BLASTX nr result
ID: Coptis25_contig00006822
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006822
(1708 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing sub... 824 0.0
ref|XP_003531691.1| PREDICTED: katanin p60 ATPase-containing sub... 817 0.0
ref|XP_003531690.1| PREDICTED: katanin p60 ATPase-containing sub... 816 0.0
gb|AAP83637.1| katanin [Gossypium hirsutum] 813 0.0
ref|XP_004135829.1| PREDICTED: katanin p60 ATPase-containing sub... 811 0.0
>ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing subunit [Vitis vinifera]
gi|297743333|emb|CBI36200.3| unnamed protein product
[Vitis vinifera]
Length = 521
Score = 824 bits (2128), Expect = 0.0
Identities = 425/534 (79%), Positives = 455/534 (85%), Gaps = 2/534 (0%)
Frame = -3
Query: 1601 MVG--TLSGLQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLTRSKWMNCK 1428
MVG TL GLQDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPL R+KWMN K
Sbjct: 1 MVGPSTLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRTKWMNVK 60
Query: 1427 KALTEEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGSFVFQPLDEYPTSSNAPPI 1248
KAL+EE E+VKQLD ERRA KE G RRP+SPPI+TK SFVFQPLDEYPTSS AP +
Sbjct: 61 KALSEETEVVKQLDAERRAFKEIPGG---RRPSSPPISTKSSFVFQPLDEYPTSSGAP-M 116
Query: 1247 DDPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWXXXXXXXXXXXXXXXXXXXXGNNSR 1068
DDPDVW PP+RD SRR R+ Q+ +RK+ D TW +SR
Sbjct: 117 DDPDVWRPPSRDTTSRRSARSGQVGMRKTSQDGTWPRGSTRGGAAPRGGKSGA----SSR 172
Query: 1067 SGSGVRASTASGTXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDV 888
+ SGVRAST GDAE+GK+KR QYEGPDP+LAAMLERDV
Sbjct: 173 THSGVRASTTGRKGSSKSNTDKADSAN-----GDAEDGKSKRAQYEGPDPDLAAMLERDV 227
Query: 887 LETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLA 708
LETSPG+RWDDVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLA
Sbjct: 228 LETSPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLA 287
Query: 707 KAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGA 528
KAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGA
Sbjct: 288 KAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGA 347
Query: 527 SGEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIY 348
SGEHESSRRVKSELLVQVDGVNNSSTG+DG+RKIVMVLAATNFPWDIDEALRRRLEKRIY
Sbjct: 348 SGEHESSRRVKSELLVQVDGVNNSSTGEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIY 407
Query: 347 IPLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIA 168
IPLPNFESRKELIRINLKTVEVA DVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIA
Sbjct: 408 IPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIA 467
Query: 167 GKTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 6
GKTRDEIK+M K++++ DP+AMCDFEEAI+KVQRSVS ADIERHEKWFSEFGSA
Sbjct: 468 GKTRDEIKNMPKDEISNDPVAMCDFEEAITKVQRSVSQADIERHEKWFSEFGSA 521
>ref|XP_003531691.1| PREDICTED: katanin p60 ATPase-containing subunit-like isoform 2
[Glycine max]
Length = 525
Score = 817 bits (2110), Expect = 0.0
Identities = 418/533 (78%), Positives = 450/533 (84%), Gaps = 3/533 (0%)
Frame = -3
Query: 1595 GTLSGLQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLTRSKWMNCKKALT 1416
G+L+GLQ+HLKLARDYA EGLYDTSIIFFDGA+AQINKHLST++DPL R+KWMN KKAL+
Sbjct: 4 GSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVEDPLIRAKWMNVKKALS 63
Query: 1415 EEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGS--FVFQPLDEYPTSSNAP-PID 1245
EE E+VKQLD ERRA K+ N RRP+SPPI+ K S FVFQPLDEYPTSS+ P P+D
Sbjct: 64 EETEVVKQLDAERRAFKD---NPIGRRPSSPPISVKSSSSFVFQPLDEYPTSSSGPGPVD 120
Query: 1244 DPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWXXXXXXXXXXXXXXXXXXXXGNNSRS 1065
DPDVW PP+RD SRRP R Q+ RKS D W R
Sbjct: 121 DPDVWRPPSRDTTSRRPARPGQVGARKSAQDGAWARGATARTGAAGRGAKAGA---TGRV 177
Query: 1064 GSGVRASTASGTXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDVL 885
SG RAST +G GDAE+GK+K+LQYEGPDPELAAMLERDVL
Sbjct: 178 NSGTRASTTTGKKGGAASSGKANSLN-----GDAEDGKSKKLQYEGPDPELAAMLERDVL 232
