BLASTX nr result

ID: Coptis25_contig00006835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006835
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877784.1| hypothetical protein ARALYDRAFT_485453 [Arab...   134   3e-29
gb|AFK39013.1| unknown [Lotus japonicus]                              132   2e-28
ref|XP_004142815.1| PREDICTED: uncharacterized protein LOC101208...   130   6e-28
ref|XP_002274615.1| PREDICTED: uncharacterized protein LOC100243...   130   6e-28
ref|NP_566942.1| uncharacterized protein [Arabidopsis thaliana] ...   130   6e-28

>ref|XP_002877784.1| hypothetical protein ARALYDRAFT_485453 [Arabidopsis lyrata subsp.
           lyrata] gi|297323622|gb|EFH54043.1| hypothetical protein
           ARALYDRAFT_485453 [Arabidopsis lyrata subsp. lyrata]
          Length = 188

 Score =  134 bits (337), Expect = 3e-29
 Identities = 86/183 (46%), Positives = 109/183 (59%), Gaps = 22/183 (12%)
 Frame = -3

Query: 897 MGWGALRNIIVRPLTRSIFT-----HSPIRFPAKISNG-----------------PFVPP 784
           MG+GA+R+I  RPL+R++ +     +S   FPAKI                    P++P 
Sbjct: 1   MGFGAIRSIF-RPLSRTLVSRAVANYSSAPFPAKIPAAKPELCSFFGGSMTHLRLPWIPM 59

Query: 783 ASQFDSIRQSLLFSYKGLHSLTETRYPKRRPGFTNRKKRTTIKPPGPYALVQHTPQESIL 604
           A+ F S+            SLT+TR PKRRP    ++KR+ +KPPGPYA VQ+TP + I 
Sbjct: 60  ANHFHSL------------SLTDTRLPKRRPMTHPKRKRSKLKPPGPYAYVQYTPGQPIS 107

Query: 603 ANKPHEGSVKNRNANEKKRIAQRKAFIKSEAKKRKVLVQEAXXXXXXXXXXXKMAAVARD 424
           +N P+EGSVK RNA  KKRIAQR+AFI SE KKR+ LVQEA           KMAAVARD
Sbjct: 108 SNNPNEGSVKRRNA--KKRIAQRRAFILSEKKKRQALVQEAKRKKRIKQVERKMAAVARD 165

Query: 423 RAW 415
           RAW
Sbjct: 166 RAW 168


>gb|AFK39013.1| unknown [Lotus japonicus]
          Length = 175

 Score =  132 bits (331), Expect = 2e-28
 Identities = 79/159 (49%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
 Frame = -3

Query: 888 GALRNIIVRPLTRSIFTHSPIRFPAKISNGPFVPPASQFDSIRQSLLFSYKG-LHSLTET 712
           GALRNI VRPL+ S    SP   P++I   P      +        LF  +   HSLT+T
Sbjct: 5   GALRNI-VRPLSLS----SPRTLPSQICTNPTTTALLESPCKLPQWLFPLRNHFHSLTDT 59

Query: 711 RYPKRRPGFTNRKKRTTIKPPGPYALVQHTPQESILANKPHEGSVKNRNANEKKRIAQRK 532
           R+PKRRP    R+KR +++PPGPYA VQ+TP E IL NKP+EGSVK R  NEKKR+ Q +
Sbjct: 60  RFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRR--NEKKRVRQHR 117

Query: 531 AFIKSEAKKRKVLVQEAXXXXXXXXXXXKMAAVARDRAW 415
           AF+ +E KKRK  +QEA           KMAAVAR+R W
Sbjct: 118 AFVLAERKKRKAQLQEANRKKSIKKVERKMAAVAREREW 156


>ref|XP_004142815.1| PREDICTED: uncharacterized protein LOC101208398 [Cucumis sativus]
           gi|449504261|ref|XP_004162297.1| PREDICTED:
           uncharacterized protein LOC101227898 [Cucumis sativus]
          Length = 182

 Score =  130 bits (326), Expect = 6e-28
 Identities = 83/166 (50%), Positives = 99/166 (59%), Gaps = 5/166 (3%)
 Frame = -3

Query: 897 MGWGALRNIIVRPLTRSIFTH---SPIRFPAKI--SNGPFVPPASQFDSIRQSLLFSYKG 733
           MG G LR+II RPLTR   +H   SP  FP+    S   F  P++               
Sbjct: 1   MGLGILRSII-RPLTRISRSHPFSSPTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANH 59

