BLASTX nr result

ID: Coptis25_contig00006836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006836
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198622.1| uncharacterized protein [Arabidopsis thaliana] ...   175   4e-42
ref|XP_004140742.1| PREDICTED: uncharacterized protein LOC101208...   174   5e-42
ref|XP_002301718.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_002870875.1| predicted protein [Arabidopsis lyrata subsp....   172   3e-41
ref|NP_001236321.1| uncharacterized protein LOC100526944 [Glycin...   171   5e-41

>ref|NP_198622.1| uncharacterized protein [Arabidopsis thaliana]
           gi|61742751|gb|AAX55196.1| hypothetical protein
           At5g38060 [Arabidopsis thaliana]
           gi|71905567|gb|AAZ52761.1| expressed protein
           [Arabidopsis thaliana] gi|332006879|gb|AED94262.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 134

 Score =  175 bits (443), Expect = 4e-42
 Identities = 76/117 (64%), Positives = 94/117 (80%), Gaps = 2/117 (1%)
 Frame = +3

Query: 60  PKPIIQIHVFG--KTKKTHSQVIIIRCTNNNNNSKQCLKTCKNCKTQFDPSLNNPNACRF 233
           PK +I  H     KT K +S+    +CT ++++  + L+TCKNCKTQFDP LNNP ACRF
Sbjct: 18  PKTLIHSHSLKTLKTPKLNSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRF 77

Query: 234 HTSHFGGETRRKFESVYSGGTMNTPDAGKVFQYWHCCGSEDPFDIGCTAAPHLSYDD 404
           HT+HFGGET+RKFESVY+GGTM+TP++GKV QYWHCCGSEDPFD GCTA+PH +YDD
Sbjct: 78  HTAHFGGETKRKFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 134


>ref|XP_004140742.1| PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus]
           gi|449518314|ref|XP_004166187.1| PREDICTED:
           uncharacterized LOC101208221 [Cucumis sativus]
          Length = 137

 Score =  174 bits (442), Expect = 5e-42
 Identities = 77/115 (66%), Positives = 95/115 (82%), Gaps = 3/115 (2%)
 Frame = +3

Query: 69  IIQIHVFGKTKKTHS---QVIIIRCTNNNNNSKQCLKTCKNCKTQFDPSLNNPNACRFHT 239
           +++     +T K  S   +++ IRC+ N+NN +  L+TC+NCK QFDPSLN+P ACRFHT
Sbjct: 23  VLRSDALNRTSKLSSNSPKILTIRCSANSNN-QLTLRTCRNCKAQFDPSLNHPRACRFHT 81

Query: 240 SHFGGETRRKFESVYSGGTMNTPDAGKVFQYWHCCGSEDPFDIGCTAAPHLSYDD 404
           SHFGGET+RKFESV+SGGTM+TPD+GKVFQYWHCCGSEDPFD GCTA+PH SYDD
Sbjct: 82  SHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD 136


>ref|XP_002301718.1| predicted protein [Populus trichocarpa] gi|222843444|gb|EEE80991.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  174 bits (442), Expect = 5e-42
 Identities = 76/94 (80%), Positives = 85/94 (90%)
 Frame = +3

Query: 123 IIRCTNNNNNSKQCLKTCKNCKTQFDPSLNNPNACRFHTSHFGGETRRKFESVYSGGTMN 302
           I  C+ N NN+K  L+TCKNCKTQFDPSLN+P ACRFHTSHFGGET+RKFESVY+GGTM+
Sbjct: 39  ITHCSINQNNNKT-LRTCKNCKTQFDPSLNHPRACRFHTSHFGGETKRKFESVYTGGTMS 97

Query: 303 TPDAGKVFQYWHCCGSEDPFDIGCTAAPHLSYDD 404
           TPD+G+VFQYWHCCGSEDPFD GCTAAPH SYDD
Sbjct: 98  TPDSGQVFQYWHCCGSEDPFDPGCTAAPHSSYDD 131


>ref|XP_002870875.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316711|gb|EFH47134.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 133

 Score =  172 bits (436), Expect = 3e-41
 Identities = 73/117 (62%), Positives = 95/117 (81%), Gaps = 2/117 (1%)
 Frame = +3

Query: 60  PKPIIQIHVFG--KTKKTHSQVIIIRCTNNNNNSKQCLKTCKNCKTQFDPSLNNPNACRF 233
           PK +I  H     K  K +S+  +++C+ ++++  + L+TCKNCKTQFDP LNNP ACRF
Sbjct: 17  PKTLIHSHSLKTLKNPKLNSRKFLLQCSVSSSDGPKTLRTCKNCKTQFDPLLNNPRACRF 76

Query: 234 HTSHFGGETRRKFESVYSGGTMNTPDAGKVFQYWHCCGSEDPFDIGCTAAPHLSYDD 404
           HT+H+GGET+RKFESVY+GGTM+TP++GKV QYWHCCGSEDPFD GCTA+PH +YDD
Sbjct: 77  HTAHYGGETKRKFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 133


>ref|NP_001236321.1| uncharacterized protein LOC100526944 [Glycine max]
           gi|255631199|gb|ACU15965.1| unknown [Glycine max]
          Length = 134

 Score =  171 bits (434), Expect = 5e-41
 Identities = 73/91 (80%), Positives = 82/91 (90%)
 Frame = +3

Query: 132 CTNNNNNSKQCLKTCKNCKTQFDPSLNNPNACRFHTSHFGGETRRKFESVYSGGTMNTPD 311
           C++ +  +   LKTCKNCKTQFDPSLN+P+ACRFHTSHFGGET+RKFESVY GGTMNTPD
Sbjct: 44  CSSLSQKNSINLKTCKNCKTQFDPSLNHPHACRFHTSHFGGETKRKFESVYEGGTMNTPD 103

Query: 312 AGKVFQYWHCCGSEDPFDIGCTAAPHLSYDD 404
           +GKVFQYWHCCGSEDPFD GCTA+PH SYDD
Sbjct: 104 SGKVFQYWHCCGSEDPFDPGCTASPHSSYDD 134


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