Query: 884 ETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 705
ETSPG+RWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK
Sbjct: 233 ETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK 292
Query: 704 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 525
AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS
Sbjct: 293 AVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGAS 352
Query: 524 GEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYI 345
GEHESSRRVKSELLVQVDGV+NS+T +DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYI
Sbjct: 353 GEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYI 412
Query: 344 PLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 165
PLPNFESRKELIRINLKTVEVA DVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG
Sbjct: 413 PLPNFESRKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAG 472
Query: 164 KTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 6
KTRDEIK+MSK+D++KDP+A CDFEEA+ KVQRSVS ADIERHEKWF+EFGSA
Sbjct: 473 KTRDEIKNMSKDDISKDPVAKCDFEEALRKVQRSVSQADIERHEKWFTEFGSA 525
>ref|XP_003531690.1| PREDICTED: katanin p60 ATPase-containing subunit-like isoform 1
[Glycine max]
Length = 533
Score = 816 bits (2107), Expect = 0.0
Identities = 418/536 (77%), Positives = 450/536 (83%), Gaps = 6/536 (1%)
Frame = -3
Query: 1595 GTLSGLQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLTRSKWMNCKKALT 1416
G+L+GLQ+HLKLARDYA EGLYDTSIIFFDGA+AQINKHLST++DPL R+KWMN KKAL+
Sbjct: 4 GSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVEDPLIRAKWMNVKKALS 63
Query: 1415 EEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGS--FVFQPLDEYPTSSNAP-PID 1245
EE E+VKQLD ERRA K+ N RRP+SPPI+ K S FVFQPLDEYPTSS+ P P+D
Sbjct: 64 EETEVVKQLDAERRAFKD---NPIGRRPSSPPISVKSSSSFVFQPLDEYPTSSSGPGPVD 120
Query: 1244 DPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWXXXXXXXXXXXXXXXXXXXXGNNSRS 1065
DPDVW PP+RD SRRP R Q+ RKS D W R
Sbjct: 121 DPDVWRPPSRDTTSRRPARPGQVGARKSAQDGAWARGATARTGAAGRGAKAGA---TGRV 177
Query: 1064 GSGVRASTASGTXXXXXXXXXXXXXXXXXGI---GDAEEGKTKRLQYEGPDPELAAMLER 894
SG RAST +G GDAE+GK+K+LQYEGPDPELAAMLER
Sbjct: 178 NSGTRASTTTGKKGGAASSGKASKTDTAAAAVTNGDAEDGKSKKLQYEGPDPELAAMLER 237
Query: 893 DVLETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTL 714
DVLETSPG+RWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTL
Sbjct: 238 DVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTL 297
Query: 713 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 534
LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR
Sbjct: 298 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 357
Query: 533 GASGEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKR 354
GASGEHESSRRVKSELLVQVDGV+NS+T +DG+RKIVMVLAATNFPWDIDEALRRRLEKR
Sbjct: 358 GASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKR 417
Query: 353 IYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRK 174
IYIPLPNFESRKELIRINLKTVEVA DVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRK
Sbjct: 418 IYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRK 477
Query: 173 IAGKTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 6
IAGKTRDEIK+MSK+D++KDP+A CDFEEA+ KVQRSVS ADIERHEKWF+EFGSA
Sbjct: 478 IAGKTRDEIKNMSKDDISKDPVAKCDFEEALRKVQRSVSQADIERHEKWFTEFGSA 533
>gb|AAP83637.1| katanin [Gossypium hirsutum]
Length = 520
Score = 813 bits (2101), Expect = 0.0
Identities = 420/535 (78%), Positives = 455/535 (85%), Gaps = 3/535 (0%)
Frame = -3
Query: 1601 MVG-TLSGLQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLTRSKWMNCKK 1425
MVG +L+GLQDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPL RSKWMN KK
Sbjct: 1 MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60
Query: 1424 ALTEEIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGSFVFQPLDEYPTSSNAPPID 1245
AL+EE E+VKQLD ERR+ KE+ N RRP+SPPI K SFVFQPLDEYPTSS AP +D
