 527
Score = 53.9 bits (128), Expect(5) = 4e-34
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = -1
Query: 1140 AVRYVRSSPSRLARFKECVKEEQIECTKFLCLDVATRWNATFMMLEVAEKFQSAF 976
+V+Y+RSS +R RF+E + + I C K LDV TRWN+T++ML+ A ++++ F
Sbjct: 232 SVKYIRSSQARKQRFEEIIVQLGISCDKRPSLDVPTRWNSTYLMLKSAIEYRAVF 286
Score = 44.7 bits (104), Expect(5) = 4e-34
Identities = 36/110 (32%), Positives = 52/110 (47%)
Frame = -3
Query: 697 YWDMDKINILLYVGVVLDPRFKMKYVSYSFKQLYEETKANDETKKVKDALVALYEWYVGH 518
YWD+ + I V VVLDPRFK+ +S+ + + K T+ VK L L+ Y
Sbjct: 372 YWDICLLQIC--VPVVLDPRFKLSLLSFRLNAGFGD-KGPAYTEMVKATLQNLFSAYSSM 428
Query: 517 YPSSNQPPIDVNVSQTASRMDVDDDEQDPTILAAEFQQHLLEEENLQNKS 368
P SN ++ N D DE D A+F+QHL ++ + KS
Sbjct: 429 APDSNYSELEPN--------DGSIDEDD---CWADFEQHLAAQKRKRVKS 467
Score = 38.1 bits (87), Expect(5) = 4e-34
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -2
Query: 881 PTLTDWNSARLFVKFLRVFYKATLRFSGSRYVTSNNFFSEILIVQKKL 738
P+ TDWN A L + FY AT SG+ Y T+N+ F + V+ K+
Sbjct: 300 PSNTDWNMAYLLCNVFKPFYDATNAVSGTLYPTANHCFHVLWEVKGKI 347
Score = 34.3 bits (77), Expect(5) = 4e-34
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 195 GRILDPFCSSLAPNTVEALICAQDWLRS 112
GRI+ + S L V+AL+C QDWLR+
Sbjct: 525 GRIVSDYRSRLTSKRVQALVCLQDWLRA 552