Query: 732 LHSLTETRYPKRRPGFTNRKKRTTIKPPGPYALVQHTPQESILANKPHEGSVKNRNANEK 553
            HSLTETR PKRRP +  R+KR +++PPGPYA V +TP + IL N+P+EGSVK R  NEK
Sbjct: 60  FHSLTETRLPKRRPSYKPRRKRASLRPPGPYAWVPYTPGQPILPNQPNEGSVKRR--NEK 117

Query: 552 KRIAQRKAFIKSEAKKRKVLVQEAXXXXXXXXXXXKMAAVARDRAW 415
           KRI   +AFI SE KKRK  VQEA           KMAAVAR+RAW
Sbjct: 118 KRIRLHRAFIMSERKKRKAQVQEANKKKLVMRVERKMAAVARERAW 163


>ref|XP_002274615.1| PREDICTED: uncharacterized protein LOC100243711 [Vitis vinifera]
           gi|147794656|emb|CAN73508.1| hypothetical protein
           VITISV_007909 [Vitis vinifera]
           gi|297735072|emb|CBI17434.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  130 bits (326), Expect = 6e-28
 Identities = 82/168 (48%), Positives = 105/168 (62%), Gaps = 7/168 (4%)
 Frame = -3

Query: 897 MGWGALRNIIVRPLTRSIFTHSPIRFPAKISNGPFVP-PASQFDSIRQSLLFSYKGL--- 730
           MG GALR+II RPL+R++ T +   +    S G   P P   F  +  SL +  + +   
Sbjct: 1   MGLGALRSII-RPLSRTLVTRTSTLYTT--SFGASSPSPRPDFRFVSGSLYWLPRWVPVA 57

Query: 729 ---HSLTETRYPKRRPGFTNRKKRTTIKPPGPYALVQHTPQESILANKPHEGSVKNRNAN 559
              HSLT+TR+PKRRP    R+KR +++PPGPYA VQ+ P E IL N+P+EGSVK R   
Sbjct: 58  NHFHSLTDTRFPKRRPSDKPRRKRASLRPPGPYAWVQYVPGERILPNRPNEGSVKGR--K 115

Query: 558 EKKRIAQRKAFIKSEAKKRKVLVQEAXXXXXXXXXXXKMAAVARDRAW 415
           EKKR+  R+AFI SEAKKRK  +QEA           KMAAVAR+RAW
Sbjct: 116 EKKRMRLRRAFILSEAKKRKTQLQEAKRKKNIKGVERKMAAVARERAW 163


>ref|NP_566942.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6562253|emb|CAB62623.1| hypothetical protein
           [Arabidopsis thaliana] gi|98960951|gb|ABF58959.1|
           At3g51010 [Arabidopsis thaliana]
           gi|332645216|gb|AEE78737.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 188

 Score =  130 bits (326), Expect = 6e-28
 Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 22/183 (12%)
 Frame = -3

Query: 897 MGWGALRNIIVRPLTRSIFTHSPIRFPAKISNG----------------------PFVPP 784
           MG+GA+R+I+ RPL+R++ + + + + +   N                       P++P 
Sbjct: 1   MGFGAIRSIL-RPLSRTLVSRAVVNYSSAPFNATIPAAKPELCSFFGGSMTHLRLPWIPM 59

Query: 783 ASQFDSIRQSLLFSYKGLHSLTETRYPKRRPGFTNRKKRTTIKPPGPYALVQHTPQESIL 604
           A+ F S+            SLT+TR PKRRP    ++KR+ +KPPGPYA VQ+TP + I 
Sbjct: 60  ANHFHSL------------SLTDTRLPKRRPMTHPKRKRSKLKPPGPYAYVQYTPGQPIS 107

Query: 603 ANKPHEGSVKNRNANEKKRIAQRKAFIKSEAKKRKVLVQEAXXXXXXXXXXXKMAAVARD 424
           +N P+EGSVK RNA  KKRI QR+AFI SE KKR+ LVQEA           KMAAVARD
Sbjct: 108 SNNPNEGSVKRRNA--KKRIGQRRAFILSEKKKRQALVQEAKRKKRIKQVERKMAAVARD 165

Query: 423 RAW 415
           RAW
Sbjct: 166 RAW 168


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