Sbjct: 61 ALSEEAEVVKQLDAERRSFKEA---PNGRRPSSPPIHAKSSFVFQPLDEYPTSSGAP-MD 116
Query: 1244 DPDVWAPPNRDIGSRRPTRTNQMSIRKSPSDATWXXXXXXXXXXXXXXXXXXXXGNNSRS 1065
DPDVW PP+RD +RRP R Q +RKSP D G +SR+
Sbjct: 117 DPDVWRPPSRDTSTRRPARGGQAGMRKSPQDGI----SGRGSTRTAATGRGAKAGASSRT 172
Query: 1064 GSGVRASTAS--GTXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERD 891
+GVR ST GT GDAE+GK+KR QYEGPDP+LA MLERD
Sbjct: 173 NTGVRGSTTGKKGTGSGKPSKGDSAN-------GDAEDGKSKRSQYEGPDPDLAEMLERD 225
Query: 890 VLETSPGIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLL 711
VLET+PG+RWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLL
Sbjct: 226 VLETTPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLL 285
Query: 710 AKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRG 531
AKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RG
Sbjct: 286 AKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARG 345
Query: 530 ASGEHESSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRI 351
ASGEHESSRRVKSELLVQVDGVNN+ T +DG+RKIVMVLAATNFPWDIDEALRRRLEKRI
Sbjct: 346 ASGEHESSRRVKSELLVQVDGVNNTGTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRI 405
Query: 350 YIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKI 171
YIPLPNFESRKELIRINLKTVEVAADV+IDEVARRTEGYSGDDLTNVCRDASLNGMRRKI
Sbjct: 406 YIPLPNFESRKELIRINLKTVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKI 465
Query: 170 AGKTRDEIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 6
AGKTRDEIK+MSK++++KDP+AMCDFEEA++KVQRSVS ADIE+HEKWFSEFGSA
Sbjct: 466 AGKTRDEIKNMSKDEISKDPVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520
>ref|XP_004135829.1| PREDICTED: katanin p60 ATPase-containing subunit A1-like [Cucumis
sativus] gi|449520561|ref|XP_004167302.1| PREDICTED:
katanin p60 ATPase-containing subunit A1-like [Cucumis
sativus]
Length = 521
Score = 811 bits (2094), Expect = 0.0
Identities = 415/529 (78%), Positives = 448/529 (84%)
Frame = -3
Query: 1592 TLSGLQDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLTRSKWMNCKKALTE 1413
TL G QDHLKLAR+YA EGLYDTSIIFFDG IAQINKHLST+DDPL R+KWM KKAL+E
Sbjct: 5 TLVGFQDHLKLAREYALEGLYDTSIIFFDGVIAQINKHLSTVDDPLMRAKWMTVKKALSE 64
Query: 1412 EIEIVKQLDGERRALKESLGNNNNRRPTSPPITTKGSFVFQPLDEYPTSSNAPPIDDPDV 1233
EIE+VKQLD ER+A KE+ RR SPPI K SFVFQPLDEYPTSS APP+DDPDV
Sbjct: 65 EIEVVKQLDAERKAFKET---PMGRRAASPPIHAKSSFVFQPLDEYPTSS-APPMDDPDV 120
Query: 1232 WAPPNRDIGSRRPTRTNQMSIRKSPSDATWXXXXXXXXXXXXXXXXXXXXGNNSRSGSGV 1053
W PP+RD SRRP R Q+ +RKSP D W +SR+ SGV
Sbjct: 121 WRPPSRDSSSRRPARAGQVGMRKSPQDGAWARGSTTRPNTTARGAKAG---GSSRANSGV 177
Query: 1052 RASTASGTXXXXXXXXXXXXXXXXXGIGDAEEGKTKRLQYEGPDPELAAMLERDVLETSP 873
RASTA GD ++GK+K+ QYEGPDP+LAAMLERDVLETSP
Sbjct: 178 RASTAGKKSSGATGKSSKSDSAN----GD-DDGKSKKGQYEGPDPDLAAMLERDVLETSP 232
Query: 872 GIRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVAT 693
G+RWDDVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVAT
Sbjct: 233 GVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVAT 292
Query: 692 ECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHE 513
ECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHE
Sbjct: 293 ECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHE 352
Query: 512 SSRRVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPN 333
SSRRVKSELLVQVDGVNNSS+G+DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPN
Sbjct: 353 SSRRVKSELLVQVDGVNNSSSGEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPN 412
Query: 332 FESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRD 153
FESRKELIRINLKTVEVA DVNID+VARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRD
Sbjct: 413 FESRKELIRINLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRD 472
Query: 152 EIKSMSKEDMAKDPIAMCDFEEAISKVQRSVSPADIERHEKWFSEFGSA 6
EI++M+K+D++KDP+AMCDFEEA+ KVQRSVS ADIERHEKWFSEFGSA
Sbjct: 473 EIRNMAKDDISKDPVAMCDFEEALKKVQRSVSAADIERHEKWFSEFGSA 521