BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006824
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19139.3| unnamed protein product [Vitis vinifera]              155   5e-36
ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-contain...   155   5e-36
ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communi...   140   2e-31
ref|XP_003638779.1| WD-40 repeat family [Medicago truncatula] gi...   137   1e-30
ref|XP_002307391.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30

>emb|CBI19139.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  155 bits (391), Expect = 5e-36
 Identities = 85/161 (52%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
 Frame = -1

Query: 477 MAQFQNDDLEYA-DEYYG-TEFEDHAFEENQQQQLQNPXXXXXXXXXXDMXXXXXXXXXX 304
           MA+FQN DLEY  D+YY  T+FE+ +F E   Q+  +P          +           
Sbjct: 1   MAEFQNPDLEYVVDDYYDMTDFEEDSFSETDPQR-NSPFEAFDSDVEDNFEMNK------ 53

Query: 303 XXXXXXXXXXXXXXXXXXPNTDTSALEARNGKDIQGIPWERMNYTRDKYRERRLNQYKNF 124
                             P TDTSALEARNGKDIQGIPWER+N+TRDKYRE RL QYKN+
Sbjct: 54  ------------------PKTDTSALEARNGKDIQGIPWERLNFTRDKYRETRLEQYKNY 95

Query: 123 ENLSRSHEQLDKEMKKVEGGGNFYEFQFNTRLVKSTIVHFQ 1
           ENLSR  E+L+K+ KK+E G  FY+FQFNTRLVKSTIVHFQ
Sbjct: 96  ENLSRPREELEKDCKKIEKGSTFYDFQFNTRLVKSTIVHFQ 136


>ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera]
          Length = 450

 Score =  155 bits (391), Expect = 5e-36
 Identities = 85/161 (52%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
 Frame = -1

Query: 477 MAQFQNDDLEYA-DEYYG-TEFEDHAFEENQQQQLQNPXXXXXXXXXXDMXXXXXXXXXX 304
           MA+FQN DLEY  D+YY  T+FE+ +F E   Q+  +P          +           
Sbjct: 1   MAEFQNPDLEYVVDDYYDMTDFEEDSFSETDPQR-NSPFEAFDSDVEDNFEMNK------ 53

Query: 303 XXXXXXXXXXXXXXXXXXPNTDTSALEARNGKDIQGIPWERMNYTRDKYRERRLNQYKNF 124
                             P TDTSALEARNGKDIQGIPWER+N+TRDKYRE RL QYKN+
Sbjct: 54  ------------------PKTDTSALEARNGKDIQGIPWERLNFTRDKYRETRLEQYKNY 95

Query: 123 ENLSRSHEQLDKEMKKVEGGGNFYEFQFNTRLVKSTIVHFQ 1
           ENLSR  E+L+K+ KK+E G  FY+FQFNTRLVKSTIVHFQ
Sbjct: 96  ENLSRPREELEKDCKKIEKGSTFYDFQFNTRLVKSTIVHFQ 136


>ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communis]
           gi|223546979|gb|EEF48476.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 447

 Score =  140 bits (352), Expect = 2e-31
 Identities = 81/160 (50%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
 Frame = -1

Query: 477 MAQFQNDDLEYA-DEYYGTEFEDHAFEENQQQQLQNPXXXXXXXXXXDMXXXXXXXXXXX 301
           MAQF NDDLEY  D+YY  +  D  F+  Q     +                        
Sbjct: 1   MAQFHNDDLEYVVDDYY--DVVDFEFDGPQVAPTHD------------------------ 34

Query: 300 XXXXXXXXXXXXXXXXXPNTDTSALEARNGKDIQGIPWERMNYTRDKYRERRLNQYKNFE 121
                              +DTSALEARNGKDIQGIPWER+N+TRDKYRE RL QYKN+E
Sbjct: 35  -FDSIDSDFEDDFDSGKAKSDTSALEARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYE 93

Query: 120 NLSRSHEQLDKEMKKVEGGGNFYEFQFNTRLVKSTIVHFQ 1
           NLSRS + L KE  +VE G NFY+FQFNTRLVKSTIVHFQ
Sbjct: 94  NLSRSRQDLHKECLQVEKGKNFYDFQFNTRLVKSTIVHFQ 133


>ref|XP_003638779.1| WD-40 repeat family [Medicago truncatula]
           gi|355504714|gb|AES85917.1| WD-40 repeat family
           [Medicago truncatula]
          Length = 457

 Score =  137 bits (345), Expect = 1e-30
 Identities = 79/160 (49%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
 Frame = -1

Query: 477 MAQFQNDDLEYADEYYGTEFEDHAFEENQQQQL-QNPXXXXXXXXXXDMXXXXXXXXXXX 301
           M QF N DLE+A+     EFE   FE+ +QQ + +NP          D            
Sbjct: 1   MDQFNNVDLEFANFEDYVEFEFSDFEDEEQQTVPENPPRRNTYNTDSDSDSDCEDDFQTS 60

Query: 300 XXXXXXXXXXXXXXXXXPNTDTSALEARNGKDIQGIPWERMNYTRDKYRERRLNQYKNFE 121
                              TDTSA EARNGKDIQGIPWE++NY+RD+YRE RL QYKN+E
Sbjct: 61  NV----------------KTDTSAFEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYE 104

Query: 120 NLSRSHEQLDKEMKKVEGGGNFYEFQFNTRLVKSTIVHFQ 1
            L+RS E LDKE  +VE G +FY+FQFNTRLVKSTI HFQ
Sbjct: 105 CLTRSREDLDKECLEVEKGNSFYDFQFNTRLVKSTIAHFQ 144


>ref|XP_002307391.1| predicted protein [Populus trichocarpa] gi|222856840|gb|EEE94387.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  135 bits (340), Expect = 4e-30
 Identities = 64/83 (77%), Positives = 71/83 (85%)
 Frame = -1

Query: 249 PNTDTSALEARNGKDIQGIPWERMNYTRDKYRERRLNQYKNFENLSRSHEQLDKEMKKVE 70
           P TDTSALEARNGKDIQGIPWER+N+TRDKYRE RL QYKN+ENLSR   +L KE  +VE
Sbjct: 14  PKTDTSALEARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSRPRFELHKECLEVE 73

Query: 69  GGGNFYEFQFNTRLVKSTIVHFQ 1
            G  FY+F+FNTRLVKSTIVHFQ
Sbjct: 74  KGKTFYDFEFNTRLVKSTIVHFQ 96